KCC001372A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001372A_C01 KCC001372A_c01
agcaacctatgtatgCGTGCCATTGCATGCGCGCTGCAAGACCTCGGTCTACGTGCCCTG
TTTGAGGCGCGTCGGGGTATGGACCGCAATTACTTTCTCGCATACACAATGACGTCATGT
GGATAGAAATGCATTTCCCTTTCTTTATGGCGCCGGAGCTCACCACCTTGCGCTACCGGT
GTCGCCTGTCCTGCCTTCCTGCGTTCATGGCACCGCCAGCCGCGTCGCACTCAGTGGAAG
GCACAAGGCACTTGCACCGTGCTGCTATGTTGGTGCTGCCGCATGGTAGGCACGCGCTTG
CGCACAGGGGCAGGTGGTGAAGGGTCGCTGAGCGCCGGACCACCGCCAGCTTACGGGGCG
GAATGTTCCCGCTGCTGCTGTATATAACCATTGGCGCTTTGCAAACGGTTGACAGTTATA
ATAAGAAGGCGATGCCCTTAGCTGGCGGAATGGAGGGCACCCAAAGCCCGGGGCTGGATG
ACACCAAAGCCCCACGGTCCTGGGTCTGACCCGGGTTAGGTGGGACCTGCATTCCGTATC
ATGACGGTTGCAGCTGGGGTCCGGCAGCGGGGTGTTAGATGGGTGGGATGGGCCGGCCGT
TGAGTCGGTTACGGCGTAATTGTGTGAAGCGCTAGTCATTGCCCTTACGTGTGACGTGCA
TGCGATGCATGTGCATGTGCCTTGCGTCCCAGCTGGGCCCAACCCGGTGGCTGGCTGGGC
GCTGGATGCATGTGGCGCAGCGAGGAATGAAGGCCTAGTGCCGACAAGAGCCTGAACGCA
ACACTCGACATTGGTGTTTGTTGGTCAACATGGCTGTGGGATACCTCGCGTATGCAGGTG
CATGCTCAAAGTTGACGATGGTTAGCCTGGGCAGCCAGGGGTCACGCTGTGTTGGCGCAG
TTGTGCATATGACACCGCGCATGCGGCAGGGTTTGTGGGGTTATCGGATCTGGCACACGT
GACAGTAATTGATGGTGACGTGATGGCCGTCTGTTCCGATCATTAATATCCCAAAAGACG
TCGTAGTCACTAGTCGGTGGGGGCTGCGTAGCATCTGCTCCGGCGCGCGCTCGTGCTGTG
GCGCGAGGGAGCTTGCGCATAAGCGGAATACACCAAACCAATACATCGTTTGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001372A_C01 KCC001372A_c01
         (1133 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO38851.1| sublingual apomucin [Mus musculus]                      40  0.098
gb|AAO49800.1| MUC19 [Mus musculus]                                    40  0.098
ref|XP_318717.1| ENSANGP00000004655 [Anopheles gambiae] gi|30174...    39  0.22
dbj|BAC85906.1| unnamed protein product [Homo sapiens]                 38  0.28
ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophil...    38  0.37

>gb|AAO38851.1| sublingual apomucin [Mus musculus]
          Length = 814

 Score = 39.7 bits (91), Expect = 0.098
 Identities = 20/63 (31%), Positives = 32/63 (50%)
 Frame = -3

Query: 741 AAPHASSAQPATGLGPAGTQGTCTCIACTSHVRAMTSASHNYAVTDSTAGPSHPSNTPLP 562
           +AP ++S QP    G +GT  + +  A  +     T+AS+  +   STAGP+  + T  P
Sbjct: 235 SAPASTSGQPGASTGSSGTSSSVSSTAAATTAGTTTAASNETSAPASTAGPTSSATTAAP 294

Query: 561 DPS 553
             S
Sbjct: 295 ASS 297

 Score = 39.7 bits (91), Expect = 0.098
 Identities = 20/63 (31%), Positives = 32/63 (50%)
 Frame = -3

Query: 741 AAPHASSAQPATGLGPAGTQGTCTCIACTSHVRAMTSASHNYAVTDSTAGPSHPSNTPLP 562
           +AP ++S QP    G +GT  + +  A  +     T+AS+  +   STAGP+  + T  P
Sbjct: 72  SAPASTSGQPGASTGSSGTSSSVSSTAAATTAGTTTAASNETSAPASTAGPTSSATTAAP 131

Query: 561 DPS 553
             S
Sbjct: 132 ASS 134

 Score = 39.3 bits (90), Expect = 0.13
 Identities = 20/63 (31%), Positives = 32/63 (50%)
 Frame = -3

Query: 741 AAPHASSAQPATGLGPAGTQGTCTCIACTSHVRAMTSASHNYAVTDSTAGPSHPSNTPLP 562
           +AP ++S QP    G +GT  + +  A  +     T+AS+  +   STAGP+  + T  P
Sbjct: 398 SAPVSTSGQPGASTGSSGTSSSVSSTAAATTAGTTTAASNETSAPASTAGPTSSATTAAP 457

Query: 561 DPS 553
             S
Sbjct: 458 ASS 460

>gb|AAO49800.1| MUC19 [Mus musculus]
          Length = 610

 Score = 39.7 bits (91), Expect = 0.098
 Identities = 20/63 (31%), Positives = 32/63 (50%)
 Frame = -3

Query: 741 AAPHASSAQPATGLGPAGTQGTCTCIACTSHVRAMTSASHNYAVTDSTAGPSHPSNTPLP 562
           +AP ++S QP    G +GT  + +  A  +     T+AS+  +   STAGP+  + T  P
Sbjct: 194 SAPASTSGQPGASTGSSGTSSSVSSTAAATTAGTTTAASNETSAPASTAGPTSSATTAAP 253

Query: 561 DPS 553
             S
Sbjct: 254 ASS 256

 Score = 39.7 bits (91), Expect = 0.098
 Identities = 20/63 (31%), Positives = 32/63 (50%)
 Frame = -3

Query: 741 AAPHASSAQPATGLGPAGTQGTCTCIACTSHVRAMTSASHNYAVTDSTAGPSHPSNTPLP 562
           +AP ++S QP    G +GT  + +  A  +     T+AS+  +   STAGP+  + T  P
Sbjct: 31  SAPASTSGQPGASTGSSGTSSSVSSTAAATTAGTTTAASNETSAPASTAGPTSSATTAAP 90

Query: 561 DPS 553
             S
Sbjct: 91  ASS 93

>ref|XP_318717.1| ENSANGP00000004655 [Anopheles gambiae] gi|30174516|gb|EAA13969.2|
            ENSANGP00000004655 [Anopheles gambiae str. PEST]
          Length = 3150

 Score = 38.5 bits (88), Expect = 0.22
 Identities = 54/213 (25%), Positives = 76/213 (35%), Gaps = 10/213 (4%)
 Frame = -3

Query: 1107 SAYAQAPSRHSTSARRSRCYAAPTD**LRRLLGY**SEQTAITSPSITVTCARSDNPTNP 928
            SA    PS    + R +     PTD  +        S  +A T+P  T T       T  
Sbjct: 2149 SASTPEPSTTPGTTRTTPTRPTPTDSTMSS------SMSSASTTPGTTRTTPTRPTSTES 2202

Query: 927  AACAVSYAQLRQHSVTPGC-------PG*PSSTLSMHLHTRGIPQPC*PTNTNVECCVQA 769
                +S A   + S TPG        P    ST+S  + +   P+P     T        
Sbjct: 2203 TDTTMSSASTPEPSTTPGTTRTTPTRPTPTDSTMSSSMSSASTPEPSTTPGTT------R 2256

Query: 768  LVGTRPSFLAAPHASSAQPATGLGPAGTQGT--CTCIACTSHVRAMTSASHNYAVTDSTA 595
               TRP+      +SS   A+   P+ T GT   T    T     M+S+  + +  +S+ 
Sbjct: 2257 TTPTRPTPTDTTMSSSMSSASTPEPSTTPGTTRTTPTRPTPTDSTMSSSMSSASTPESST 2316

Query: 594  GPS-HPSNTPLPDPSCNRHDTECRSHLTRVRPR 499
             P     +  LP P C      CR  L R  PR
Sbjct: 2317 TPELLQQDQHLPIPQCR---LVCRQPLLRSHPR 2346

>dbj|BAC85906.1| unnamed protein product [Homo sapiens]
          Length = 175

 Score = 38.1 bits (87), Expect = 0.28
 Identities = 36/129 (27%), Positives = 45/129 (33%), Gaps = 9/129 (6%)
 Frame = -1

Query: 947 PITPQTLPHARCHMHNCANTA*PL---------AAQANHRQL*ACTCIREVSHSHVDQQT 795
           P    T  HA+  MH C +T                A+ R   A TC R   H+H     
Sbjct: 30  PARTCTHTHAQALMHRCTHTQGMYLHTRVNTRTGTHADARIHSASTCTRVHIHAHAGTHA 89

Query: 794 PMSSVAFRLLSALGLHSSLRHMHPAPSQPPGWAQLGRKAHAHASHARHT*GQ*LALHTIT 615
            M +    L + +  H+   H H  P        L  +AH HA     T  Q   LHT T
Sbjct: 90  QMHTQCTYLHTRVHTHT---HRHSCPDANIHCTYLHTRAHTHAQALMQTYAQCTYLHTRT 146

Query: 614 P*PTQRPAH 588
              TQ   H
Sbjct: 147 HTHTQALMH 155

>ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophila melanogaster]
            gi|28380257|gb|AAF50957.3| CG3047-PA [Drosophila
            melanogaster]
          Length = 1225

 Score = 37.7 bits (86), Expect = 0.37
 Identities = 49/195 (25%), Positives = 70/195 (35%), Gaps = 6/195 (3%)
 Frame = -3

Query: 981  TSPSITVTCARSDNPTNPAACAVSYAQLRQHSVTPGCPG*PSSTLSMHLHTRGIPQP--- 811
            T+P  T T   S   T       + +  R  + TP      ++T S    T   P+    
Sbjct: 961  TTPRSTTTTTTSRPTTTTPRSTTTPSTSRPTTTTPRS----TTTTSTSRPTTTTPRSTTK 1016

Query: 810  ---C*PTNTNVECCVQALVGTRPSFLAAPHASSAQPATGLGPAGTQGTCTCIACTSHVRA 640
               C PT T           +RP+    P +++    T   P  T    T   CTS    
Sbjct: 1017 TSTCAPTTTTPRSTTTTTT-SRPT-TTTPRSTTT--TTTSRPTTTTPRSTTTPCTSRPTT 1072

Query: 639  MTSASHNYAVTDSTAGPSHPSNTPLPDPSCNRHDTECRSHLTRVRPRTVGLWCHPAPGFG 460
             T  S     T S    + P +T  P P+     +  R+  TR RP      CHP P + 
Sbjct: 1073 TTPRSTT-TTTTSRPTTTTPRSTTTPCPTTTPSASPTRTTTTR-RPCP----CHPQPPYQ 1126

Query: 459  CPPFRQLRASPSYYN 415
             PP+     +P+Y N
Sbjct: 1127 IPPWSWWYPNPTYPN 1141



EST assemble image


clone accession position
1 MX006h12_r BP086340 1 395
2 LC029b09_r AV620955 16 521
3 LC014f10_r AV619897 66 698
4 CM042b05_r AV389270 121 340
5 CM047f05_r AV388579 196 469
6 HC015g12_r AV633029 445 858
7 CM044g11_r AV389530 585 1133
8 LC025a01_r AV620648 630 1130
9 MX202c02_r BP089175 677 1021




Chlamydomonas reinhardtii
Kazusa DNA Research Institute