Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001384A_C01 KCC001384A_c01
(602 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_334701.1| hypothetical protein [Mycobacterium tuberculosi... 47 3e-04
ref|XP_327724.1| hypothetical protein [Neurospora crassa] gi|289... 45 0.001
dbj|BAC86815.1| unnamed protein product [Homo sapiens] 43 0.003
ref|XP_292403.3| similar to formin [Homo sapiens] 43 0.003
gb|AAD27577.1|AF114171_19 hypothetical protein [Sorghum bicolor] 43 0.004
>ref|NP_334701.1| hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|13879785|gb|AAK44515.1| hypothetical protein
[Mycobacterium tuberculosis CDC1551]
Length = 598
Score = 46.6 bits (109), Expect = 3e-04
Identities = 33/94 (35%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Frame = +1
Query: 343 ARPSASTIDVWQTGKNAKPSSSCSPADPTRSYSSKPPLPPALPGVP-------PLPPPFQ 501
++PS T N PS PA P S PPLPPA P P P PPF
Sbjct: 329 SKPSPPTPPAPPEPNNVPPSPPIPPAPPPPS-GLDPPLPPAPPAAPRLSMPASPPAPPFP 387
Query: 502 QHLLLLL--LQPLLLQRNARPEPQPPALRKPRAP 597
L++L+ L P+ N+ PEP P P+ P
Sbjct: 388 PTLIMLVPPLPPVPPAPNSPPEPPSPPAPPPKMP 421
Score = 34.7 bits (78), Expect = 1.1
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +1
Query: 391 AKPSSSCSPADPTRSYSSKPPLPPALPGVP-PLPPPFQQHLLLLLLQPLLLQRNARPEPQ 567
A S C PA P+ PP+PPA P P PPF + PL A P
Sbjct: 14 APNSPPCPPAPPSAPSVPAPPVPPAPKSNPFPPVPPFAPNPPAPPAPPL-----ANSPPV 68
Query: 568 PPALRKPRAP 597
PPA P AP
Sbjct: 69 PPAPAVPPAP 78
Score = 34.3 bits (77), Expect = 1.4
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +1
Query: 388 NAKPSSSCSPADPTRSYSSKPPLPPALPGVPPLP-----PPFQQHLLLLLLQPLLLQRNA 552
N SSC P P + + P+PP LP +PPLP PP L L A
Sbjct: 234 NPSRPSSCPPKPPAPAVPAGAPVPP-LPPLPPLPISTPLPPAPPLPPLPALPTSPGAPPA 292
Query: 553 RPEPQPPALRKPRAP 597
P P PA P AP
Sbjct: 293 PPVPPAPAKDPPPAP 307
Score = 33.9 bits (76), Expect = 1.8
Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Frame = +1
Query: 397 PSSSCSPADPTRSYSSKPPLPPALPGVPPLP--------PPFQQHLLLLLLQPLLLQRNA 552
P+S PA PT ++ PP PPA P P P PP + P A
Sbjct: 447 PASVAPPAPPTPPSANSPPFPPAPPAPPVAPKAAANPPGPPTPAAPNSMPAAP-----PA 501
Query: 553 RPEPQPPALRKPRAP 597
P P P L P AP
Sbjct: 502 PPAPPVPVLALPPAP 516
Score = 31.6 bits (70), Expect = 9.0
Identities = 24/74 (32%), Positives = 32/74 (42%), Gaps = 4/74 (5%)
Frame = +1
Query: 388 NAKPSSSCSPADPTRSYSSKPPLPPA--LPGVPPLPPPFQQHLLLLLLQPLLLQRNARPE 561
N+ P++ +P P + PP PPA LP PP PP L P A P+
Sbjct: 493 NSMPAAPPAPPAPPVPVLALPPAPPAPPLPMSPPAPP----------LPPAPPLTPAAPD 542
Query: 562 PQPPAL--RKPRAP 597
P P L +P +P
Sbjct: 543 PPAPPLPINQPPSP 556
>ref|XP_327724.1| hypothetical protein [Neurospora crassa] gi|28926414|gb|EAA35389.1|
hypothetical protein [Neurospora crassa]
Length = 636
Score = 44.7 bits (104), Expect = 0.001
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Frame = +1
Query: 379 TGKNAKPS-----SSCSPADPTRSYSSKPPLPPALPG-VPPLPPPFQQHLLLLLLQ---- 528
TG+ + P SS P P R+ +++PPLPP PG PPLPP + +L +
Sbjct: 378 TGQRSVPPPPPSRSSVPPPPPPRNSAAQPPLPPKAPGPAPPLPPASSRPPPMLPTRSPAP 437
Query: 529 ---PLLLQRNARPEPQPPALRKPRAP 597
P L NA P P PA + P P
Sbjct: 438 PQAPPLPTSNAPPPPPLPATQAPPPP 463
Score = 38.9 bits (89), Expect = 0.057
Identities = 38/115 (33%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Frame = +1
Query: 295 LPPAFTSN*GAKARLRARPSASTIDVWQTGKNAK-----PSSSCSPADPTRSYSSKPP-- 453
+PP FT G ++ PS S++ +N+ P + PA P SS+PP
Sbjct: 373 VPPPFT---GQRSVPPPPPSRSSVPPPPPPRNSAAQPPLPPKAPGPAPPLPPASSRPPPM 429
Query: 454 LP---PALPGVPPLP----PPFQQHLLLLLLQPLLLQRNARPEPQPPALRKPRAP 597
LP PA P PPLP PP P L + P P PPA P AP
Sbjct: 430 LPTRSPAPPQAPPLPTSNAPPPPPLPATQAPPPPPLPATSAPPPPPPAPPAPPAP 484
Score = 35.4 bits (80), Expect = 0.63
Identities = 24/65 (36%), Positives = 27/65 (40%), Gaps = 1/65 (1%)
Frame = +1
Query: 397 PSSSCSPADPTRSYSSKPPLPPALPGVPPLPPPFQQHLLLLLLQPLLLQRNARPEPQ-PP 573
PS S P S PP PP+ VPP PPP QP L + P P PP
Sbjct: 367 PSQRFSVPPPFTGQRSVPPPPPSRSSVPPPPPPRNS-----AAQPPLPPKAPGPAPPLPP 421
Query: 574 ALRKP 588
A +P
Sbjct: 422 ASSRP 426
Score = 33.9 bits (76), Expect = 1.8
Identities = 21/66 (31%), Positives = 26/66 (38%)
Frame = +1
Query: 385 KNAKPSSSCSPADPTRSYSSKPPLPPALPGVPPLPPPFQQHLLLLLLQPLLLQRNARPEP 564
+ AK S P S PP PA+ PP PP + + P +R P P
Sbjct: 241 EQAKQGIHTSTPPPPPPPPSAPPNGPAMRAPPPPPPAAAPRSVSESITPSTSRRGPVPPP 300
Query: 565 QPPALR 582
PPA R
Sbjct: 301 PPPARR 306
Score = 32.7 bits (73), Expect = 4.1
Identities = 30/116 (25%), Positives = 41/116 (34%), Gaps = 3/116 (2%)
Frame = +1
Query: 235 PTATVSTPAA*PRLS*PWNHLPPAFTSN*GA-KARLRARPSASTIDVWQTGKNAKPSSSC 411
P + + P P+ P LPPA + R A P A + ++
Sbjct: 399 PRNSAAQPPLPPKAPGPAPPLPPASSRPPPMLPTRSPAPPQAPPLPTSNAPPPPPLPATQ 458
Query: 412 SPADPTRSYSSKPPLPPALPGVPPLPPPFQQHL--LLLLLQPLLLQRNARPEPQPP 573
+P P +S PP PP P PP PP H + P+ P P PP
Sbjct: 459 APPPPPLPATSAPPPPPPAPPAPPAPPLPAAHAPPPPPPMPPMPAPSGGAPPPPPP 514
>dbj|BAC86815.1| unnamed protein product [Homo sapiens]
Length = 844
Score = 43.1 bits (100), Expect = 0.003
Identities = 25/64 (39%), Positives = 28/64 (43%)
Frame = +1
Query: 406 SCSPADPTRSYSSKPPLPPALPGVPPLPPPFQQHLLLLLLQPLLLQRNARPEPQPPALRK 585
S SPA P S+ PPLPP P PPLPPP +A P P PP
Sbjct: 312 SLSPAPPMPPVSAGPPLPPPPPPPPPLPPP----------------SSAGPPPPPPPPPL 355
Query: 586 PRAP 597
P +P
Sbjct: 356 PNSP 359
>ref|XP_292403.3| similar to formin [Homo sapiens]
Length = 542
Score = 43.1 bits (100), Expect = 0.003
Identities = 25/64 (39%), Positives = 28/64 (43%)
Frame = +1
Query: 406 SCSPADPTRSYSSKPPLPPALPGVPPLPPPFQQHLLLLLLQPLLLQRNARPEPQPPALRK 585
S SPA P S+ PPLPP P PPLPPP +A P P PP
Sbjct: 155 SLSPAPPMPPVSAGPPLPPPPPPPPPLPPP----------------SSAGPPPPPPPPPL 198
Query: 586 PRAP 597
P +P
Sbjct: 199 PNSP 202
>gb|AAD27577.1|AF114171_19 hypothetical protein [Sorghum bicolor]
Length = 1475
Score = 42.7 bits (99), Expect = 0.004
Identities = 23/67 (34%), Positives = 32/67 (47%)
Frame = -1
Query: 596 GALGFRRAGGCGSGLALRWSRSGCRSRSSKCC*KGGGSGGTPGSAGGNGGLELYERVGSA 417
G G GGCGSG+A+ S++ ++S C G G GG G GG G + + S
Sbjct: 849 GGCGSGCGGGCGSGMAIEGSKTANHAKSGGC---GSGCGGGCGGGGGCGTMLKASTMASV 905
Query: 416 GEQDDDG 396
G+ G
Sbjct: 906 GQSKSGG 912
Score = 34.7 bits (78), Expect = 1.1
Identities = 21/67 (31%), Positives = 27/67 (39%)
Frame = -1
Query: 596 GALGFRRAGGCGSGLALRWSRSGCRSRSSKCC*KGGGSGGTPGSAGGNGGLELYERVGSA 417
G G GGCG G+A+ S++ ++S C GSG G GG G L
Sbjct: 915 GGCGSGCGGGCGGGMAIEGSKTANHAKSGGC-----GSGCGSGCGGGCGTLFSSSTAADQ 969
Query: 416 GEQDDDG 396
G G
Sbjct: 970 GHSRSSG 976
Score = 33.5 bits (75), Expect = 2.4
Identities = 21/59 (35%), Positives = 26/59 (43%)
Frame = -1
Query: 572 GGCGSGLALRWSRSGCRSRSSKCC*KGGGSGGTPGSAGGNGGLELYERVGSAGEQDDDG 396
GGCG+ L S +SRS C G G GG G GG G + + S G+ G
Sbjct: 791 GGCGTMLKASTMASEGQSRSGGC---GSGCGGGCGGGGGCGTMLKASTMASEGQSKSGG 846
Score = 31.6 bits (70), Expect = 9.0
Identities = 19/60 (31%), Positives = 27/60 (44%), Gaps = 1/60 (1%)
Frame = -1
Query: 572 GGCGSGLALRWSRSGCRSRSSKCC*KGGGSGGTPGSAGGNGGL-ELYERVGSAGEQDDDG 396
GGCGSG + +G ++S C G GG G GG G + + + G G+ G
Sbjct: 985 GGCGSGSMVAEGSTGRHAKSGGC---GSSCGGGCGGGGGCGTIFNVSTKAGGEGKHSVSG 1041
