KCC001371A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001371A_C01 KCC001371A_c01
atcttgccatacagctaaaAGGTTACAGAGCTCAGGGAACTTCTATTTCGCGGGCTCTTC
CGGTGCTAGCATTCGCGCGTCGACCGCTCCAGGATGTCGCTCAACGCCTCGCTGGGCGGC
CTGAAGATCAAGGACCCAGAGGAGATCGAGCGGCTCATCAAGGAGAACAATGACTTGAAA
AGCCAAATCGCCGGTGGCGGTGCCAGCTCCTCGTACCAGATCCCGTACGAGGACCTGGAG
GTCCAGGACCAGATCGGCGGCGGCGGCTTCAGCCTGGTGTACCGGGGCTTCTGGAAGGGC
ACGCCCGCGGCCATCAAGAAGTGGTTTGACCCCAACCACTCCGACCAGATGGTGCAGGAG
TTCAGGGAGGAGGTGATGACGCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001371A_C01 KCC001371A_c01
         (383 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T52626 probable mitogen-activated protein kinase MAP3K delt...    53  1e-06
pir||T48544 MAP3K delta-1 protein kinase - Arabidopsis thaliana ...    53  1e-06
ref|NP_196746.2| MAP3K delta-1 protein kinase [Arabidopsis thali...    53  1e-06
ref|NP_567676.1| serine/threonine kinase -related [Arabidopsis t...    52  3e-06
ref|NP_849424.1| serine/threonine kinase -related [Arabidopsis t...    52  3e-06

>pir||T52626 probable mitogen-activated protein kinase MAP3K delta-1 [imported]
           - Arabidopsis thaliana (fragment)
           gi|2253010|emb|CAA74591.1| MAP3K delta-1 protein kinase
           [Arabidopsis thaliana]
          Length = 406

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 21/59 (35%), Positives = 38/59 (63%)
 Frame = +1

Query: 199 GASSSYQIPYEDLEVQDQIGGGGFSLVYRGFWKGTPAAIKKWFDPNHSDQMVQEFREEV 375
           G ++ ++I +EDL++ ++IG G +  VYR  W GT  A+KK+ D + S   + +F+ E+
Sbjct: 123 GEAAKWEIMWEDLQIGERIGIGSYGEVYRAEWNGTEVAVKKFLDQDFSGDALTQFKSEI 181

>pir||T48544 MAP3K delta-1 protein kinase - Arabidopsis thaliana
           gi|7573352|emb|CAB87658.1| MAP3K delta-1 protein kinase
           [Arabidopsis thaliana]
          Length = 886

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 21/59 (35%), Positives = 38/59 (63%)
 Frame = +1

Query: 199 GASSSYQIPYEDLEVQDQIGGGGFSLVYRGFWKGTPAAIKKWFDPNHSDQMVQEFREEV 375
           G ++ ++I +EDL++ ++IG G +  VYR  W GT  A+KK+ D + S   + +F+ E+
Sbjct: 637 GEAAKWEIMWEDLQIGERIGIGSYGEVYRAEWNGTEVAVKKFLDQDFSGDALTQFKSEI 695

>ref|NP_196746.2| MAP3K delta-1 protein kinase [Arabidopsis thaliana]
           gi|18700075|gb|AAL77650.1| AT5g11850/F14F18_20
           [Arabidopsis thaliana]
          Length = 880

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 21/59 (35%), Positives = 38/59 (63%)
 Frame = +1

Query: 199 GASSSYQIPYEDLEVQDQIGGGGFSLVYRGFWKGTPAAIKKWFDPNHSDQMVQEFREEV 375
           G ++ ++I +EDL++ ++IG G +  VYR  W GT  A+KK+ D + S   + +F+ E+
Sbjct: 597 GEAAKWEIMWEDLQIGERIGIGSYGEVYRAEWNGTEVAVKKFLDQDFSGDALTQFKSEI 655

>ref|NP_567676.1| serine/threonine kinase -related [Arabidopsis thaliana]
           gi|15810437|gb|AAL07106.1| putative serine/threonine
           kinase [Arabidopsis thaliana]
          Length = 735

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 21/56 (37%), Positives = 39/56 (69%)
 Frame = +1

Query: 208 SSYQIPYEDLEVQDQIGGGGFSLVYRGFWKGTPAAIKKWFDPNHSDQMVQEFREEV 375
           SS +I +EDL++ +++G G F+ V+RG W G+  AIK +FD +++   + E ++E+
Sbjct: 458 SSCEIRWEDLQLGEEVGRGSFAAVHRGVWNGSDVAIKVYFDGDYNAMTLTECKKEI 513

>ref|NP_849424.1| serine/threonine kinase -related [Arabidopsis thaliana]
           gi|7488264|pir||T05137 protein kinase homolog F7H19.240
           - Arabidopsis thaliana gi|3292831|emb|CAA19821.1|
           putative serine/threonine kinase [Arabidopsis thaliana]
           gi|7269152|emb|CAB79260.1| putative serine/threonine
           kinase [Arabidopsis thaliana] gi|17065376|gb|AAL32842.1|
           putative serine/threonine kinase [Arabidopsis thaliana]
           gi|21389625|gb|AAM48011.1| putative serine/threonine
           kinase [Arabidopsis thaliana]
          Length = 736

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 21/56 (37%), Positives = 39/56 (69%)
 Frame = +1

Query: 208 SSYQIPYEDLEVQDQIGGGGFSLVYRGFWKGTPAAIKKWFDPNHSDQMVQEFREEV 375
           SS +I +EDL++ +++G G F+ V+RG W G+  AIK +FD +++   + E ++E+
Sbjct: 459 SSCEIRWEDLQLGEEVGRGSFAAVHRGVWNGSDVAIKVYFDGDYNAMTLTECKKEI 514



EST assemble image


clone accession position
1 MXL039e06_r BP095296 1 383
2 CM042a01_r AV389264 15 283




Chlamydomonas reinhardtii
Kazusa DNA Research Institute