KCC001369A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC001369A_C01 KCC001369A_c01
AGCGCGAGGATTTTTGCACCGATATAAACATCACATCCTTAGTCGCGCTCTGGAGTATCG
GCCCCGGCAGGCTCGTTGACATCGTGCCGCTTGGGGTTAGGTCAAGCCAGTCAATCAAGC
CCGGGAACGGGGATGACCAACTGCTGAAGGGCGACTTCCTAGAGCTGCAGCGGGGGCCAA
AATGCCGCTCACACAACACGATGCGCGGCGCGACGCCCAGGCGCGCCTGACCTACGAGCC
CTTGGTGTCGAACCTGGCATATGTCTTCATGGCGAGGATGGTGTCAGGTAAAGCCAGCGC
GGGGGACACGCAGAACAGCAGGCCAGCTAACAAGTTCCTGCGCGAGAAGCCCGAGAACGC
CGAGCTGGTGAAACGGCTCCTCAAAGCCTGTAACAAGGAGCACGACCCTCAGCAATTTGT
AGATGCGGCTGATGACAACTACGCGCTGCGGCAAGGCTTCGCACACAACAAGTCGGACGC
GTGGCTGAGGCGGACCGCTGAGGACCTGCGGACTGTCGGTGCCCTGGACATGTTCCAAAA
GACACACCCTTTCCAGTGCATGATTATTGAGCACATGAACGCCTTGCTGGCCGCGCTGTG
AGGGGACTGAGCTGGACACCCACACCGTGTGCTGTGTGCGTGCGCTAATAGCGGAACGAC
GAGGCTTATGATGAGCATCCCGCGCGTGCTGGCGAGGTGGCCGTGCTGCGCTTCCTGCAC
CGGCTCGCTGGGCTGCGCGCTGGGGCCCGTGACTGGTTGCATGTTCGTGCGGCTGGGATG
TACACGGCCGCATAGCAGCAGCCGTCGGACGCAGCGGTCGTGAGCTGCTGCTTCTGGGTG
CGGGTGTGATTGCTGCTGACGAGCTCCTGGTGTGCATCTGGATGTGTGGCAGCGCCGTCA
ATTGGTGCAGCACAGCCGCCACTGCAACCGCTGCTCCCACGGCTGCTGCTGCTGCTGCTG
TTGATGTTGGCGGCCGGCAGGGCCCGCTTGGGGAAACGACGGCAGGCTGACCGTGCCAGC
AGACGGTGCCGATGTGGAGCCCGGCCCGCAGGGCCCGCTGCGGATGTGGGTTCGGGGGCG
GGTGATGAGCCCTGCCAGCCCTGCCGTGTGCCGTGTAGCACCGCCCCTCCCGAGCTTTGT
TGGGCACGGnGGGCCGCGGACAATGGGTGATGTGTGCTGTTACCGTACTTGTTTTGGCGC
ACAATTCAnacttgaggctgatacagt
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001369A_C01 KCC001369A_c01
(1227 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major] 53 1e-05
gb|AAL39574.1| LD13887p [Drosophila melanogaster] 50 8e-05
ref|NP_648321.2| CG32043-PA [Drosophila melanogaster] gi|2466166... 50 8e-05
ref|NP_639275.1| conserved hypothetical protein [Xanthomonas cam... 48 4e-04
pir||T18535 high molecular mass nuclear antigen - chicken (fragm... 47 5e-04
>gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]
Length = 1325
Score = 52.8 bits (125), Expect = 1e-05
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 1/234 (0%)
Frame = -2
Query: 1181 NSTHHPLSAAXRAQQSSGGAVLHGTRQGWQGSSPAPEPTSAAGPAGRAPHRHRLLARSAC 1002
+S+ P +++ A SS A + SS AP +S++ P+ + + SA
Sbjct: 848 SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAP 907
Query: 1001 RRFPKRALPAANINSSSSSSRGSSGCSGGCAAPIDGAATHPDAHQELVSSNHTRTQKQQL 822
A P+A+ +S+ SSS S+ + +AP +++ P A S+ +
Sbjct: 908 SSSSSSA-PSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASS 966
Query: 821 TTAASDGCCYAAVYIPAARTCNQSRAPARSPASRCRKRSTATSPARAGCSS*ASSFRY*R 642
++A S + +A + + S AP+ S +S S+A S + + S +SS
Sbjct: 967 SSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS----- 1021
Query: 641 THTAHGVGVQLSPLTARPARRSCA-Q*SCTGKGVSFGTCPGHRQSAGPQRSASA 483
+A S +A A S A S + S + P S+ P S+S+
Sbjct: 1022 APSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSS 1075
Score = 50.4 bits (119), Expect = 6e-05
Identities = 69/324 (21%), Positives = 128/324 (39%), Gaps = 3/324 (0%)
Frame = -2
Query: 1181 NSTHHPLSAAXRAQQSSGGAVLHGTRQGWQGSSPAPEPTSAAGPAGRAPHRHRLLARSAC 1002
+S+ P +++ A SS A + SS AP +S++ P+ + A S+
Sbjct: 726 SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPS--ASSSS 783
Query: 1001 RRFPKRALPAANINSSSSSSRGSSGCSGGCAAPIDGAATHPDAHQELVSSNHTRTQKQQL 822
+ P+A+ +S+ SSS S+ + +AP +++ P A SS+ +
Sbjct: 784 APSSSSSAPSASSSSAPSSSSSSAPSASSSSAP-SSSSSAPSA-----SSSSAPSSSSSA 837
Query: 821 TTAASDGCCYAAVYIPAARTCNQSRAPARSPASRCRKRSTATSPARAGCSS*ASSFRY*R 642
+A+S ++ P+A + + + + +P++ +++S A + SS A S
Sbjct: 838 PSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSS 897
Query: 641 THTAHGVGVQLSPLTARPARRSC---AQ*SCTGKGVSFGTCPGHRQSAGPQRSASATRPT 471
+A S ++ P+ S + S + S + P S+ P S+S+
Sbjct: 898 APSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSS---- 953
Query: 470 CCVRSLAAARSCHQPHLQIAEGRAPCYRL*GAVSPARRSRASRAGTC*LACCSACPPRWL 291
S ++A S + AP A S + S S + + + S+ P
Sbjct: 954 -APSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASS 1012
Query: 290 YLTPSSP*RHMPGSTPRARRSGAP 219
PSS S P A S AP
Sbjct: 1013 SSAPSS-----SSSAPSASSSSAP 1031
Score = 45.8 bits (107), Expect = 0.002
Identities = 71/331 (21%), Positives = 128/331 (38%), Gaps = 10/331 (3%)
Frame = -2
Query: 1181 NSTHHPLSAAXRAQQSSGGAVLHGTRQGWQGSSPAPEPTSAAGPAGRAPHRHRLLARSAC 1002
+S+ P +++ A SS A + SS AP +S++ P+ +
Sbjct: 666 SSSSAPSASSSSASSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS------------ 713
Query: 1001 RRFPKRALPAANINSSSSSS------RGSSGCSGGCAAPIDGAATHPDAHQELVSSNHTR 840
+ P+A+ +S+ SSS SS S +AP +++ P + S++ +
Sbjct: 714 ------SAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSS 767
Query: 839 TQKQQLTTAASDGCCYAAVYIPAARTCNQSRAPARSPASRCRKRSTATSPARAGCSS*AS 660
++A S A +A + + S AP+ S +S S++ + + S +S
Sbjct: 768 APSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASS 827
Query: 659 SFRY*RTHTAHGVGVQLSPLTARPARRSCAQ*SCTGKGVSFGTCPGHRQSAGPQRSASAT 480
S + +A +P ++ A + S + S + P S+ P S+SA
Sbjct: 828 SSAPSSSSSAPSASSSSAPSSSSSAPSA----SSSSAPSSSSSAPSASSSSAPSSSSSA- 882
Query: 479 RPTCCVRSLAAARSCHQPHLQIAEGRAPCYRL*GAVSPARRSR-ASRAGTC*LACCSACP 303
P+ S ++ S P + AP A S + S +S + + A S+ P
Sbjct: 883 -PSASSSSAPSSSSSSAP--SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAP 939
Query: 302 PRWLYLTPSSP*RHMPGST---PRARRSGAP 219
PS+ P S+ P A S AP
Sbjct: 940 SSSSSSAPSASSSSAPSSSSSAPSASSSSAP 970
Score = 40.8 bits (94), Expect = 0.049
Identities = 56/264 (21%), Positives = 105/264 (39%)
Frame = -2
Query: 1010 SACRRFPKRALPAANINSSSSSSRGSSGCSGGCAAPIDGAATHPDAHQELVSSNHTRTQK 831
+AC+ + + A + +SSS+SS SS S ++ +++ P A SS+ +
Sbjct: 658 NACKPETESSSSAPSASSSSASSSSSSAPSASSSSAPSSSSSAPSA-----SSSSAPSSS 712
Query: 830 QQLTTAASDGCCYAAVYIPAARTCNQSRAPARSPASRCRKRSTATSPARAGCSS*ASSFR 651
+A+S ++ P+A + + + + +P++ +++S A + SS A S
Sbjct: 713 SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 772
Query: 650 Y*RTHTAHGVGVQLSPLTARPARRSCAQ*SCTGKGVSFGTCPGHRQSAGPQRSASATRPT 471
+A S +A A S A S + S + S+ ++S++ P+
Sbjct: 773 SSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPS 832
Query: 470 CCVRSLAAARSCHQPHLQIAEGRAPCYRL*GAVSPARRSRASRAGTC*LACCSACPPRWL 291
S ++A S + AP + +P+ S A A + S+ P
Sbjct: 833 ----SSSSAPSASSSSAPSSSSSAPSAS--SSSAPSSSSSAPSASSSSAPSSSSSAPS-- 884
Query: 290 YLTPSSP*RHMPGSTPRARRSGAP 219
+ SS S P A S AP
Sbjct: 885 -ASSSSAPSSSSSSAPSASSSSAP 907
Score = 40.8 bits (94), Expect = 0.049
Identities = 38/169 (22%), Positives = 70/169 (40%)
Frame = -2
Query: 1160 SAAXRAQQSSGGAVLHGTRQGWQGSSPAPEPTSAAGPAGRAPHRHRLLARSACRRFPKRA 981
S+A + SS + + S+P+ +SA + AP A S+ +
Sbjct: 936 SSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS------S 989
Query: 980 LPAANINSSSSSSRGSSGCSGGCAAPIDGAATHPDAHQELVSSNHTRTQKQQLTTAASDG 801
A + +SSS+ S SS S ++ +++ P A S+ + ++A S
Sbjct: 990 SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 1049
Query: 800 CCYAAVYIPAARTCNQSRAPARSPASRCRKRSTATSPARAGCSS*ASSF 654
+ +A + + S AP+ S +S S+A S + + S +SSF
Sbjct: 1050 SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSF 1098
Score = 37.7 bits (86), Expect = 0.42
Identities = 33/133 (24%), Positives = 62/133 (45%)
Frame = -2
Query: 1181 NSTHHPLSAAXRAQQSSGGAVLHGTRQGWQGSSPAPEPTSAAGPAGRAPHRHRLLARSAC 1002
+S+ P +++ A SS A + SS AP +S++ P+ + A S+
Sbjct: 988 SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPS---ASSSS 1044
Query: 1001 RRFPKRALPAANINSSSSSSRGSSGCSGGCAAPIDGAATHPDAHQELVSSNHTRTQKQQL 822
+ P+A+ +S+ SSS S+ + +AP +++ P A SS+ + L
Sbjct: 1045 APSSSSSAPSASSSSAPSSSSSSAPSASSSSAP-SSSSSAPSAS----SSSAPSSSSSFL 1099
Query: 821 TTAASDGCCYAAV 783
+ + SDG C++ V
Sbjct: 1100 SGSGSDGGCHSDV 1112
>gb|AAL39574.1| LD13887p [Drosophila melanogaster]
Length = 479
Score = 50.1 bits (118), Expect = 8e-05
Identities = 53/191 (27%), Positives = 74/191 (37%), Gaps = 14/191 (7%)
Frame = -1
Query: 1227 TVSASSXNCAPKQVR*QHTS--PIVRGPPCPTKLGRGGATRHTA--------GLAGLITR 1078
T +++ P+Q Q + P+ P KL A+ TA + G T
Sbjct: 221 TTTSTPVKQTPQQQHQQQSEQDPLAPNSPATPKLAAAAASAATATPATPVATSMLGAATP 280
Query: 1077 PRTHIRSGPCGPGSTSAPSAGTVSLPSFPQAGPAGRQHQQQQQQQPWEQRLQWRLCCTN* 898
+ R+ P P + AGT + P Q +QHQQQQQQQ +Q+ Q L
Sbjct: 281 AQAVPRTRPATPTMPAGAVAGTPTTPQHQQQQHLHQQHQQQQQQQQQQQQQQHML----- 335
Query: 897 RRCHTSRCTPGARQQQSHPH--PEAAAHDRCVRRLLLCGRVHPSRTNMQPVTGPSAQPSE 724
+ HT P Q SHPH P + H L G P+R++ + P P
Sbjct: 336 QHPHTH---PHPHAQHSHPHTLPHSLPHH------LQPGT--PTRSSHPQLQHPHHYPPS 384
Query: 723 PVQEAQH--GH 697
P H GH
Sbjct: 385 PHSHPHHQTGH 395
>ref|NP_648321.2| CG32043-PA [Drosophila melanogaster] gi|24661666|ref|NP_729500.1|
CG32043-PB [Drosophila melanogaster]
gi|23093828|gb|AAF50261.2| CG32043-PA [Drosophila
melanogaster] gi|23093829|gb|AAF50260.2| CG32043-PB
[Drosophila melanogaster]
Length = 783
Score = 50.1 bits (118), Expect = 8e-05
Identities = 53/191 (27%), Positives = 74/191 (37%), Gaps = 14/191 (7%)
Frame = -1
Query: 1227 TVSASSXNCAPKQVR*QHTS--PIVRGPPCPTKLGRGGATRHTA--------GLAGLITR 1078
T +++ P+Q Q + P+ P KL A+ TA + G T
Sbjct: 525 TTTSTPVKQTPQQQHQQQSEQDPLAPNSPATPKLAAAAASAATATPATPVATSMLGAATP 584
Query: 1077 PRTHIRSGPCGPGSTSAPSAGTVSLPSFPQAGPAGRQHQQQQQQQPWEQRLQWRLCCTN* 898
+ R+ P P + AGT + P Q +QHQQQQQQQ +Q+ Q L
Sbjct: 585 AQAVPRTRPATPTMPAGAVAGTPTTPQHQQQQHLHQQHQQQQQQQQQQQQQQHML----- 639
Query: 897 RRCHTSRCTPGARQQQSHPH--PEAAAHDRCVRRLLLCGRVHPSRTNMQPVTGPSAQPSE 724
+ HT P Q SHPH P + H L G P+R++ + P P
Sbjct: 640 QHPHTH---PHPHAQHSHPHTLPHSLPHH------LQPGT--PTRSSHPQLQHPHHYPPS 688
Query: 723 PVQEAQH--GH 697
P H GH
Sbjct: 689 PHSHPHHQTGH 699
>ref|NP_639275.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris
str. ATCC 33913] gi|21115193|gb|AAM43157.1| conserved
hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 261
Score = 47.8 bits (112), Expect = 4e-04
Identities = 44/138 (31%), Positives = 57/138 (40%), Gaps = 16/138 (11%)
Frame = -3
Query: 1039 LHIGTVCWHG-QPAVVSPSGPCRP---------PTSTAAAAAAVGAAVAVAAVLHQLTAL 890
L+ G W QPA V P+ P +P PT AAA AV A VA AA A
Sbjct: 13 LNAGVALWWALQPAAVPPAAPSQPAGVARLELLPTPPTAAAPAV-ATVAPAAAPVPPPAA 71
Query: 889 PHIQMHTRSSSAAITPAPRSSSSRPLRPTAAAMRPCTSQPHEHATSHGPQRAAQRAGA-- 716
P Q + P P ++++ AA+ P + P E TS GP A A A
Sbjct: 72 PAAQPAVAAVDNTPPPTPAATAAVTPAAVAASPPPAVAAPAERCTSLGPYAARAEADAAL 131
Query: 715 ----GSAARPPRQHARDA 674
G A+R + +DA
Sbjct: 132 PALRGQASRTSVREDKDA 149
>pir||T18535 high molecular mass nuclear antigen - chicken (fragment)
gi|2754696|dbj|BAA24137.1| high molecular mass nuclear
antigen [Gallus gallus]
Length = 1151
Score = 47.4 bits (111), Expect = 5e-04
Identities = 51/185 (27%), Positives = 64/185 (34%), Gaps = 20/185 (10%)
Frame = -3
Query: 1183 VTAHITHCPRPXVPNKAREGRCYTAHG---------------RAGRAHHPPPNPHPQRAL 1049
VTA P P VP + + TA A A PPP P+ A
Sbjct: 294 VTAEAKPAPSPSVPKATTDTKAVTATAPKAGPDVKPAVAVCAEAKPAPPPPPQQLPKAAA 353
Query: 1048 RAG-----LHIGTVCWHGQPAVVSPSGPCRPPTSTAAAAAAVGAAVAVAAVLHQLTALPH 884
A L T HG P S + PP AAAA V A AV P
Sbjct: 354 AAAPTGTELKPATAPPHGSPRANSHTVTVTPPNVPRAAAATVPTAGAV----------PK 403
Query: 883 IQMHTRSSSAAITPAPRSSSSRPLRPTAAAMRPCTSQPHEHATSHGPQRAAQRAGAGSAA 704
T ++A P P+++ P P A R T+ A PQ+ +A + A
Sbjct: 404 ASTGTTPAAAPQQPVPKAAPVTPPSPQQAVPRAATAA----AAPVTPQQPVTKAATTTNA 459
Query: 703 RPPRQ 689
PP Q
Sbjct: 460 TPPPQ 464
Score = 35.8 bits (81), Expect = 1.6
Identities = 39/152 (25%), Positives = 55/152 (35%), Gaps = 1/152 (0%)
Frame = -3
Query: 1153 PXVPNKAREGRCYTAHGRAGRAHHPPPNPHPQRALRAGLHIGTVCWHGQPAVVSPSGPCR 974
P P+K +G A PP +P P +A G P P+G
Sbjct: 66 PTPPSKPTDGADAAPKASAELTSPPPASPSPPDGPKAPSGAGEAEAGTPPPSQGPAG--T 123
Query: 973 PPTSTAAAAAAVGAAVA-VAAVLHQLTALPHIQMHTRSSSAAITPAPRSSSSRPLRPTAA 797
PP S AA A G A + P Q ++++AA P S++S P P A
Sbjct: 124 PPPSQGAAGAPKGDGTAQPSGTKSGADGKPAAQDVPKATTAATEARPASAAS-PTVPKAT 182
Query: 796 AMRPCTSQPHEHATSHGPQRAAQRAGAGSAAR 701
A + + A AA A + SA +
Sbjct: 183 AEATAVTAASQSAPKAATDAAAVTAASQSAPK 214
Score = 34.7 bits (78), Expect = 3.5
Identities = 43/160 (26%), Positives = 65/160 (39%), Gaps = 15/160 (9%)
Frame = -2
Query: 1091 GSSPAPEPTSA-----AGPAGRAPHRHRLL-ARSACRRFPKRALPAANINSSSSSSRGSS 930
G+ +P PT+A A PA A +A P A P SSSSSS SS
Sbjct: 987 GARLSPGPTAATDGPKASPAATADVTEAATDVTAAATAVPAEAAPTKAKRSSSSSSSSSS 1046
Query: 929 GCSGGCAAPIDGAATHPDAHQELVSSNHTRTQ------KQQLTTAASDG---CCYAAVYI 777
S ++ +++ D+ SN +QQ+T A+ AAV
Sbjct: 1047 SSSSSSSSS-SSSSSDSDSSSSSSESNPASPAPAVGDGQQQMTPGAAQSVPPVTEAAVQE 1105
Query: 776 PAARTCNQSRAPARSPASRCRKRSTATSPARAGCSS*ASS 657
AA + A +R +KR+ ++S + + SS +SS
Sbjct: 1106 AAAAAAAAAGAEREGRPTRRKKRTRSSSSSSSSSSSSSSS 1145
EST assemble image
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clone |
accession |
position |
| 1 |
HC064c11_r |
AV636800 |
1 |
525 |
| 2 |
LC066c08_r |
AV623612 |
114 |
594 |
| 3 |
LC080c04_r |
AV624616 |
125 |
625 |
| 4 |
LC034h06_r |
AV621355 |
139 |
631 |
| 5 |
HC003b04_r |
AV632037 |
526 |
1024 |
| 6 |
MX204g08_r |
BP089309 |
583 |
1061 |
| 7 |
CM041h07_r |
AV389433 |
784 |
1336 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute