KCC001372A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC001372A_C01 KCC001372A_c01
agcaacctatgtatgCGTGCCATTGCATGCGCGCTGCAAGACCTCGGTCTACGTGCCCTG
TTTGAGGCGCGTCGGGGTATGGACCGCAATTACTTTCTCGCATACACAATGACGTCATGT
GGATAGAAATGCATTTCCCTTTCTTTATGGCGCCGGAGCTCACCACCTTGCGCTACCGGT
GTCGCCTGTCCTGCCTTCCTGCGTTCATGGCACCGCCAGCCGCGTCGCACTCAGTGGAAG
GCACAAGGCACTTGCACCGTGCTGCTATGTTGGTGCTGCCGCATGGTAGGCACGCGCTTG
CGCACAGGGGCAGGTGGTGAAGGGTCGCTGAGCGCCGGACCACCGCCAGCTTACGGGGCG
GAATGTTCCCGCTGCTGCTGTATATAACCATTGGCGCTTTGCAAACGGTTGACAGTTATA
ATAAGAAGGCGATGCCCTTAGCTGGCGGAATGGAGGGCACCCAAAGCCCGGGGCTGGATG
ACACCAAAGCCCCACGGTCCTGGGTCTGACCCGGGTTAGGTGGGACCTGCATTCCGTATC
ATGACGGTTGCAGCTGGGGTCCGGCAGCGGGGTGTTAGATGGGTGGGATGGGCCGGCCGT
TGAGTCGGTTACGGCGTAATTGTGTGAAGCGCTAGTCATTGCCCTTACGTGTGACGTGCA
TGCGATGCATGTGCATGTGCCTTGCGTCCCAGCTGGGCCCAACCCGGTGGCTGGCTGGGC
GCTGGATGCATGTGGCGCAGCGAGGAATGAAGGCCTAGTGCCGACAAGAGCCTGAACGCA
ACACTCGACATTGGTGTTTGTTGGTCAACATGGCTGTGGGATACCTCGCGTATGCAGGTG
CATGCTCAAAGTTGACGATGGTTAGCCTGGGCAGCCAGGGGTCACGCTGTGTTGGCGCAG
TTGTGCATATGACACCGCGCATGCGGCAGGGTTTGTGGGGTTATCGGATCTGGCACACGT
GACAGTAATTGATGGTGACGTGATGGCCGTCTGTTCCGATCATTAATATCCCAAAAGACG
TCGTAGTCACTAGTCGGTGGGGGCTGCGTAGCATCTGCTCCGGCGCGCGCTCGTGCTGTG
GCGCGAGGGAGCTTGCGCATAAGCGGAATACACCAAACCAATACATCGTTTGT
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001372A_C01 KCC001372A_c01
(1133 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO38851.1| sublingual apomucin [Mus musculus] 40 0.098
gb|AAO49800.1| MUC19 [Mus musculus] 40 0.098
ref|XP_318717.1| ENSANGP00000004655 [Anopheles gambiae] gi|30174... 39 0.22
dbj|BAC85906.1| unnamed protein product [Homo sapiens] 38 0.28
ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophil... 38 0.37
>gb|AAO38851.1| sublingual apomucin [Mus musculus]
Length = 814
Score = 39.7 bits (91), Expect = 0.098
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -3
Query: 741 AAPHASSAQPATGLGPAGTQGTCTCIACTSHVRAMTSASHNYAVTDSTAGPSHPSNTPLP 562
+AP ++S QP G +GT + + A + T+AS+ + STAGP+ + T P
Sbjct: 235 SAPASTSGQPGASTGSSGTSSSVSSTAAATTAGTTTAASNETSAPASTAGPTSSATTAAP 294
Query: 561 DPS 553
S
Sbjct: 295 ASS 297
Score = 39.7 bits (91), Expect = 0.098
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -3
Query: 741 AAPHASSAQPATGLGPAGTQGTCTCIACTSHVRAMTSASHNYAVTDSTAGPSHPSNTPLP 562
+AP ++S QP G +GT + + A + T+AS+ + STAGP+ + T P
Sbjct: 72 SAPASTSGQPGASTGSSGTSSSVSSTAAATTAGTTTAASNETSAPASTAGPTSSATTAAP 131
Query: 561 DPS 553
S
Sbjct: 132 ASS 134
Score = 39.3 bits (90), Expect = 0.13
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -3
Query: 741 AAPHASSAQPATGLGPAGTQGTCTCIACTSHVRAMTSASHNYAVTDSTAGPSHPSNTPLP 562
+AP ++S QP G +GT + + A + T+AS+ + STAGP+ + T P
Sbjct: 398 SAPVSTSGQPGASTGSSGTSSSVSSTAAATTAGTTTAASNETSAPASTAGPTSSATTAAP 457
Query: 561 DPS 553
S
Sbjct: 458 ASS 460
>gb|AAO49800.1| MUC19 [Mus musculus]
Length = 610
Score = 39.7 bits (91), Expect = 0.098
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -3
Query: 741 AAPHASSAQPATGLGPAGTQGTCTCIACTSHVRAMTSASHNYAVTDSTAGPSHPSNTPLP 562
+AP ++S QP G +GT + + A + T+AS+ + STAGP+ + T P
Sbjct: 194 SAPASTSGQPGASTGSSGTSSSVSSTAAATTAGTTTAASNETSAPASTAGPTSSATTAAP 253
Query: 561 DPS 553
S
Sbjct: 254 ASS 256
Score = 39.7 bits (91), Expect = 0.098
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -3
Query: 741 AAPHASSAQPATGLGPAGTQGTCTCIACTSHVRAMTSASHNYAVTDSTAGPSHPSNTPLP 562
+AP ++S QP G +GT + + A + T+AS+ + STAGP+ + T P
Sbjct: 31 SAPASTSGQPGASTGSSGTSSSVSSTAAATTAGTTTAASNETSAPASTAGPTSSATTAAP 90
Query: 561 DPS 553
S
Sbjct: 91 ASS 93
>ref|XP_318717.1| ENSANGP00000004655 [Anopheles gambiae] gi|30174516|gb|EAA13969.2|
ENSANGP00000004655 [Anopheles gambiae str. PEST]
Length = 3150
Score = 38.5 bits (88), Expect = 0.22
Identities = 54/213 (25%), Positives = 76/213 (35%), Gaps = 10/213 (4%)
Frame = -3
Query: 1107 SAYAQAPSRHSTSARRSRCYAAPTD**LRRLLGY**SEQTAITSPSITVTCARSDNPTNP 928
SA PS + R + PTD + S +A T+P T T T
Sbjct: 2149 SASTPEPSTTPGTTRTTPTRPTPTDSTMSS------SMSSASTTPGTTRTTPTRPTSTES 2202
Query: 927 AACAVSYAQLRQHSVTPGC-------PG*PSSTLSMHLHTRGIPQPC*PTNTNVECCVQA 769
+S A + S TPG P ST+S + + P+P T
Sbjct: 2203 TDTTMSSASTPEPSTTPGTTRTTPTRPTPTDSTMSSSMSSASTPEPSTTPGTT------R 2256
Query: 768 LVGTRPSFLAAPHASSAQPATGLGPAGTQGT--CTCIACTSHVRAMTSASHNYAVTDSTA 595
TRP+ +SS A+ P+ T GT T T M+S+ + + +S+
Sbjct: 2257 TTPTRPTPTDTTMSSSMSSASTPEPSTTPGTTRTTPTRPTPTDSTMSSSMSSASTPESST 2316
Query: 594 GPS-HPSNTPLPDPSCNRHDTECRSHLTRVRPR 499
P + LP P C CR L R PR
Sbjct: 2317 TPELLQQDQHLPIPQCR---LVCRQPLLRSHPR 2346
>dbj|BAC85906.1| unnamed protein product [Homo sapiens]
Length = 175
Score = 38.1 bits (87), Expect = 0.28
Identities = 36/129 (27%), Positives = 45/129 (33%), Gaps = 9/129 (6%)
Frame = -1
Query: 947 PITPQTLPHARCHMHNCANTA*PL---------AAQANHRQL*ACTCIREVSHSHVDQQT 795
P T HA+ MH C +T A+ R A TC R H+H
Sbjct: 30 PARTCTHTHAQALMHRCTHTQGMYLHTRVNTRTGTHADARIHSASTCTRVHIHAHAGTHA 89
Query: 794 PMSSVAFRLLSALGLHSSLRHMHPAPSQPPGWAQLGRKAHAHASHARHT*GQ*LALHTIT 615
M + L + + H+ H H P L +AH HA T Q LHT T
Sbjct: 90 QMHTQCTYLHTRVHTHT---HRHSCPDANIHCTYLHTRAHTHAQALMQTYAQCTYLHTRT 146
Query: 614 P*PTQRPAH 588
TQ H
Sbjct: 147 HTHTQALMH 155
>ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophila melanogaster]
gi|28380257|gb|AAF50957.3| CG3047-PA [Drosophila
melanogaster]
Length = 1225
Score = 37.7 bits (86), Expect = 0.37
Identities = 49/195 (25%), Positives = 70/195 (35%), Gaps = 6/195 (3%)
Frame = -3
Query: 981 TSPSITVTCARSDNPTNPAACAVSYAQLRQHSVTPGCPG*PSSTLSMHLHTRGIPQP--- 811
T+P T T S T + + R + TP ++T S T P+
Sbjct: 961 TTPRSTTTTTTSRPTTTTPRSTTTPSTSRPTTTTPRS----TTTTSTSRPTTTTPRSTTK 1016
Query: 810 ---C*PTNTNVECCVQALVGTRPSFLAAPHASSAQPATGLGPAGTQGTCTCIACTSHVRA 640
C PT T +RP+ P +++ T P T T CTS
Sbjct: 1017 TSTCAPTTTTPRSTTTTTT-SRPT-TTTPRSTTT--TTTSRPTTTTPRSTTTPCTSRPTT 1072
Query: 639 MTSASHNYAVTDSTAGPSHPSNTPLPDPSCNRHDTECRSHLTRVRPRTVGLWCHPAPGFG 460
T S T S + P +T P P+ + R+ TR RP CHP P +
Sbjct: 1073 TTPRSTT-TTTTSRPTTTTPRSTTTPCPTTTPSASPTRTTTTR-RPCP----CHPQPPYQ 1126
Query: 459 CPPFRQLRASPSYYN 415
PP+ +P+Y N
Sbjct: 1127 IPPWSWWYPNPTYPN 1141
EST assemble image
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|
clone |
accession |
position |
1 |
MX006h12_r |
BP086340 |
1 |
395 |
2 |
LC029b09_r |
AV620955 |
16 |
521 |
3 |
LC014f10_r |
AV619897 |
66 |
698 |
4 |
CM042b05_r |
AV389270 |
121 |
340 |
5 |
CM047f05_r |
AV388579 |
196 |
469 |
6 |
HC015g12_r |
AV633029 |
445 |
858 |
7 |
CM044g11_r |
AV389530 |
585 |
1133 |
8 |
LC025a01_r |
AV620648 |
630 |
1130 |
9 |
MX202c02_r |
BP089175 |
677 |
1021 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute