Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001401A_C01 KCC001401A_c01
(479 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C45219 N-methyl-D-aspartate receptor chain NMDAR2D-1 - rat 51 6e-06
dbj|BAA02500.1| N-methyl-D-aspartate receptor subunit [Rattus no... 51 6e-06
sp|Q62645|NME4_RAT Glutamate [NMDA] receptor subunit epsilon 4 p... 51 6e-06
pir||S27224 N-methyl-D-aspartate receptor epsilon-4 chain - mouse 51 6e-06
gb|AAC37646.1| NMDA receptor subunit NR2D 51 6e-06
>pir||C45219 N-methyl-D-aspartate receptor chain NMDAR2D-1 - rat
Length = 1356
Score = 51.2 bits (121), Expect = 6e-06
Identities = 48/144 (33%), Positives = 55/144 (37%), Gaps = 15/144 (10%)
Frame = -2
Query: 478 PATAC*ARAPAPARRRTRPRRRTARREWRRRAATE*PWAAA-------------PQPGCG 338
P+ A A P P PR R A WRR T P AA PQ G G
Sbjct: 913 PSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTGPPGGAAIADGFHRYYGPIEPQ-GLG 971
Query: 337 TERCRPWPGTPASPQGPPGTPWPPGRTGGPPQYEQPEGMSGKHRQRP--QPAGSREGFPW 164
R A+P+G G P P T PPQ P + Q P PAG+ GFP
Sbjct: 972 LGEAR------AAPRGAAGRPLSPPTT-QPPQKPPPSYFAIVREQEPTEPPAGAFPGFP- 1023
Query: 163 HLPERRAPPGPAERASGAALGPLC 92
+PP P A+ A PLC
Sbjct: 1024 ------SPPAPPAAAAAAVGPPLC 1041
>dbj|BAA02500.1| N-methyl-D-aspartate receptor subunit [Rattus norvegicus]
Length = 1356
Score = 51.2 bits (121), Expect = 6e-06
Identities = 48/144 (33%), Positives = 55/144 (37%), Gaps = 15/144 (10%)
Frame = -2
Query: 478 PATAC*ARAPAPARRRTRPRRRTARREWRRRAATE*PWAAA-------------PQPGCG 338
P+ A A P P PR R A WRR T P AA PQ G G
Sbjct: 913 PSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTGPPGGAAIADGFHRYYGPIEPQ-GLG 971
Query: 337 TERCRPWPGTPASPQGPPGTPWPPGRTGGPPQYEQPEGMSGKHRQRP--QPAGSREGFPW 164
R A+P+G G P P T PPQ P + Q P PAG+ GFP
Sbjct: 972 LGEAR------AAPRGAAGRPLSPPTT-QPPQKPPPSYFAIVREQEPTEPPAGAFPGFP- 1023
Query: 163 HLPERRAPPGPAERASGAALGPLC 92
+PP P A+ A PLC
Sbjct: 1024 ------SPPAPPAAAAAAVGPPLC 1041
>sp|Q62645|NME4_RAT Glutamate [NMDA] receptor subunit epsilon 4 precursor (N-methyl
D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D)
Length = 1323
Score = 51.2 bits (121), Expect = 6e-06
Identities = 48/144 (33%), Positives = 55/144 (37%), Gaps = 15/144 (10%)
Frame = -2
Query: 478 PATAC*ARAPAPARRRTRPRRRTARREWRRRAATE*PWAAA-------------PQPGCG 338
P+ A A P P PR R A WRR T P AA PQ G G
Sbjct: 913 PSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTGPPGGAAIADGFHRYYGPIEPQ-GLG 971
Query: 337 TERCRPWPGTPASPQGPPGTPWPPGRTGGPPQYEQPEGMSGKHRQRP--QPAGSREGFPW 164
R A+P+G G P P T PPQ P + Q P PAG+ GFP
Sbjct: 972 LGEAR------AAPRGAAGRPLSPPTT-QPPQKPPPSYFAIVREQEPTEPPAGAFPGFP- 1023
Query: 163 HLPERRAPPGPAERASGAALGPLC 92
+PP P A+ A PLC
Sbjct: 1024 ------SPPAPPAAAAAAVGPPLC 1041
>pir||S27224 N-methyl-D-aspartate receptor epsilon-4 chain - mouse
Length = 1323
Score = 51.2 bits (121), Expect = 6e-06
Identities = 48/144 (33%), Positives = 55/144 (37%), Gaps = 15/144 (10%)
Frame = -2
Query: 478 PATAC*ARAPAPARRRTRPRRRTARREWRRRAATE*PWAAA-------------PQPGCG 338
P+ A A P P PR R A WRR T P AA PQ G G
Sbjct: 913 PSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTGPPGGAALADGFHRYYGPIEPQ-GLG 971
Query: 337 TERCRPWPGTPASPQGPPGTPWPPGRTGGPPQYEQPEGMSGKHRQRP--QPAGSREGFPW 164
R A+P+G G P P T PPQ P + Q P PAG+ GFP
Sbjct: 972 LGEAR------AAPRGAAGRPLSPPTT-QPPQKPPPSYFAIVREQEPAEPPAGAFPGFP- 1023
Query: 163 HLPERRAPPGPAERASGAALGPLC 92
+PP P A+ A PLC
Sbjct: 1024 ------SPPAPPAAAAAAVGPPLC 1041
>gb|AAC37646.1| NMDA receptor subunit NR2D
Length = 1323
Score = 51.2 bits (121), Expect = 6e-06
Identities = 48/144 (33%), Positives = 55/144 (37%), Gaps = 15/144 (10%)
Frame = -2
Query: 478 PATAC*ARAPAPARRRTRPRRRTARREWRRRAATE*PWAAA-------------PQPGCG 338
P+ A A P P PR R A WRR T P AA PQ G G
Sbjct: 913 PSPAYPAARPPPGPAPFVPRERAAADRWRRAKGTGPPGGAAIADGFHRYYGPIEPQ-GLG 971
Query: 337 TERCRPWPGTPASPQGPPGTPWPPGRTGGPPQYEQPEGMSGKHRQRP--QPAGSREGFPW 164
R A+P+G G P P T PPQ P + Q P PAG+ GFP
Sbjct: 972 LGEAR------AAPRGAAGRPLSPPTT-QPPQKPPPSYFAIVREQEPTEPPAGAFPGFP- 1023
Query: 163 HLPERRAPPGPAERASGAALGPLC 92
+PP P A+ A PLC
Sbjct: 1024 ------SPPAPPAAAAAAVGPPLC 1041
