KCC001363A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001363A_C01 KCC001363A_c01
tcgtgtggagccacggtgggagccacgtggaggtggagggctcgtttgacaactggacga
cgcgacaaccgctacaaaagTCCGGAAAGGACTTCACCATCATCAAGCTGCTCCCACCGG
GCGTGTACCAGTACAAGTTCATTGTGGACGGCGAGTGGAAGTACGACCCCAACCAGCCTG
CCATGTTTGACGAGATGCGCAACGTGAACAACGTTATCGAGGTGCACGAGTACGTTCCTG
AGAACCTGGAGGGAGTCAGCGGCTTTGACCCGCCGCCCTCGCCGCCGTCCAGTTACAACT
GCCCGACGCCGGTGGCAGACGACTATGCCAAGGAGCCGCCCGTGATGCCGCCACATCTGC
AACTCACGCTGCTCAACGTGCCGCCGGCTCTGGATGCCCAGGCGGTGCTGCCGCGCCCGC
AGCACGTCATCCTCAATCACGTGTACTGCCAACGGGGGCAGAGCGTGCAGGCGCTGGTGG
TGGGCACAACCAGCCGGTACAAGTCCAAGTACATCACCACTGTCATGTACAAACCCAAGG
CACGGCGGCGCGTACTGGACGGAAGCATCAAGACCGACCAGTAGCGGACCCGTACGCCCC
GCACGCCCCTAGCTAGTGGGAAGAAGCGGACAACGGGCTTGAGCCCTGCTTTGGGTCACG
CTCAGGACATTTGTGTCGTCTGGGCGCTACAGCGGGTTGTTGCGTGCAGGTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001363A_C01 KCC001363A_c01
         (712 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_193369.1| kinase like protein [Arabidopsis thaliana] gi|7...   219  4e-56
gb|AAG41995.1|AF322108_1 SNF1-related kinase complex anchoring p...   218  1e-55
emb|CAB64719.1| AKIN beta2 [Arabidopsis thaliana] gi|13430672|gb...   217  1e-55
gb|AAO61677.1| AKIN beta2 [Medicago truncatula]                       211  1e-53
emb|CAB64718.1| AKIN gamma [Arabidopsis thaliana] gi|21593717|gb...   196  4e-49

>ref|NP_193369.1| kinase like protein [Arabidopsis thaliana] gi|7485077|pir||C71430
           hypothetical protein - Arabidopsis thaliana
           gi|2244993|emb|CAB10413.1| kinase like protein
           [Arabidopsis thaliana] gi|7268385|emb|CAB78678.1| kinase
           like protein [Arabidopsis thaliana]
          Length = 259

 Score =  219 bits (557), Expect = 4e-56
 Identities = 100/182 (54%), Positives = 139/182 (75%), Gaps = 2/182 (1%)
 Frame = +3

Query: 6   WSHGGSHVEVEGSFDNWTTRQPLQKSGKDFTIIKLLPPGVYQYKFIVDGEWKYDPNQPAM 185
           W HGG  + VEGS+DNW TR  LQ+SGKDFTI+K+LP GVY+Y+FIVDG+W++ P  P  
Sbjct: 78  WCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLA 137

Query: 186 FDEMRNVNNVIEVHEYVPENLEGVSGFDPPPSPPSSYNCPTPVADDYAKEPPVMPPHLQL 365
            D+  N  N++++ +YVPE+++ +SGFDPP SP +SY+     A+DY+KEPPV+PPHLQ+
Sbjct: 138 RDDAGNTFNILDLQDYVPEDIQSISGFDPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQM 197

Query: 366 TLLNVPPA-LDAQAVLPRPQHVILNHVYCQRGQSVQALV-VGTTSRYKSKYITTVMYKPK 539
           TLLN+P A  D  + LPRPQHVILNH+Y Q+G+S  ++V +G+T R+ +KY+T V+YK  
Sbjct: 198 TLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSL 257

Query: 540 AR 545
            R
Sbjct: 258 QR 259

>gb|AAG41995.1|AF322108_1 SNF1-related kinase complex anchoring protein SIP1 [Lycopersicon
           esculentum]
          Length = 227

 Score =  218 bits (554), Expect = 1e-55
 Identities = 100/178 (56%), Positives = 138/178 (77%), Gaps = 2/178 (1%)
 Frame = +3

Query: 6   WSHGGSHVEVEGSFDNWTTRQPLQKSGKDFTIIKLLPPGVYQYKFIVDGEWKYDPNQPAM 185
           W+  G  V VEGS+DNW +R PLQKSGKDFTI+K+LP GVYQY+FIVDG+W+  P+ P +
Sbjct: 46  WTLDGKEVAVEGSWDNWKSRMPLQKSGKDFTILKVLPSGVYQYRFIVDGQWRCSPDLPCV 105

Query: 186 FDEMRNVNNVIEVHEYVPENLEGVSGFDPPPSPPSSYNCPTPVADDYAKEPPVMPPHLQL 365
            DE  N  N++++ +YVPE++E + GF+PP SP SSYN    V++DYAKEPPV+PPHLQ+
Sbjct: 106 QDEAGNTYNLLDMKDYVPEDIESIYGFEPPQSPDSSYNNLHLVSEDYAKEPPVVPPHLQM 165

Query: 366 TLLNVPPA-LDAQAVLPRPQHVILNHVYCQRGQSVQALV-VGTTSRYKSKYITTVMYK 533
           TLLNV P+ ++    L RPQHV+LNH+Y Q+ +S  ++V +G+T+R+ SKY+T V+YK
Sbjct: 166 TLLNVSPSHMEIPPPLSRPQHVVLNHLYMQKDRSTPSVVALGSTNRFLSKYVTVVLYK 223

>emb|CAB64719.1| AKIN beta2 [Arabidopsis thaliana]
           gi|13430672|gb|AAK25958.1|AF360248_1 putative kinase
           [Arabidopsis thaliana]
          Length = 289

 Score =  217 bits (553), Expect = 1e-55
 Identities = 99/182 (54%), Positives = 139/182 (75%), Gaps = 2/182 (1%)
 Frame = +3

Query: 6   WSHGGSHVEVEGSFDNWTTRQPLQKSGKDFTIIKLLPPGVYQYKFIVDGEWKYDPNQPAM 185
           W HGG  + VEGS+DNW TR  LQ+SGKDFTI+K+LP GVY+Y+FIVDG+W++ P  P  
Sbjct: 108 WCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLA 167

Query: 186 FDEMRNVNNVIEVHEYVPENLEGVSGFDPPPSPPSSYNCPTPVADDYAKEPPVMPPHLQL 365
            D+  N  N++++ +YVPE+++ +SGF+PP SP +SY+     A+DY+KEPPV+PPHLQ+
Sbjct: 168 RDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQM 227

Query: 366 TLLNVPPA-LDAQAVLPRPQHVILNHVYCQRGQSVQALV-VGTTSRYKSKYITTVMYKPK 539
           TLLN+P A  D  + LPRPQHVILNH+Y Q+G+S  ++V +G+T R+ +KY+T V+YK  
Sbjct: 228 TLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSL 287

Query: 540 AR 545
            R
Sbjct: 288 QR 289

>gb|AAO61677.1| AKIN beta2 [Medicago truncatula]
          Length = 287

 Score =  211 bits (536), Expect = 1e-53
 Identities = 98/182 (53%), Positives = 137/182 (74%), Gaps = 2/182 (1%)
 Frame = +3

Query: 6   WSHGGSHVEVEGSFDNWTTRQPLQKSGKDFTIIKLLPPGVYQYKFIVDGEWKYDPNQPAM 185
           WS+ G  V VEGS+DNW TR PLQ+SGKDFTI+K+LP GVYQ++FIVDG+W+Y P+ P  
Sbjct: 106 WSYDGKEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQFRFIVDGQWRYAPDLPWA 165

Query: 186 FDEMRNVNNVIEVHEYVPENLEGVSGFDPPPSPPSSYNCPTPVADDYAKEPPVMPPHLQL 365
            D+  N  N++++ + VPE+L  +S F+PP SP SSYN     ++DYAKEPP++PP +Q 
Sbjct: 166 RDDAANTYNILDLQDSVPEDLGSISSFEPPKSPDSSYNNLHLSSEDYAKEPPLVPPFMQA 225

Query: 366 TLLNVPPA-LDAQAVLPRPQHVILNHVYCQRGQSVQALV-VGTTSRYKSKYITTVMYKPK 539
           TLLNVP A ++ Q ++ RPQHV+LNH+Y Q+G+S  ++V +G+T R+ +KY+T VMYK  
Sbjct: 226 TLLNVPSANMEFQPLVSRPQHVVLNHLYMQKGKSSPSVVALGSTHRFVAKYVTVVMYKSL 285

Query: 540 AR 545
            R
Sbjct: 286 QR 287

>emb|CAB64718.1| AKIN gamma [Arabidopsis thaliana] gi|21593717|gb|AAM65684.1| AKIN
           beta1 [Arabidopsis thaliana]
          Length = 284

 Score =  196 bits (497), Expect = 4e-49
 Identities = 94/181 (51%), Positives = 128/181 (69%), Gaps = 1/181 (0%)
 Frame = +3

Query: 6   WSHGGSHVEVEGSFDNWTTRQPLQKSGKDFTIIKLLPPGVYQYKFIVDGEWKYDPNQPAM 185
           W+ GG+ V VEGS+DNW +R+ LQKSGKD +I+ +LP G+Y YK IVDGE KY P+ P +
Sbjct: 107 WNQGGNDVTVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFV 166

Query: 186 FDEMRNVNNVIEVHEYVPENLEGVSGFDPPPSPPSSYNCPTPVADDYAKEPPVMPPHLQL 365
            DE+ NV N+++VH +VPEN E +  F+ PPSP  SY    P A+DYAKEP  +PP L L
Sbjct: 167 ADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHL 226

Query: 366 TLLNVPPALDAQAVLPRPQHVILNHVYCQRGQSVQALV-VGTTSRYKSKYITTVMYKPKA 542
           TLL      +  A+  +PQHV+LNHV+ ++G + Q++V +G T R++SKYIT V+YKP  
Sbjct: 227 TLLG---TTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLT 283

Query: 543 R 545
           R
Sbjct: 284 R 284



EST assemble image


clone accession position
1 LC041g06_r AV621853 1 537
2 CM041d07_r AV389429 154 712
3 CM054g03_r AV390022 156 415




Chlamydomonas reinhardtii
Kazusa DNA Research Institute