Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001389A_C01 KCC001389A_c01
(580 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565149.2| thylakoid lumenal 29.8 kDa protein [Arabidopsis... 137 1e-31
sp|O49292|TL30_ARATH Thylakoid lumenal 29.8 kDa protein, chlorop... 128 7e-29
gb|AAK49577.1|AF370571_1 Unknown protein [Arabidopsis thaliana] 99 3e-20
ref|ZP_00016151.1| COG0621: 2-methylthioadenine synthetase [Rhod... 45 7e-04
pir||S24169 mucin - rat 44 0.001
>ref|NP_565149.2| thylakoid lumenal 29.8 kDa protein [Arabidopsis thaliana]
Length = 260
Score = 137 bits (345), Expect = 1e-31
Identities = 74/137 (54%), Positives = 93/137 (67%), Gaps = 6/137 (4%)
Frame = +1
Query: 187 SVAASLALSGTVALP------ANAVQGLTAGRIPGRTKEPDAEGFYTYTRPEGKSGGHGV 348
SV AS +S T AL A QGL AGR+PG + EPD EG+ TY RP+ KSGGHGV
Sbjct: 50 SVMASGLVSSTTALAFPREGLAVVKQGLLAGRVPGLS-EPDEEGWRTYRRPDEKSGGHGV 108
Query: 349 GWSEIPQYSFKVPAGWDEIPVSIADLGGTEIDLRYQAKEQGDVAVVVAPVLRFMDVGFNA 528
GWS I Y+F VP W+E+PVSIADLGGTEIDLR+ + ++G ++V+VAPVLRF D
Sbjct: 109 GWSPIIPYAFSVPQDWNEVPVSIADLGGTEIDLRFASPKEGRLSVIVAPVLRFAD-NLGD 167
Query: 529 KVTLKEVGPPQRVIEGF 579
V ++ +G P +VI F
Sbjct: 168 DVKIENIGQPAKVINAF 184
>sp|O49292|TL30_ARATH Thylakoid lumenal 29.8 kDa protein, chloroplast precursor
gi|25406489|pir||G96799 hypothetical protein F22K20.16
[imported] - Arabidopsis thaliana
gi|2829916|gb|AAC00624.1| Unknown protein [Arabidopsis
thaliana]
Length = 274
Score = 128 bits (321), Expect = 7e-29
Identities = 74/152 (48%), Positives = 93/152 (60%), Gaps = 21/152 (13%)
Frame = +1
Query: 187 SVAASLALSGTVALP------ANAVQGLTAGRIPGRTKEPDAEGFY-------------- 306
SV AS +S T AL A QGL AGR+PG + EPD EG +
Sbjct: 49 SVMASGLVSSTTALAFPREGLAVVKQGLLAGRVPGLS-EPDEEGSFHSVLDSSSSCLALT 107
Query: 307 -TYTRPEGKSGGHGVGWSEIPQYSFKVPAGWDEIPVSIADLGGTEIDLRYQAKEQGDVAV 483
TY RP+ KSGGHGVGWS I Y+F VP W+E+PVSIADLGGTEIDLR+ + ++G ++V
Sbjct: 108 LTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLGGTEIDLRFASPKEGRLSV 167
Query: 484 VVAPVLRFMDVGFNAKVTLKEVGPPQRVIEGF 579
+VAPVLRF D V ++ +G P +VI F
Sbjct: 168 IVAPVLRFAD-NLGDDVKIENIGQPAKVINAF 198
>gb|AAK49577.1|AF370571_1 Unknown protein [Arabidopsis thaliana]
Length = 253
Score = 99.4 bits (246), Expect = 3e-20
Identities = 55/116 (47%), Positives = 70/116 (59%)
Frame = +1
Query: 232 ANAVQGLTAGRIPGRTKEPDAEGFYTYTRPEGKSGGHGVGWSEIPQYSFKVPAGWDEIPV 411
A+ QGL AGR G EPD EG+ TY RP+ K GGHG GW I Y+F +E P
Sbjct: 70 ADVKQGLLAGRETG-LNEPDEEGWRTYRRPDEKLGGHGDGWRTIIPYAFAGAEDCNEAPA 128
Query: 412 SIADLGGTEIDLRYQAKEQGDVAVVVAPVLRFMDVGFNAKVTLKEVGPPQRVIEGF 579
SIADL GTE+D R + +Q ++V+VAPVLRF D V ++ +G P +VI F
Sbjct: 129 SIADLAGTEMDWRCGSPKQARLSVIVAPVLRFAD-NLGDDVKIENIGQPAKVINAF 183
>ref|ZP_00016151.1| COG0621: 2-methylthioadenine synthetase [Rhodospirillum rubrum]
Length = 540
Score = 45.1 bits (105), Expect = 7e-04
Identities = 39/114 (34%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Frame = -1
Query: 556 GARPPSASLSR*SRHP*NAARAPPPPPHRPAP---WPGSAGQSRCRPGRRWTREFHPSQQ 386
G R PS S R + +R PPP RP+P +P + RC P R R P
Sbjct: 397 GRRRPSRSSCRAPSPSPSRSRFRRPPPSRPSPSRPFPSRLRRRRCHPPPR-RRRPRPRPS 455
Query: 385 AP*SCTAGSRSSPRRARPTCPRAACTCRSPRRQAPWSGLEYVQQSGLARHLQAA 224
P +C RSSPRR+RP R RS + +P SG + Q +R A+
Sbjct: 456 FPRAC---PRSSPRRSRPRRRR-----RSFPKPSPSSGRRFFQNQWPSRSRSAS 501
Score = 34.3 bits (77), Expect = 1.3
Identities = 33/100 (33%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Frame = -1
Query: 574 PR*RAAGARPPSASLSR*SRHP*NAARAPPPPPHRPAPWPGSAGQSRCRPGRRWTREFHP 395
P R + +RP + L R HP R P P P P P S+ + R RP RR R P
Sbjct: 422 PPSRPSPSRPFPSRLRRRRCHPPPRRRRPRPRPSFPRACPRSSPR-RSRPRRR--RRSFP 478
Query: 394 SQQAP*SCTAGSRSSPRRAR-PTCPRAACTCRSPRRQAPW 278
P R+R + P A CR PR A W
Sbjct: 479 KPSPSSGRRFFQNQWPSRSRSASSPGCAAVCRGPR--ASW 516
>pir||S24169 mucin - rat
Length = 292
Score = 44.3 bits (103), Expect = 0.001
Identities = 41/130 (31%), Positives = 56/130 (42%), Gaps = 4/130 (3%)
Frame = -3
Query: 551 PTSFSVTFALKPTSMKRSTGATTTATSPCSLAW*RRS--ISVPPRSAMDTGISSQPAGTL 378
PTS S TS K TG++T TSP + + S +S P + T ++ GT
Sbjct: 91 PTSTSTVPTTGSTSSKPPTGSSTPITSPSTPSPPTESTTLSSTPVTTTATSSTTSSPGTT 150
Query: 377 KLYCGISLQPT-PCPPDLPSG-RVYV*KPSASGSLVRPGIRPAVRPCTAFAGSATVPESA 204
+ S+ T P PP SG P++S + P P T+ S TVP S
Sbjct: 151 SPFATSSVSSTPPSPPSSTSGPTTSSGMPTSSKTTTGPTSPTTRPPSTSTPTSPTVPTST 210
Query: 203 NEAATERRAS 174
EA T+ R S
Sbjct: 211 TEAITQTRLS 220
