Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001395A_C01 KCC001395A_c01
(708 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00060738.1| COG1376: Uncharacterized protein conserved in... 67 4e-10
pir||T08150 chitinase (EC 3.2.1.14) - Volvox carteri f. nagarien... 64 2e-09
ref|NP_809490.1| LysM-repeat proteins and domains [Bacteroides t... 57 4e-07
ref|ZP_00060737.1| COG1376: Uncharacterized protein conserved in... 56 5e-07
ref|NP_623767.1| LysM-repeat proteins and domains [Thermoanaerob... 55 1e-06
>ref|ZP_00060738.1| COG1376: Uncharacterized protein conserved in bacteria [Clostridium
thermocellum ATCC 27405]
Length = 289
Score = 66.6 bits (161), Expect = 4e-10
Identities = 39/124 (31%), Positives = 59/124 (47%)
Frame = +3
Query: 102 AASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRD 281
A PY ++ GDTL IA K + TV IL NP + P K+ GQ I +P K +
Sbjct: 67 ACPIGTSPYEIKSGDTLSKIAAKFNTTVGDILNANPGIIPEKLYVGQKICIPQPKSENPG 126
Query: 282 REILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 461
T Y I+ G+TL + ++ + + NPG++ A+ QVI +P+
Sbjct: 127 -------CPTMNYYVIQKGDTLPAIAKIFNVTVQQLINANPGINPNALYVGQVICIPVAP 179
Query: 462 FTVR 473
+VR
Sbjct: 180 SSVR 183
Score = 58.9 bits (141), Expect = 7e-08
Identities = 38/112 (33%), Positives = 61/112 (53%)
Frame = +3
Query: 126 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 305
YT+R GDTL IA + + TV+ IL NP + P ++ GQ I +P + + IG
Sbjct: 16 YTVRAGDTLYLIAGRFNTTVEAILAANPGIVPERLYIGQVICVPYA----QPPQPACPIG 71
Query: 306 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 461
T+ Y I++G+TLS++ +K + + L NPG+ + + Q I +P K
Sbjct: 72 TS--PYEIKSGDTLSKIAAKFNTTVGDILNANPGIIPEKLYVGQKICIPQPK 121
Score = 48.9 bits (115), Expect = 8e-05
Identities = 34/104 (32%), Positives = 51/104 (48%), Gaps = 10/104 (9%)
Frame = +3
Query: 126 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI- 302
Y ++KGDTL +IAK +VTV Q++ NP + P + GQ I +P S R I+ I
Sbjct: 133 YVIQKGDTLPAIAKIFNVTVQQLINANPGINPNALYVGQVICIPVAPSSVR---IIVSIA 189
Query: 303 ---------GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPG 407
G + YP+ G+ + + RG T ++NPG
Sbjct: 190 AKTLSLYRDGRLVKSYPVATGKPTTP--TPRGTFTIINKQVNPG 231
>pir||T08150 chitinase (EC 3.2.1.14) - Volvox carteri f. nagariensis
gi|3047413|gb|AAC13727.1| chitinase [Volvox carteri f.
nagariensis]
Length = 309
Score = 63.9 bits (154), Expect = 2e-09
Identities = 40/118 (33%), Positives = 59/118 (49%), Gaps = 9/118 (7%)
Frame = +3
Query: 126 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 305
YT++ GDT +IA++R TVD I +NP V P ++ GQ I +P GG G
Sbjct: 42 YTIQPGDTFWAIAQRRGTTVDVIQSLNPGVVPTRLQVGQVINVPCS----------GGGG 91
Query: 306 TTYR---------VYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 452
+T Y I+ G+T + +RG + D LNPGV+ ++ QVI +P
Sbjct: 92 STPTSTAPPARGCTYTIQPGDTFWAIAQRRGTTVDVIQSLNPGVNPARLQVGQVINVP 149
>ref|NP_809490.1| LysM-repeat proteins and domains [Bacteroides thetaiotaomicron
VPI-5482] gi|29337881|gb|AAO75684.1| LysM-repeat
proteins and domains [Bacteroides thetaiotaomicron
VPI-5482]
Length = 588
Score = 56.6 bits (135), Expect = 4e-07
Identities = 37/112 (33%), Positives = 60/112 (53%)
Frame = +3
Query: 126 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 305
+T+ KG +L SIAK +VT + I+ +NP K+ GQ I +P K S + G
Sbjct: 32 HTIEKGQSLYSIAKMYNVTTNDIIRLNPGCDE-KIYAGQAIKIPKGKESQK--------G 82
Query: 306 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 461
T+ + I+AGETL ++ + IS NPG+ + + QVI +P+++
Sbjct: 83 ETF--HTIQAGETLYKLTTIYNISAKAICEANPGLSAENFRIGQVILIPLEQ 132
Score = 37.0 bits (84), Expect = 0.30
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Frame = +3
Query: 126 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDRE------ 287
+T++ G+TL + +++ I NP + GQ IL+P ++ + +
Sbjct: 86 HTIQAGETLYKLTTIYNISAKAICEANPGLSAENFRIGQVILIPLEQEQETETAQAPAEK 145
Query: 288 --ILGGIGTTYR-VYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPID 458
I G + + + ++ ++ ET+ V + GIS E + NP + K +K Q + +P
Sbjct: 146 PAIQGPVQSRCKDMHKVKRKETVFSVSREYGISEQELIAANPEL-KKGMKKGQYLCIPYP 204
Query: 459 KFTVRE 476
T +
Sbjct: 205 SATTMQ 210
Score = 35.8 bits (81), Expect = 0.67
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 309 TYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 461
+Y ++ I G++L + ++T++ +RLNPG D K + Q IK+P K
Sbjct: 28 SYFLHTIEKGQSLYSIAKMYNVTTNDIIRLNPGCDEK-IYAGQAIKIPKGK 77
>ref|ZP_00060737.1| COG1376: Uncharacterized protein conserved in bacteria [Clostridium
thermocellum ATCC 27405]
Length = 230
Score = 56.2 bits (134), Expect = 5e-07
Identities = 34/111 (30%), Positives = 56/111 (49%)
Frame = +3
Query: 123 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 302
PYT++ GDTL +IA+ TV I+ NPD+ P + GQ I +P +I
Sbjct: 15 PYTIKAGDTLAAIARIYGTTVQDIINANPDIDPYYLRVGQQICIPL------TMQIYPSC 68
Query: 303 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPI 455
TT Y +R +TL + + I+ + L N G+D + +Q++ +P+
Sbjct: 69 PTT-NYYVVRPEDTLESIAAYFNITPQQLLYSNYGIDPTDLYVDQILCIPV 118
>ref|NP_623767.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis]
gi|20517226|gb|AAM25371.1| LysM-repeat proteins and
domains [Thermoanaerobacter tengcongensis]
Length = 324
Score = 55.1 bits (131), Expect = 1e-06
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 2/168 (1%)
Frame = +3
Query: 84 QRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQ 263
QRL++ YT++ GDT+ SIA+K +V + I+ IN P + GQ + +P
Sbjct: 46 QRLIIPVQG---NYYTVQPGDTVYSIAQKFNVPYESIIYINNLSYPYNIYPGQRLFIPGI 102
Query: 264 KLSDRDREI--LGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQ 437
++ + + G + Y ++ G+TL + K GIS DE +R N V+ + Q
Sbjct: 103 SMNYPPSPVPPIPSSGPCPKYYTVQPGDTLWSIAQKFGISIDELIRANYLVNPGMIYPGQ 162
Query: 438 VIKLPIDKFTVREREMLIGSGILPPEFFHAAKNPFVIGLGGLMLVCGF 581
+ +P E P + PFV+ L + GF
Sbjct: 163 TLIIPCPSTPPVEY----------PTLRLGDRGPFVVNLQARLKSLGF 200
