KCC001409A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001409A_C01 KCC001409A_c01
tccgtcgccaagcacatggtggcggtgtcgaccaacctgaagctggtcaaggagttcggc
atcgaccccgagaatgcgttTGGCTTCTGGGACTGGGTGGGCGGCCGCTACTCGGTGTGC
TCGGCCGTGGGCATGCTGCCGCTGTCGCTGCAGTACGGCTTCGACCTGATGCAGGAGTTC
CTTGCTGGTGCCAACAACATCGACGAGCACTTCAAGAACCAGCCCTACCAGGACAACCTG
CCGGTGCTCATGGGCCTGACGTCGCTGTGGAACGTGTCCTTCCTGGGCCACGGCGCGAAG
GCCATCCTGCCCTACTGCCAGGCTCTGTCGAAGCTGGCGCCCCACATTCAGCAGGTGGAC
ATGGAGTCCAACGGCAAGGGCGTGGACATTAACGGCGTGCGCCTGCCCTTCGAGACCGGC
GAGATCGATTTCGGTGAGCCCGGCACCAACGGCCAGCACTCGTTCTACCAGCTCATCCAC
CAGGGCCGCGTGGTGCCCTGCGAGTTCATCGGCATTGTGCGCAGCCAGCAGTCGGTGTAC
CTGAAGGGCGAGGTGGTGTCCAACCACGACGAGCTCATGTGCAACTTCTTCGCTCAGGCC
GACGCCCTGGCGTACGGCAAGACGCCGGAGCAGCTGCGCTCGGACAACGTGCCCGACTAC
CTCATCCCCCACCGCGTCTTCACCGGCAACCGCCCCAGCATGAGCATTATGCTGCCCAGC
TGCACCGCCTACACCGTGGGCCAGCTGCTTGCCATCTACGAGCATCGCATCGCCGTGCAG
GGCTTTATCTGGAACATCAACTCGTTCGACCAGTGGGGCGTGGAGCTGGGCAAGGTGCTT
GCCTCGAAGGTGCGCACCGTGATGAACAGCGCCCGCACGCGGGACCGCAAGATCCTGCCG
CAGGACGGCTTCAACTACAGCACCACCCGCATGATCAACAAGTACCTGGAGGGCAAGACG
CAGGTGCTCTACCCCGAGGGGCACGACACGTTCCCCATCGACATGCTGCGTGGCGGGCAC
TAAACCCGCCGCCGCAGAGCAGCCGGCGATGGTGGCGACGGCGGGGAGCGGCGGGATCTG
GCGGAGGCTTAGCACAGCAGCTAATTGTGGCTACAGGATGTGGGGCAGCAGCCGGGGGGT
TGATGAGCATGCAGCGCATGCCCGTTCCAGCAAATTGCTGGCGGCGCGTGGCTGTACGCA
TTCAGGCGCATGTGCTGTGGGGGGGCAGAGCCCTGGTGTGCGCATGAATAGAAAGTTGTC
ATTTGCGCATGGCGCCTTGAGGGTTGTGCCCAGTTGATTGGGACTTGGGCGGTTGGTCGA
CGCATGGCCGGGAACGGCAAGGGCGGGAGGACGCCGGCAATCCGCGCGTAGGAGGAACAG
CCCTGCCCCCGGGAGGCGGCAGCAGCGGCAGCCCTCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001409A_C01 KCC001409A_c01
         (1418 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q9FXM4|G6PI_ARALP Glucose-6-phosphate isomerase, cytosolic (G...   502  e-141
sp|Q9FXM5|G6PI_ARAGE Glucose-6-phosphate isomerase, cytosolic (G...   502  e-141
dbj|BAB17646.1| cytosolic phosphoglucose isomerase [Arabidopsis ...   501  e-141
dbj|BAB17635.1| cytosolic phosphoglucose isomerase [Arabidopsis ...   501  e-141
dbj|BAB17636.1| cytosolic phosphoglucose isomerase [Arabidopsis ...   501  e-141

>sp|Q9FXM4|G6PI_ARALP Glucose-6-phosphate isomerase, cytosolic (GPI) (Phosphoglucose
            isomerase) (PGI) (Phosphohexose isomerase) (PHI)
            gi|11094280|dbj|BAB17656.1| cytosolic phosphoglucose
            isomerase [Arabidopsis lyrata subsp. petraea]
          Length = 560

 Score =  502 bits (1293), Expect = e-141
 Identities = 235/321 (73%), Positives = 283/321 (87%)
 Frame = +1

Query: 1    SVAKHMVAVSTNLKLVKEFGIDPENAFGFWDWVGGRYSVCSAVGMLPLSLQYGFDLMQEF 180
            +VAKHMVAVSTNL LV++FGIDP NAF FWDWVGGRYSVCSAVG+LPLSLQYGF ++++F
Sbjct: 240  AVAKHMVAVSTNLALVEKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSVVEKF 299

Query: 181  LAGANNIDEHFKNQPYQDNLPVLMGLTSLWNVSFLGHGAKAILPYCQALSKLAPHIQQVD 360
            L GA++ID+HF++ P++ N+PVL+GL S+WNVSFLG+ A+AILPY QAL K APHIQQV 
Sbjct: 300  LKGASSIDQHFQSTPFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKFAPHIQQVS 359

Query: 361  MESNGKGVDINGVRLPFETGEIDFGEPGTNGQHSFYQLIHQGRVVPCEFIGIVRSQQSVY 540
            MESNGKGV I+G+ LPFETGEIDFGEPGTNGQHSFYQLIHQGRV+PC+FIGIV+SQQ VY
Sbjct: 360  MESNGKGVSIDGLPLPFETGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGIVKSQQPVY 419

Query: 541  LKGEVVSNHDELMCNFFAQADALAYGKTPEQLRSDNVPDYLIPHRVFTGNRPSMSIMLPS 720
            LKGEVVSNHDELM NFFAQ DALAYGKTPEQL+ +NV + LIPH+ F+GNRPS+S++LP 
Sbjct: 420  LKGEVVSNHDELMSNFFAQPDALAYGKTPEQLQKENVSENLIPHKTFSGNRPSLSLLLPE 479

Query: 721  CTAYTVGQLLAIYEHRIAVQGFIWNINSFDQWGVELGKVLASKVRTVMNSARTRDRKILP 900
             TAY VGQLLAIYEHR+AVQGF+W INSFDQWGVELGKVLA++VR  ++S+RT+   +  
Sbjct: 480  LTAYNVGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKVLATQVRKQLHSSRTQGTAL-- 537

Query: 901  QDGFNYSTTRMINKYLEGKTQ 963
             +GFNYSTT ++ +YLE  ++
Sbjct: 538  -EGFNYSTTTLLKRYLETSSE 557

>sp|Q9FXM5|G6PI_ARAGE Glucose-6-phosphate isomerase, cytosolic (GPI) (Phosphoglucose
            isomerase) (PGI) (Phosphohexose isomerase) (PHI)
          Length = 560

 Score =  502 bits (1292), Expect = e-141
 Identities = 234/321 (72%), Positives = 283/321 (87%)
 Frame = +1

Query: 1    SVAKHMVAVSTNLKLVKEFGIDPENAFGFWDWVGGRYSVCSAVGMLPLSLQYGFDLMQEF 180
            +VAKHMVAVSTNL LV++FGIDP NAF FWDWVGGRYSVCSAVG+LPLSLQYGF ++++F
Sbjct: 240  AVAKHMVAVSTNLALVEKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSVVEKF 299

Query: 181  LAGANNIDEHFKNQPYQDNLPVLMGLTSLWNVSFLGHGAKAILPYCQALSKLAPHIQQVD 360
            L GA++ID+HF++ P++ N+PVL+GL S+WNVSFLG+ A+AILPY QAL K APHIQQV 
Sbjct: 300  LKGASSIDQHFQSTPFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKFAPHIQQVS 359

Query: 361  MESNGKGVDINGVRLPFETGEIDFGEPGTNGQHSFYQLIHQGRVVPCEFIGIVRSQQSVY 540
            MESNGKGV I+G+ LPFETGE+DFGEPGTNGQHSFYQLIHQGRV+PC+FIGIV+SQQ VY
Sbjct: 360  MESNGKGVSIDGLPLPFETGEVDFGEPGTNGQHSFYQLIHQGRVIPCDFIGIVKSQQPVY 419

Query: 541  LKGEVVSNHDELMCNFFAQADALAYGKTPEQLRSDNVPDYLIPHRVFTGNRPSMSIMLPS 720
            LKGEVVSNHDELM NFFAQ DALAYGKTPEQL+ +NV + LIPH+ F+GNRPS+S++LP 
Sbjct: 420  LKGEVVSNHDELMSNFFAQPDALAYGKTPEQLQKENVSENLIPHKTFSGNRPSLSLLLPE 479

Query: 721  CTAYTVGQLLAIYEHRIAVQGFIWNINSFDQWGVELGKVLASKVRTVMNSARTRDRKILP 900
             TAY VGQLLAIYEHR+AVQGF+W INSFDQWGVELGKVLA++VR  ++S+RT+   +  
Sbjct: 480  LTAYNVGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKVLATQVRKQLHSSRTQGTAL-- 537

Query: 901  QDGFNYSTTRMINKYLEGKTQ 963
             +GFNYSTT ++ +YLE  ++
Sbjct: 538  -EGFNYSTTTLLKRYLETSSE 557

>dbj|BAB17646.1| cytosolic phosphoglucose isomerase [Arabidopsis thaliana]
          Length = 560

 Score =  501 bits (1291), Expect = e-141
 Identities = 235/321 (73%), Positives = 282/321 (87%)
 Frame = +1

Query: 1    SVAKHMVAVSTNLKLVKEFGIDPENAFGFWDWVGGRYSVCSAVGMLPLSLQYGFDLMQEF 180
            +VAKHMVAVSTNL LV++FGIDP NAF FWDWVGGRYSVCSAVG+LPLSLQYGF ++++F
Sbjct: 240  AVAKHMVAVSTNLALVEKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSMVEKF 299

Query: 181  LAGANNIDEHFKNQPYQDNLPVLMGLTSLWNVSFLGHGAKAILPYCQALSKLAPHIQQVD 360
            L GA++ID+HF++ P++ N+PVL+GL S+WNVSFLG+ A+AILPY QAL K APHIQQV 
Sbjct: 300  LKGASSIDQHFQSTPFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKFAPHIQQVS 359

Query: 361  MESNGKGVDINGVRLPFETGEIDFGEPGTNGQHSFYQLIHQGRVVPCEFIGIVRSQQSVY 540
            MESNGKGV I+G+ LPFETGEIDFGEPGTNGQHSFYQLIHQGRV+PC+FIGIV+SQQ VY
Sbjct: 360  MESNGKGVSIDGLPLPFETGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGIVKSQQPVY 419

Query: 541  LKGEVVSNHDELMCNFFAQADALAYGKTPEQLRSDNVPDYLIPHRVFTGNRPSMSIMLPS 720
            LKGEVVSNHDELM NFFAQ DALAYGKTPEQL+ +NV + LIPH+ F+GNRPS+S++LP 
Sbjct: 420  LKGEVVSNHDELMSNFFAQPDALAYGKTPEQLQKENVSENLIPHKTFSGNRPSLSLLLPE 479

Query: 721  CTAYTVGQLLAIYEHRIAVQGFIWNINSFDQWGVELGKVLASKVRTVMNSARTRDRKILP 900
             TAY VGQLLAIYEHR+AVQGF+W INSFDQWGVELGKVLA++VR  ++S+RT+      
Sbjct: 480  LTAYNVGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKVLATQVRKQLHSSRTQG---TA 536

Query: 901  QDGFNYSTTRMINKYLEGKTQ 963
             +GFNYSTT ++ +YLE  ++
Sbjct: 537  PEGFNYSTTTLLKRYLETSSE 557

>dbj|BAB17635.1| cytosolic phosphoglucose isomerase [Arabidopsis thaliana]
            gi|11094244|dbj|BAB17640.1| cytosolic phosphoglucose
            isomerase [Arabidopsis thaliana]
          Length = 560

 Score =  501 bits (1291), Expect = e-141
 Identities = 235/321 (73%), Positives = 282/321 (87%)
 Frame = +1

Query: 1    SVAKHMVAVSTNLKLVKEFGIDPENAFGFWDWVGGRYSVCSAVGMLPLSLQYGFDLMQEF 180
            +VAKHMVAVSTNL LV++FGIDP NAF FWDWVGGRYSVCSAVG+LPLSLQYGF ++++F
Sbjct: 240  AVAKHMVAVSTNLALVEKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSMVEKF 299

Query: 181  LAGANNIDEHFKNQPYQDNLPVLMGLTSLWNVSFLGHGAKAILPYCQALSKLAPHIQQVD 360
            L GA++ID+HF++ P++ N+PVL+GL S+WNVSFLG+ A+AILPY QAL K APHIQQV 
Sbjct: 300  LKGASSIDQHFQSTPFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKFAPHIQQVS 359

Query: 361  MESNGKGVDINGVRLPFETGEIDFGEPGTNGQHSFYQLIHQGRVVPCEFIGIVRSQQSVY 540
            MESNGKGV I+G+ LPFETGEIDFGEPGTNGQHSFYQLIHQGRV+PC+FIGIV+SQQ VY
Sbjct: 360  MESNGKGVSIDGLPLPFETGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGIVKSQQPVY 419

Query: 541  LKGEVVSNHDELMCNFFAQADALAYGKTPEQLRSDNVPDYLIPHRVFTGNRPSMSIMLPS 720
            LKGEVVSNHDELM NFFAQ DALAYGKTPEQL+ +NV + LIPH+ F+GNRPS+S++LP 
Sbjct: 420  LKGEVVSNHDELMSNFFAQPDALAYGKTPEQLQKENVSENLIPHKTFSGNRPSLSLLLPE 479

Query: 721  CTAYTVGQLLAIYEHRIAVQGFIWNINSFDQWGVELGKVLASKVRTVMNSARTRDRKILP 900
             TAY VGQLLAIYEHR+AVQGF+W INSFDQWGVELGKVLA++VR  ++S+RT+      
Sbjct: 480  LTAYNVGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKVLATQVRKQLHSSRTQG---TA 536

Query: 901  QDGFNYSTTRMINKYLEGKTQ 963
             +GFNYSTT ++ +YLE  ++
Sbjct: 537  PEGFNYSTTTLLKRYLETSSE 557

>dbj|BAB17636.1| cytosolic phosphoglucose isomerase [Arabidopsis thaliana]
          Length = 560

 Score =  501 bits (1291), Expect = e-141
 Identities = 235/321 (73%), Positives = 282/321 (87%)
 Frame = +1

Query: 1    SVAKHMVAVSTNLKLVKEFGIDPENAFGFWDWVGGRYSVCSAVGMLPLSLQYGFDLMQEF 180
            +VAKHMVAVSTNL LV++FGIDP NAF FWDWVGGRYSVCSAVG+LPLSLQYGF ++++F
Sbjct: 240  AVAKHMVAVSTNLALVEKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSMVEKF 299

Query: 181  LAGANNIDEHFKNQPYQDNLPVLMGLTSLWNVSFLGHGAKAILPYCQALSKLAPHIQQVD 360
            L GA++ID+HF++ P++ N+PVL+GL S+WNVSFLG+ A+AILPY QAL K APHIQQV 
Sbjct: 300  LKGASSIDQHFQSTPFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKFAPHIQQVS 359

Query: 361  MESNGKGVDINGVRLPFETGEIDFGEPGTNGQHSFYQLIHQGRVVPCEFIGIVRSQQSVY 540
            MESNGKGV I+G+ LPFETGEIDFGEPGTNGQHSFYQLIHQGRV+PC+FIGIV+SQQ VY
Sbjct: 360  MESNGKGVSIDGLPLPFETGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGIVKSQQPVY 419

Query: 541  LKGEVVSNHDELMCNFFAQADALAYGKTPEQLRSDNVPDYLIPHRVFTGNRPSMSIMLPS 720
            LKGEVVSNHDELM NFFAQ DALAYGKTPEQL+ +NV + LIPH+ F+GNRPS+S++LP 
Sbjct: 420  LKGEVVSNHDELMSNFFAQPDALAYGKTPEQLQKENVSENLIPHKTFSGNRPSLSLLLPE 479

Query: 721  CTAYTVGQLLAIYEHRIAVQGFIWNINSFDQWGVELGKVLASKVRTVMNSARTRDRKILP 900
             TAY VGQLLAIYEHR+AVQGF+W INSFDQWGVELGKVLA++VR  ++S+RT+      
Sbjct: 480  LTAYNVGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKVLATQVRKQLHSSRTQG---TA 536

Query: 901  QDGFNYSTTRMINKYLEGKTQ 963
             +GFNYSTT ++ +YLE  ++
Sbjct: 537  PEGFNYSTTTLLKRYLETSSE 557



EST assemble image


clone accession position
1 LCL087h04_r AV631032 1 522
2 MXL089g12_r BP098234 186 637
3 MXL056g11_r BP096326 231 581
4 HCL019e06_r AV640631 329 648
5 CM045h07_r AV389729 398 945
6 CM099f03_r AV393153 712 1241
7 CM092b07_r AV392688 831 1358
8 LC047d07_r AV622038 876 1418




Chlamydomonas reinhardtii
Kazusa DNA Research Institute