KCC001365A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001365A_C01 KCC001365A_c01
CGCTTCAGTTCAGGCGGTGTGATGTGGTGCGGGCTCAGCCCAGTTTTCTTTGGAGCGGAC
AACCAACTCCACTGTCGTGACGTGGCTATACTGGTTGCTCATCGGTAGGTCCATCACATG
GTATCTATTGGCGCCACGTTTGCATGGTGGGAGGATATACCGCCTTGCATGTGTGGATAT
GATACTGCGGCCTTGTTGTTACGGCCGAGTGCGTCTTTGCAGTGTGATTACTGGAACCAG
GCGCATATATGCTCCTGTGCTTTCCAGTGCAGTCATTGCCGGGTTTACGGGAAGGATGGT
TATGCCTGTCGCAGAGTTTGGCTTTGATGCTGTGAATGCTTCCGTATTGCGTCGTAGGAT
TAGAGGGAAGCATGACTTCGGAATTGATGAGGAGCACGCGCATGTGCCGGGGTATACATT
TCTGGGGCAGGGTTGCTGTGGATCAAATATTCATGCCTTTGATGTTTGGGGGGGCAAATG
CCTACCGGCATGAGTTGGGCGAGAACGTTGTTCGCTCCCTGTGGCGCTGAGATGCCCCAA
ACTCAAACCTTCCACGGCGTAATGAAGTCTGGGCCGGGCAACCAGCAAACTAGATTCCAG
TTACCCGGGTGCGGCGGTGCGCAGCTTCGTCATCCCTTAATGGCGGCGCGTTGTGACCCG
GATGTCTGCATCAAGGTTTGTTTGTCCTGCGTTGCCCATGTTGTCTGGTGTTGCCGGCCG
AGAGTGTCTGTTATCATTTAAAATTTCCTGGAGTTTCCGTATCCTTGTTCGGCGGTCTGT
AGTTGTGAACTTTGCAGTACTAGTGTTGGCTCGTGCCAACCGAAGGCTCAGGATACGAGG
GTGCCGTCAGGGGCTGATCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001365A_C01 KCC001365A_c01
         (860 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||S17855 peptidylglycine monooxygenase (EC 1.14.17.3) - Afric...    34  2.7
sp|P08478|AMD1_XENLA Peptidyl-glycine alpha-amidating monooxygen...    34  2.7
sp|P12890|AMD2_XENLA Peptidyl-glycine alpha-amidating monooxygen...    34  2.7
ref|XP_125754.1| RIKEN cDNA A030009A09 [Mus musculus]                  33  4.6
ref|ZP_00061475.1| COG5337: Spore coat assembly protein [Clostri...    33  4.6

>pir||S17855 peptidylglycine monooxygenase (EC 1.14.17.3) - African clawed frog
           gi|64531|emb|CAA44615.1| Peptidylhydroxyglycine N-C
           lyase [Xenopus laevis]
          Length = 935

 Score = 34.3 bits (77), Expect = 2.7
 Identities = 16/53 (30%), Positives = 25/53 (46%)
 Frame = -2

Query: 307 RHNHPSRKPGNDCTGKHRSIYAPGSSNHTAKTHSAVTTRPQYHIHTCKAVYPP 149
           R+   +R   NDC G  R + +PGSS++T        T  +   + CK+   P
Sbjct: 31  RYEESTRSLSNDCLGTTRPVMSPGSSDYTLDIRMPGVTPTESDTYLCKSYRLP 83

>sp|P08478|AMD1_XENLA Peptidyl-glycine alpha-amidating monooxygenase I precursor (Peptide
           C-terminal alpha-amidating enzyme I) (AE-I)
           gi|66350|pir||URXLA1 peptidylglycine monooxygenase (EC
           1.14.17.3) I precursor - African clawed frog
           gi|213936|gb|AAA49640.1| amidating enzyme precursor
           gi|27694588|gb|AAH43987.1| Unknown (protein for
           MGC:52603) [Xenopus laevis]
          Length = 400

 Score = 34.3 bits (77), Expect = 2.7
 Identities = 16/53 (30%), Positives = 25/53 (46%)
 Frame = -2

Query: 307 RHNHPSRKPGNDCTGKHRSIYAPGSSNHTAKTHSAVTTRPQYHIHTCKAVYPP 149
           R+   +R   NDC G  R + +PGSS++T        T  +   + CK+   P
Sbjct: 31  RYEESTRSLSNDCLGTTRPVMSPGSSDYTLDIRMPGVTPTESDTYLCKSYRLP 83

>sp|P12890|AMD2_XENLA Peptidyl-glycine alpha-amidating monooxygenase II precursor
           (Peptide C-terminal alpha-amidating enzyme II) (AE-II)
           gi|66354|pir||URXLA2 peptidylglycine monooxygenase (EC
           1.14.17.3) II precursor - African clawed frog
           gi|214015|gb|AAA49667.1| alpha-amidating enzyme
           precursor
          Length = 875

 Score = 34.3 bits (77), Expect = 2.7
 Identities = 16/53 (30%), Positives = 25/53 (46%)
 Frame = -2

Query: 307 RHNHPSRKPGNDCTGKHRSIYAPGSSNHTAKTHSAVTTRPQYHIHTCKAVYPP 149
           R+   +R   NDC G  R + +PGSS++T        T  +   + CK+   P
Sbjct: 33  RYEESTRSLSNDCLGTTRPVMSPGSSDYTLDIRMPGVTPTESDTYLCKSYRLP 85

>ref|XP_125754.1| RIKEN cDNA A030009A09 [Mus musculus]
          Length = 221

 Score = 33.5 bits (75), Expect = 4.6
 Identities = 17/57 (29%), Positives = 21/57 (36%)
 Frame = +1

Query: 652 CDPDVCIKVCLSCVAHVVWCCRPRVSVII*NFLEFPYPCSAVCSCELCSTSVGSCQP 822
           C P  C+ VC + V     CC+P                  VC   +CS S   CQP
Sbjct: 114 CQPSCCVPVCCTPVCCTPVCCKP------------------VCCTPICSGSSSCCQP 152

>ref|ZP_00061475.1| COG5337: Spore coat assembly protein [Clostridium thermocellum ATCC
           27405]
          Length = 567

 Score = 33.5 bits (75), Expect = 4.6
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +1

Query: 469 GGQMPTGMSWARTLFAPCGAEMPQTQTFHGVMKSGPGNQQTRFQ 600
           GGQMP GM     +  P G + P    F G M+    NQQ+  Q
Sbjct: 496 GGQMPNGMQMPNGMQMPNGMQPPGNMRFRGGMEMFRDNQQSETQ 539



EST assemble image


clone accession position
1 MX249e03_r BP092080 1 556
2 CM041f05_r AV389456 1 565
3 MX225g11_r BP090573 1 408
4 LC005f05_r AV619245 350 860




Chlamydomonas reinhardtii
Kazusa DNA Research Institute