KCC001387A_c03
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001387A_C03 KCC001387A_c03
CAGCAGTGTGTTTTAACCATGGAAGTAGCTGGGGCACCCAGCAGCCAAGCGGGAGGCGGA
GAGCTGGTCATCCGTCAATATTGCGGAACCAATTCGCCGGTGAACCCAATCAAGGCTCAG
ATTCTTCAATACAAGCTGGCAAAGGCGGAGGCGGAGGCGAAGGACGCGGAGGAGTCCCTT
GCCGCGAACCGCACGCTCAACAAAATTCGGGTGGCAGAGGCGAAGGCGGACTTAGCCGCG
TATCGCAAGAGACTCAACCGTCGAGCTGCCACTGCAGTGGCGGAGGCGAAGGCGGACTTA
GCCGCGCATCGCAAGCGACTCAACAATCGGGTGGCGGAGGCGGCAGAGGCGGCGGAGGCG
GCCCGGCGGGCGCGCGCGGCAGCTGCACTGGCGACGGCTGCACCGCCGCCACGCGACACT
TCAGGTGGCCAAACCAGGGACGAGGACATCGGCCCCGCCGTAATGAGAGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001387A_C03 KCC001387A_c03
         (470 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAC39319.1| VMP4 protein [Volvox carteri f. nagariensis]           64  1e-09
dbj|BAB62551.1| OSJNBa0089K24.8 [Oryza sativa (japonica cultivar...    64  1e-09
pir||G86292 hypothetical protein F7H2.17 [imported] - Arabidopsi...    64  1e-09
dbj|BAC57890.1| pherophorin [Volvox carteri f. nagariensis]            63  2e-09
dbj|BAC55695.1| putative diaphanous homologue [Oryza sativa (jap...    63  2e-09

>emb|CAC39319.1| VMP4 protein [Volvox carteri f. nagariensis]
          Length = 1143

 Score = 63.5 bits (153), Expect = 1e-09
 Identities = 37/93 (39%), Positives = 39/93 (41%)
 Frame = -2

Query: 415 RVAAVQPSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTR 236
           R +   P P   P  P  PPPPP PPPPP       +   PPSPPP              
Sbjct: 519 RPSPPSPPPPPSPPPPPSPPPPPSPPPPP-------SPPPPPSPPP-------------- 557

Query: 235 LSPPSPLPPEFC*ACGSRQGTPPRPSPPPPPLP 137
             PPSP PP            PP PSPPPPP P
Sbjct: 558 --PPSPPPP---------PSPPPPPSPPPPPSP 579

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 36/87 (41%), Positives = 37/87 (42%)
 Frame = -2

Query: 397 PSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPSP 218
           P P   P  P  PPPPP PPPPP       +   PPSPPP                PPSP
Sbjct: 531 PPPPPSPPPPPSPPPPPSPPPPP-------SPPPPPSPPP----------------PPSP 567

Query: 217 LPPEFC*ACGSRQGTPPRPSPPPPPLP 137
            PP            PP PSPPPPP P
Sbjct: 568 PPPP---------SPPPPPSPPPPPSP 585

 Score = 61.6 bits (148), Expect = 4e-09
 Identities = 36/87 (41%), Positives = 38/87 (43%)
 Frame = -2

Query: 397 PSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPSP 218
           PSP     +P  PPPPP PPPPP       +   PPSPPP                PPSP
Sbjct: 513 PSPRPPRPSPPSPPPPPSPPPPP-------SPPPPPSPPP----------------PPSP 549

Query: 217 LPPEFC*ACGSRQGTPPRPSPPPPPLP 137
            PP            PP PSPPPPP P
Sbjct: 550 PPP---------PSPPPPPSPPPPPSP 567

 Score = 58.5 bits (140), Expect = 4e-08
 Identities = 36/90 (40%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = -2

Query: 397 PSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPSP 218
           P P   P  P  PPPPP PPPPP       +   PPSPPP                PPSP
Sbjct: 543 PPPPPSPPPPPSPPPPPSPPPPP-------SPPPPPSPPP----------------PPSP 579

Query: 217 LPPEFC*ACGSR--QGTPPRPSPPPPPLPA 134
            PP       S   +  PPRP PP PP P+
Sbjct: 580 PPPPSPRHPPSPPPRPRPPRPQPPSPPSPS 609

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 34/84 (40%), Positives = 35/84 (41%)
 Frame = -2

Query: 397 PSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPSP 218
           P P   P  P  PPPPP PPPPP        R  PPSPPP             R  PP P
Sbjct: 555 PPPPPSPPPPPSPPPPPSPPPPPSPPPPPSPR-HPPSPPP-------------RPRPPRP 600

Query: 217 LPPEFC*ACGSRQGTPPRPSPPPP 146
            PP           +PP PSPP P
Sbjct: 601 QPP-----------SPPSPSPPSP 613

 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 35/88 (39%), Positives = 37/88 (41%), Gaps = 1/88 (1%)
 Frame = -2

Query: 397 PSPVQL-PRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPS 221
           PSP+   PR P+  PP P PP PP           PPSPPP                PPS
Sbjct: 503 PSPLLTSPRPPSPRPPRPSPPSPP----------PPPSPPP----------------PPS 536

Query: 220 PLPPEFC*ACGSRQGTPPRPSPPPPPLP 137
           P PP            PP PSPPPPP P
Sbjct: 537 PPPP---------PSPPPPPSPPPPPSP 555

 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 30/79 (37%), Positives = 31/79 (38%), Gaps = 7/79 (8%)
 Frame = -2

Query: 352 PPLPPPPPDC*VAC-------DARLSPPSPPPLQWQLDG*VSCDTRLSPPSPLPPEFC*A 194
           PP  PPPP   +           R SPPSPPP                PPSP PP     
Sbjct: 496 PPFVPPPPSPLLTSPRPPSPRPPRPSPPSPPP----------------PPSPPPP----- 534

Query: 193 CGSRQGTPPRPSPPPPPLP 137
                  PP PSPPPPP P
Sbjct: 535 ----PSPPPPPSPPPPPSP 549

 Score = 31.6 bits (70), Expect = 4.9
 Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 295 PPSPPPLQWQLDG*VSCDTRLSPPSPLPPEFC*ACGSRQGTPPRPSPP--PPPLPA 134
           PP P PL           T   PPSP PP         + +PP P PP  PPP P+
Sbjct: 500 PPPPSPLL----------TSPRPPSPRPP---------RPSPPSPPPPPSPPPPPS 536

>dbj|BAB62551.1| OSJNBa0089K24.8 [Oryza sativa (japonica cultivar-group)]
          Length = 1059

 Score = 63.5 bits (153), Expect = 1e-09
 Identities = 39/95 (41%), Positives = 44/95 (46%)
 Frame = -2

Query: 415 RVAAVQPSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTR 236
           + A+  PSP   P  PA  P PP PPPPP         LSPP+PPP              
Sbjct: 500 QAASRAPSPPAPPSPPA--PSPPAPPPPPPA-------LSPPAPPP----------PPPA 540

Query: 235 LSPPSPLPPEFC*ACGSRQGTPPRPSPPPPPLPAC 131
            SPP+PLPP           +PP P PPPPP P C
Sbjct: 541 PSPPAPLPP-------PPAPSPPAPPPPPPPPPPC 568

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 23/60 (38%), Positives = 29/60 (48%)
 Frame = -2

Query: 397 PSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPSP 218
           P+P+  P AP+ P PPP PPPPP C  A     S  +PPP   +       DT  +   P
Sbjct: 544 PAPLPPPPAPSPPAPPPPPPPPPPCPPAPPKTRSRQAPPPASTRATKKAKVDTTKNKEPP 603

>pir||G86292 hypothetical protein F7H2.17 [imported] - Arabidopsis thaliana
           gi|8927662|gb|AAF82153.1|AC034256_17 Contains similarity
           to extensin (atExt1) from Arabidopsis thaliana gb|U43627
           and is rich in proline and glycine.  EST gb|Z37262 comes
           from this gene
          Length = 1006

 Score = 63.5 bits (153), Expect = 1e-09
 Identities = 42/127 (33%), Positives = 48/127 (37%), Gaps = 37/127 (29%)
 Frame = -2

Query: 397 PSPVQLPRAPAGPPPPPL---------------------------PPPPPDC*VACDARL 299
           P P  LP  P  PPPPP+                           PPPPP   V C    
Sbjct: 349 PPPPSLPVTPCSPPPPPIIVNGAPPPPCVTCVQVSPPPPTPVPCSPPPPPPIPVPCPPPP 408

Query: 298 SPPSPPPLQWQLDG*VSCDTRLSPPSPLPPEFC*ACGSRQGTPP---------RPSPPPP 146
           SPP PPP Q        C T ++ P+P PP+ C  C     +PP          P PPPP
Sbjct: 409 SPPPPPPPQ-------PCITCVTAPAPPPPQPCITCVIAPASPPPQPCITCVAAPEPPPP 461

Query: 145 -PLPACI 128
            P   CI
Sbjct: 462 QPCITCI 468

 Score = 58.5 bits (140), Expect = 4e-08
 Identities = 42/126 (33%), Positives = 48/126 (37%), Gaps = 28/126 (22%)
 Frame = -2

Query: 406 AVQPSPVQLPRAPAGPPPPPLPP---------PPPDC*VAC---------DARLSPPSPP 281
           A  P P+ LP  P+ P  P  PP         PPP C V C             SPP PP
Sbjct: 340 ATLPPPLPLPPPPSLPVTPCSPPPPPIIVNGAPPPPC-VTCVQVSPPPPTPVPCSPPPPP 398

Query: 280 PLQWQLDG*VSCDTRLSPPSPLPPEFC*ACGSRQGTPP----------RPSPPPPPLPAC 131
           P+       V C    SPP P PP+ C  C +    PP            SPPP P   C
Sbjct: 399 PIP------VPCPPPPSPPPPPPPQPCITCVTAPAPPPPQPCITCVIAPASPPPQPCITC 452

Query: 130 IEESEP 113
           +   EP
Sbjct: 453 VAAPEP 458

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 33/92 (35%), Positives = 42/92 (44%), Gaps = 5/92 (5%)
 Frame = -2

Query: 397 PSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VS-----CDTRL 233
           P P  +P  P  PPP P PPPPP   + C    +PP P P    +    S     C T +
Sbjct: 395 PPPPPIP-VPCPPPPSPPPPPPPQPCITCVTAPAPPPPQPCITCVIAPASPPPQPCITCV 453

Query: 232 SPPSPLPPEFC*ACGSRQGTPPRPSPPPPPLP 137
           + P P PP+ C  C     +PP   P PP +P
Sbjct: 454 AAPEPPPPQPCITCIPAPASPP---PVPPVIP 482

 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 33/96 (34%), Positives = 40/96 (41%)
 Frame = -2

Query: 400 QPSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPS 221
           +PSP   P  P+ PP  P PPPPP   +       PPSPPP  +              PS
Sbjct: 130 RPSPCPPPLMPSPPPLVPSPPPPPPSPLVPSP--PPPSPPPFFFF-------------PS 174

Query: 220 PLPPEFC*ACGSRQGTPPRPSPPPPPLPACIEESEP 113
           P PP            PP    PPPPLP   + ++P
Sbjct: 175 PPPPVIV-------FPPPLVPSPPPPLPGGDQTTQP 203

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 33/95 (34%), Positives = 40/95 (41%), Gaps = 6/95 (6%)
 Frame = -2

Query: 403 VQPSPVQ--LPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLS 230
           + P P    LP     PPP PLPPPP          ++P SPPP    ++G        +
Sbjct: 327 IDPCPQNPFLPPPATLPPPLPLPPPP-------SLPVTPCSPPPPPIIVNG--------A 371

Query: 229 PPSPLPPEFC*ACGSRQGTPPRPS----PPPPPLP 137
           PP P     C  C      PP P     PPPPP+P
Sbjct: 372 PPPP-----CVTCVQVSPPPPTPVPCSPPPPPPIP 401

 Score = 44.3 bits (103), Expect = 7e-04
 Identities = 44/130 (33%), Positives = 52/130 (39%), Gaps = 4/130 (3%)
 Frame = -2

Query: 397 PSPVQ--LPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPP 224
           PSP    LP  P  PPP P P P P          SP  PPPL              SPP
Sbjct: 87  PSPENPFLPFQPPRPPPRPRPRPRP----------SPRLPPPLV------------PSPP 124

Query: 223 SPLPPEFC*ACGSRQGTPPR--PSPPPPPLPACIEESEP*LGSPANWFRNIDG*PALRLP 50
            PL P           +PP   PSPPPPP P+ +  S P    P  +F      P+   P
Sbjct: 125 PPLHPRPSPCPPPLMPSPPPLVPSPPPPP-PSPLVPSPPPPSPPPFFFF-----PSPPPP 178

Query: 49  LGCWVPQLLP 20
           +  + P L+P
Sbjct: 179 VIVFPPPLVP 188

 Score = 39.3 bits (90), Expect = 0.023
 Identities = 34/96 (35%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
 Frame = -2

Query: 397 PSPVQL-----PRAPAGPPP-----PPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VS 248
           P+P+ +     P  P  PPP     P LP PPP          S P PPPL   L     
Sbjct: 485 PTPIFILPPLPPLFPVLPPPSVTPSPVLPLPPP----------SAPLPPPLSSSLPS-PP 533

Query: 247 CDTRLSPPSPLPPEFC*ACGSRQGTPPRPSPPPPPL 140
               LSPP PLP       G     PP    PPP L
Sbjct: 534 LPLVLSPPPPLP-------GGTVSQPPFTMTPPPLL 562

 Score = 38.1 bits (87), Expect = 0.052
 Identities = 34/106 (32%), Positives = 41/106 (38%), Gaps = 2/106 (1%)
 Frame = -2

Query: 424 LKCRVAAVQPSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSC 245
           + C +A   P P       A P P    PPP  C     A  SPP  PP+   +   +  
Sbjct: 435 ITCVIAPASPPPQPCITCVAAPEP----PPPQPCITCIPAPASPPPVPPVIPFVPTPIFI 490

Query: 244 DTRLSPPSP-LPPEFC*ACGSRQGTPPRPSPPP-PPLPACIEESEP 113
              L P  P LPP       S   +P  P PPP  PLP  +  S P
Sbjct: 491 LPPLPPLFPVLPPP------SVTPSPVLPLPPPSAPLPPPLSSSLP 530

 Score = 35.8 bits (81), Expect = 0.26
 Identities = 38/103 (36%), Positives = 41/103 (38%), Gaps = 14/103 (13%)
 Frame = -2

Query: 406 AVQPSPVQLPRAPAGPPPPPLP---PPPPDC*VACDARLSPPSP--------PPLQW--- 269
           +V PSPV     P+ P PPPL    P PP         LSPP P        PP      
Sbjct: 505 SVTPSPVLPLPPPSAPLPPPLSSSLPSPP-----LPLVLSPPPPLPGGTVSQPPFTMTPP 559

Query: 268 QLDG*VSCDTRLSPPSPLPPEFC*ACGSRQGTPPRPSPPPPPL 140
            L G  +  T  SPP PL        GS  G P     PPPPL
Sbjct: 560 PLLGGGAPGTTDSPPPPL-------LGS--GAPGITGSPPPPL 593

 Score = 35.0 bits (79), Expect = 0.44
 Identities = 48/170 (28%), Positives = 57/170 (33%), Gaps = 38/170 (22%)
 Frame = -2

Query: 445  PRPWFGHLKCRVAAVQPSPVQL------------PRAPA---------GPPPPP--LPP- 338
            P  WF        +  PSPV L            P AP          G PPP   LPP 
Sbjct: 729  PLAWFSPPDITTGSPPPSPVFLLPPPLDRSTLTPPAAPVDNLPPVIITGSPPPVNNLPPD 788

Query: 337  ------PPPDC*VAC---DARLSPPS-----PPPLQWQLDG*VSCDTRLSPPSPLPPEFC 200
                  PPPD  +      + L+PP      PPP+Q               PS LPP   
Sbjct: 789  IVIGQPPPPDVTIEPPIDQSTLTPPVIPVTLPPPVQ-------------DLPSILPPP-- 833

Query: 199  *ACGSRQGTPPRPSPPPPPLPACIEESEP*LGSPANWFRNIDG*PALRLP 50
                     PP     PP LP  +++  P L  PA+ F      P L  P
Sbjct: 834  -----ADELPPPVQEFPPILPPPVQDFPPILAPPADEFPPNLPPPVLEFP 878

 Score = 32.0 bits (71), Expect = 3.7
 Identities = 31/103 (30%), Positives = 34/103 (32%), Gaps = 9/103 (8%)
 Frame = -2

Query: 397 PSPVQLPRAPAGPPP-----PPLPPPPPDC*VACDARLSPP----SPPPLQWQLDG*VSC 245
           PSP      P+ PPP     PPL P PP      D    PP     PPP           
Sbjct: 164 PSPPPFFFFPSPPPPVIVFPPPLVPSPPPPLPGGDQTTQPPPLWLPPPPF---------- 213

Query: 244 DTRLSPPSPLPPEFC*ACGSRQGTPPRPSPPPPPLPACIEESE 116
                P   LPP            PP    PPP +PA    +E
Sbjct: 214 GDETPPVFSLPPPL----DEFPPMPPITWLPPPDVPAQTSSAE 252

 Score = 30.8 bits (68), Expect = 8.3
 Identities = 38/127 (29%), Positives = 43/127 (32%), Gaps = 13/127 (10%)
 Frame = -2

Query: 454 GRCPRPWFGHLKCRVAAVQPSPVQLPRAPA--GPPPPPL-----------PPPPPDC*VA 314
           G  P P  G     +    P P+    AP   G PPPPL           PPPP     A
Sbjct: 619 GSPPPPLLGGGAPGITGSPPPPLLGGGAPGITGSPPPPLFGGGAPGITGSPPPPLFGGGA 678

Query: 313 CDARLSPPSPPPLQWQLDG*VSCDTRLSPPSPLPPEFC*ACGSRQGTPPRPSPPPPPLPA 134
                SPP P      L G  +    +SPP  L            G P     PPPPL A
Sbjct: 679 PGIAGSPPPP------LIGGGAPGITVSPPPLLGG----------GAPGITGSPPPPLVA 722

Query: 133 CIEESEP 113
            +    P
Sbjct: 723 DVPPMPP 729

>dbj|BAC57890.1| pherophorin [Volvox carteri f. nagariensis]
          Length = 606

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 38/92 (41%), Positives = 38/92 (41%)
 Frame = -2

Query: 412 VAAVQPSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRL 233
           V   QP P   P  P  PPPPP PPPPP          SPP PPP               
Sbjct: 200 VVEPQPPPPPPPPPPPSPPPPPPPPPPP----------SPPPPPPPP------------- 236

Query: 232 SPPSPLPPEFC*ACGSRQGTPPRPSPPPPPLP 137
            PPSP PP            PP PSPPPPP P
Sbjct: 237 PPPSPPPP---------PPPPPPPSPPPPPPP 259

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 35/88 (39%), Positives = 36/88 (40%)
 Frame = -2

Query: 397 PSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPSP 218
           P P   P  P  PPPPP PPPPP          SPP PPP                PPSP
Sbjct: 229 PPPPPPPPPPPSPPPPPPPPPPP----------SPPPPPP----------------PPSP 262

Query: 217 LPPEFC*ACGSRQGTPPRPSPPPPPLPA 134
            PP           +PP P PPP P PA
Sbjct: 263 SPPP-----PPPSPSPPPPPPPPSPPPA 285

 Score = 54.3 bits (129), Expect = 7e-07
 Identities = 35/91 (38%), Positives = 36/91 (39%)
 Frame = -2

Query: 409 AAVQPSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLS 230
           AA    P  +   P  PPPPP PPPP           SPP PPP                
Sbjct: 190 AACDCCPQNIVVEPQPPPPPPPPPPP-----------SPPPPPPPP-------------P 225

Query: 229 PPSPLPPEFC*ACGSRQGTPPRPSPPPPPLP 137
           PPSP PP            PP PSPPPPP P
Sbjct: 226 PPSPPPP---------PPPPPPPSPPPPPPP 247

 Score = 53.9 bits (128), Expect = 9e-07
 Identities = 35/90 (38%), Positives = 36/90 (39%), Gaps = 3/90 (3%)
 Frame = -2

Query: 397 PSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPSP 218
           P P   P  P  PPPPP PPPPP          SPP PPP                PPSP
Sbjct: 217 PPPPPPPPPPPSPPPPPPPPPPP----------SPPPPPPPP-------------PPPSP 253

Query: 217 LPPEFC*ACGSRQGTPPRPSP---PPPPLP 137
            PP           +PP P P   PPPP P
Sbjct: 254 PPPP-----PPPSPSPPPPPPSPSPPPPPP 278

 Score = 51.2 bits (121), Expect = 6e-06
 Identities = 33/87 (37%), Positives = 33/87 (37%)
 Frame = -2

Query: 397 PSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPSP 218
           PSP   P  P  P PPP PPPP             PSPPP                PPSP
Sbjct: 239 PSPPPPPPPPPPPSPPPPPPPP------------SPSPPP---------------PPPSP 271

Query: 217 LPPEFC*ACGSRQGTPPRPSPPPPPLP 137
            PP            PP PSPPP P P
Sbjct: 272 SPPP----------PPPPPSPPPAPPP 288

 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 33/88 (37%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
 Frame = -2

Query: 397 PSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPSP 218
           P P   P +P  PPPPP P PPP          SPP PPP               SPP P
Sbjct: 244 PPPPPPPPSPPPPPPPPSPSPPPP-----PPSPSPPPPPPPP-------------SPP-P 284

Query: 217 LPPEF------C*ACGSRQGTPPRPSPP 152
            PP F      C  C + + TPP  S P
Sbjct: 285 APPPFVPGFFDCELCFAAELTPPTDSAP 312

>dbj|BAC55695.1| putative diaphanous homologue [Oryza sativa (japonica
            cultivar-group)]
          Length = 1627

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 38/95 (40%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
 Frame = -2

Query: 397  PSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPSP 218
            P P+    AP  PPPPP PPPPP       AR  PP PPP             R  PP P
Sbjct: 1034 PPPITRSGAPPSPPPPPSPPPPPP---PPGARPGPPPPPP---------PPGARPGPPPP 1081

Query: 217  LPPEFC*ACGSRQGTPPRP-------SPPPPPLPA 134
             PP      G R   PP P       +PPPPP P+
Sbjct: 1082 PPPP-----GGRPSAPPLPPPGGRASAPPPPPPPS 1111

 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 45/117 (38%), Positives = 46/117 (38%), Gaps = 17/117 (14%)
 Frame = -2

Query: 397  PSPVQLP----RAPAGPPPPPL------PPPPPDC*VACDARLSPPSPPPLQWQLDG*VS 248
            P P  LP     AP  PPPPP       PPPPP       A  SPP PP           
Sbjct: 1002 PPPPPLPAARFNAPPPPPPPPTTHFNAPPPPPPPPITRSGAPPSPPPPP----------- 1050

Query: 247  CDTRLSPPSPLPPEFC*ACGSRQGTPP-------RPSPPPPPLPACIEESEP*LGSP 98
                 SPP P PP      G+R G PP       RP PPPPP P     S P L  P
Sbjct: 1051 -----SPPPPPPPP-----GARPGPPPPPPPPGARPGPPPPPPPPGGRPSAPPLPPP 1097

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 35/91 (38%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
 Frame = -2

Query: 397  PSPVQLPRAPAGPPPPPLP----PPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLS 230
            P P  L   P  PPPPP+     PPPP    A      PP PPP            T  +
Sbjct: 979  PPPPLLRSVPPPPPPPPISHSNAPPPPPLPAARFNAPPPPPPPPT-----------THFN 1027

Query: 229  PPSPLPPEFC*ACGSRQGTPPRPSPPPPPLP 137
             P P PP      G+    PP PSPPPPP P
Sbjct: 1028 APPPPPPPPITRSGAPPSPPPPPSPPPPPPP 1058

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 35/87 (40%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
 Frame = -2

Query: 370  PAGPPPPPL-PPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPSPLPPEFC*A 194
            P  PPPPPL PPPPP       +   PP PPPL           TR   P P PP     
Sbjct: 854  PPPPPPPPLPPPPPPPASSGLSSIPPPPPPPPLMS-----FGAQTRTFVPPPPPPPPPPR 908

Query: 193  CGSRQGTPPRPSPPPPPLPACIEESEP 113
             G    TP  P+PPPPPL + +    P
Sbjct: 909  SGVGGNTP--PAPPPPPLRSTVPAISP 933

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 35/94 (37%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
 Frame = -2

Query: 382  LPRAPAGPPPPPLPPPPPDC*VACDARLS-------------PPSPPPLQWQLDG*VSCD 242
            +P+  A PPPPP PPPP     A  + LS             PP PPPL        S  
Sbjct: 818  VPKIQAAPPPPPPPPPP----YASSSSLSMHMGSATKQQPPPPPPPPPLPPPPPPPASSG 873

Query: 241  -TRLSPPSPLPPEFC*ACGSRQGTPPRPSPPPPP 143
             + + PP P PP       +R   PP P PPPPP
Sbjct: 874  LSSIPPPPPPPPLMSFGAQTRTFVPPPPPPPPPP 907

 Score = 55.1 bits (131), Expect = 4e-07
 Identities = 39/111 (35%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
 Frame = -2

Query: 412  VAAVQPSPVQLPRAPAGP------PPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*V 251
            ++++ P P   P    G       PPPP PPPPP   V  +   +PP PPPL+       
Sbjct: 874  LSSIPPPPPPPPLMSFGAQTRTFVPPPPPPPPPPRSGVGGNTPPAPP-PPPLR------- 925

Query: 250  SCDTRLSPPSPLPPEFC*ACGSRQGTPPRPSPPPPPLPACIEESEP*LGSP 98
            S    +SPP P PP       S    PP P PPPPP P     S     +P
Sbjct: 926  STVPAISPPPPPPPPPL-KPSSGAPCPPPPPPPPPPPPPSAPSSRAFSSAP 975

 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 35/95 (36%), Positives = 39/95 (40%)
 Frame = -2

Query: 397  PSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPSP 218
            P P   PR+  G   PP PPPPP       A   PP PPP   +      C     PP P
Sbjct: 901  PPPPPPPRSGVGGNTPPAPPPPP-LRSTVPAISPPPPPPPPPLKPSSGAPCPPPPPPPPP 959

Query: 217  LPPEFC*ACGSRQGTPPRPSPPPPPLPACIEESEP 113
             PP    A  SR  +   P PPPPPL   +    P
Sbjct: 960  PPPPS--APSSRAFSSAPPPPPPPPLLRSVPPPPP 992

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 38/121 (31%), Positives = 43/121 (35%), Gaps = 23/121 (19%)
 Frame = -2

Query: 427  HLKCRVAAVQPSPVQLPRAPAGPPP---------PPLPPPPPDC*VACDARL----SPPS 287
            H+        P P   P  P  PPP         PP PPPPP        R      PP 
Sbjct: 844  HMGSATKQQPPPPPPPPPLPPPPPPPASSGLSSIPPPPPPPPLMSFGAQTRTFVPPPPPP 903

Query: 286  PPPLQWQLDG*V----------SCDTRLSPPSPLPPEFC*ACGSRQGTPPRPSPPPPPLP 137
            PPP +  + G            S    +SPP P PP            PP P PPPPP P
Sbjct: 904  PPPPRSGVGGNTPPAPPPPPLRSTVPAISPPPPPPPPPLKPSSGAPCPPPPPPPPPPPPP 963

Query: 136  A 134
            +
Sbjct: 964  S 964

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 35/95 (36%), Positives = 38/95 (39%), Gaps = 6/95 (6%)
 Frame = -2

Query: 400  QPSPVQLPRAPAGPPPPPLPPPPPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLSPPS 221
            +P P   P  P   P PP PPPPP          +PP PPP             R S P 
Sbjct: 1062 RPGPPPPPPPPGARPGPPPPPPPPG-----GRPSAPPLPPP-----------GGRASAPP 1105

Query: 220  PLPPEFC*ACGSRQGTPPRPSPP------PPPLPA 134
            P PP       +R G PP P PP      PPP PA
Sbjct: 1106 PPPPP-----STRLGAPPPPPPPGAGGRAPPPPPA 1135

 Score = 50.8 bits (120), Expect = 8e-06
 Identities = 37/107 (34%), Positives = 42/107 (38%), Gaps = 9/107 (8%)
 Frame = -2

Query: 406  AVQPSPVQLPRAPAGPPPPPLPPP-PPDC*VACDARLSPPSPPPLQWQLDG*VSCDTRLS 230
            A  P P++       PPPPP PPP  P     C     PP PPP         S     +
Sbjct: 918  APPPPPLRSTVPAISPPPPPPPPPLKPSSGAPCPPPPPPPPPPP---PPSAPSSRAFSSA 974

Query: 229  PPSPLPPEFC*ACGSRQGTPPRP--------SPPPPPLPACIEESEP 113
            PP P PP        R   PP P        +PPPPPLPA    + P
Sbjct: 975  PPPPPPPPLL-----RSVPPPPPPPPISHSNAPPPPPLPAARFNAPP 1016

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 35/98 (35%), Positives = 36/98 (36%), Gaps = 7/98 (7%)
 Frame = -2

Query: 415  RVAAVQPSPVQLPRAPAGPPPPP------LPPPPPDC*VACDARLSPPSPPPLQWQLDG* 254
            R +A  P P    R  A PPPPP       PPPPP    A   RL  P PPP        
Sbjct: 1100 RASAPPPPPPPSTRLGAPPPPPPPGAGGRAPPPPP----APGGRLGGPPPPP-------- 1147

Query: 253  VSCDTRLSPPSPLPPEFC*ACGSRQGTPPR-PSPPPPP 143
                    PP           G R   PPR P  PPPP
Sbjct: 1148 --------PP-----------GGRAPPPPRGPGAPPPP 1166



EST assemble image


clone accession position
1 MX043a02_r BP087755 1 365
2 CM043g09_r AV389474 174 470




Chlamydomonas reinhardtii
Kazusa DNA Research Institute