Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001360A_C01 KCC001360A_c01
(574 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P23400|THIM_CHLRE Thioredoxin M-type, chloroplast precursor (... 279 2e-74
emb|CAA55398.1| thioredoxin m [Chlamydomonas reinhardtii] 258 3e-68
pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast Thioredoxin M ... 219 2e-56
emb|CAA44209.1| thioredoxin Ch2 [Chlamydomonas reinhardtii] 219 2e-56
ref|NP_894958.1| Thioredoxin [Prochlorococcus marinus str. MIT 9... 161 5e-39
>sp|P23400|THIM_CHLRE Thioredoxin M-type, chloroplast precursor (TRX-M) (Thioredoxin CH2)
gi|1361953|pir||S57774 thioredoxin m precursor,
chloroplast - Chlamydomonas reinhardtii
gi|840747|emb|CAA56851.1| thioredoxin m [Chlamydomonas
reinhardtii]
Length = 140
Score = 279 bits (714), Expect = 2e-74
Identities = 140/140 (100%), Positives = 140/140 (100%)
Frame = +3
Query: 51 MALVARRAAVPSARSSARPAFARAAPRRSVVVRAEAGAVNDDTFKNVVLESSVPVLVDFW 230
MALVARRAAVPSARSSARPAFARAAPRRSVVVRAEAGAVNDDTFKNVVLESSVPVLVDFW
Sbjct: 1 MALVARRAAVPSARSSARPAFARAAPRRSVVVRAEAGAVNDDTFKNVVLESSVPVLVDFW 60
Query: 231 APWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCE 410
APWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCE
Sbjct: 61 APWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCE 120
Query: 411 TIIGAVPKATIVQTVEKYLN 470
TIIGAVPKATIVQTVEKYLN
Sbjct: 121 TIIGAVPKATIVQTVEKYLN 140
>emb|CAA55398.1| thioredoxin m [Chlamydomonas reinhardtii]
Length = 128
Score = 258 bits (660), Expect = 3e-68
Identities = 128/128 (100%), Positives = 128/128 (100%)
Frame = +3
Query: 87 ARSSARPAFARAAPRRSVVVRAEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAP 266
ARSSARPAFARAAPRRSVVVRAEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAP
Sbjct: 1 ARSSARPAFARAAPRRSVVVRAEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAP 60
Query: 267 VVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIV 446
VVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIV
Sbjct: 61 VVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIV 120
Query: 447 QTVEKYLN 470
QTVEKYLN
Sbjct: 121 QTVEKYLN 128
>pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast Thioredoxin M Ch2 From The
Green Alga Chlamydomonas Reinhardtii
Length = 107
Score = 219 bits (558), Expect = 2e-56
Identities = 106/106 (100%), Positives = 106/106 (100%)
Frame = +3
Query: 153 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE 332
EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE
Sbjct: 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE 61
Query: 333 SPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYLN 470
SPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYLN
Sbjct: 62 SPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYLN 107
>emb|CAA44209.1| thioredoxin Ch2 [Chlamydomonas reinhardtii]
Length = 106
Score = 219 bits (558), Expect = 2e-56
Identities = 106/106 (100%), Positives = 106/106 (100%)
Frame = +3
Query: 153 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE 332
EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE
Sbjct: 1 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE 60
Query: 333 SPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYLN 470
SPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYLN
Sbjct: 61 SPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYLN 106
>ref|NP_894958.1| Thioredoxin [Prochlorococcus marinus str. MIT 9313]
gi|33640847|emb|CAE21302.1| Thioredoxin [Prochlorococcus
marinus str. MIT 9313]
Length = 107
Score = 161 bits (408), Expect = 5e-39
Identities = 72/106 (67%), Positives = 91/106 (84%)
Frame = +3
Query: 150 AEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTD 329
+ A AV D +F+ VL+S VPVLVDFWAPWCGPCR++AP+VDEIA E++ K+K KLNTD
Sbjct: 2 SNAAAVTDASFEQDVLQSDVPVLVDFWAPWCGPCRMVAPIVDEIAKEFESKIKVFKLNTD 61
Query: 330 ESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 467
E+PNVAS+YGIRSIPT+MVFKGG+K +T++GAVPKAT+ T+ KYL
Sbjct: 62 ENPNVASQYGIRSIPTLMVFKGGQKVDTVVGAVPKATLSGTISKYL 107
