KCC001348A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001348A_C01 KCC001348A_c01
ttacctccacctggtcctggagttcgtgccggacacggtgtaccgcatcagcaagcacta
cgcgaagaacaaccagcGGATGCCCAACCTGTTCGTTAAGCTGTACGCATACCAGATGTG
CCGCGCGCTCAACTCGATCCACAAAATGGGCATCTGCCACCGCGACATCAAGCCCCAGAA
CCTACTGGTGAACACGGAGACGCACCAGCTGAAGCTGTGCGACTTCGGCAGCGCCAAGGT
GCTGGTGAAGGGGGAGCCCAACATCTCGTACATTTGCTCACGCTACTATCGCGCGCCGGA
GCTCATCTTTGGCGCAACCGACTACACCAGCGCCATCGACGTCTGGTCGGTGGGCTGCGT
GCTGGCGGAGCTGCTGCTGGGGCAGCCGCTATTCCCGGGTGAGAGCGGCGTGGACCAGCT
GGTGGAGATCATCAAGGTGCTGGGCACGCCCACGCGCGAGGAGATTAACGCAATGAACCC
CAACTACACGGAGTTCAAGTTCCCCCAGATCAAGGCGCACCCCTGGACGAAGGTGTTCAG
CAAGCGGATGCCGCCGGACGCCGTGGACCTGGTGTCCAAGCTGCTGCAGTACGCGCCCCA
GAAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001348A_C01 KCC001348A_c01
         (605 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAQ23111.1| shaggy-related protein kinase 1 [Physcomitrella p...   354  5e-97
gb|AAQ23106.1| shaggy-related protein kinase 1 [Physcomitrella p...   354  5e-97
pir||S51105 shaggy protein kinase 4 (EC 2.7.1.-) - garden petuni...   353  8e-97
gb|AAQ23108.1| shaggy-related protein kinase 3 [Physcomitrella p...   353  1e-96
gb|AAQ23110.1| shaggy-related protein kinase 5 [Physcomitrella p...   352  2e-96

>gb|AAQ23111.1| shaggy-related protein kinase 1 [Physcomitrella patens]
          Length = 410

 Score =  354 bits (909), Expect = 5e-97
 Identities = 168/200 (84%), Positives = 186/200 (93%), Gaps = 1/200 (0%)
 Frame = +2

Query: 2   YLHLVLEFVPDTVYRISKHYAKNNQRMPNLFVKLYAYQMCRALNSIHK-MGICHRDIKPQ 178
           YL+LVLE+VP+TVYRI+KHY + NQRMP L+VKLY YQ+CR+L  IH  +G+CHRDIKPQ
Sbjct: 144 YLNLVLEYVPETVYRIAKHYNRMNQRMPLLYVKLYTYQICRSLAYIHNGIGVCHRDIKPQ 203

Query: 179 NLLVNTETHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATDYTSAIDVWSVGC 358
           NLLVN  THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT+YT+AID+WS+GC
Sbjct: 204 NLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSMGC 263

Query: 359 VLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEINAMNPNYTEFKFPQIKAHPWTKVF 538
           V+AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI  MNPNYTEFKFPQIKAHPW KVF
Sbjct: 264 VMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVF 323

Query: 539 SKRMPPDAVDLVSKLLQYAP 598
            KRMPP+AVDLVS+LLQY+P
Sbjct: 324 HKRMPPEAVDLVSRLLQYSP 343

>gb|AAQ23106.1| shaggy-related protein kinase 1 [Physcomitrella patens]
          Length = 422

 Score =  354 bits (909), Expect = 5e-97
 Identities = 168/200 (84%), Positives = 186/200 (93%), Gaps = 1/200 (0%)
 Frame = +2

Query: 2   YLHLVLEFVPDTVYRISKHYAKNNQRMPNLFVKLYAYQMCRALNSIHK-MGICHRDIKPQ 178
           YL+LVLE+VP+TVYRI+KHY + NQRMP L+VKLY YQ+CR+L  IH  +G+CHRDIKPQ
Sbjct: 156 YLNLVLEYVPETVYRIAKHYNRMNQRMPLLYVKLYTYQICRSLAYIHNGIGVCHRDIKPQ 215

Query: 179 NLLVNTETHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATDYTSAIDVWSVGC 358
           NLLVN  THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT+YT+AID+WS+GC
Sbjct: 216 NLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSMGC 275

Query: 359 VLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEINAMNPNYTEFKFPQIKAHPWTKVF 538
           V+AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI  MNPNYTEFKFPQIKAHPW KVF
Sbjct: 276 VMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVF 335

Query: 539 SKRMPPDAVDLVSKLLQYAP 598
            KRMPP+AVDLVS+LLQY+P
Sbjct: 336 HKRMPPEAVDLVSRLLQYSP 355

>pir||S51105 shaggy protein kinase 4 (EC 2.7.1.-) - garden petunia
           gi|619894|emb|CAA58594.1| Petunia Shaggy kinase 4
           [Petunia x hybrida]
          Length = 409

 Score =  353 bits (907), Expect = 8e-97
 Identities = 166/199 (83%), Positives = 185/199 (92%)
 Frame = +2

Query: 2   YLHLVLEFVPDTVYRISKHYAKNNQRMPNLFVKLYAYQMCRALNSIHKMGICHRDIKPQN 181
           YL+LVLE+VP+TVYR+ +HY+K NQ+MP ++VKLY YQ+ RAL  IH +G+CHRDIKPQN
Sbjct: 144 YLNLVLEYVPETVYRVLRHYSKANQQMPMIYVKLYTYQIFRALAYIHGIGVCHRDIKPQN 203

Query: 182 LLVNTETHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATDYTSAIDVWSVGCV 361
           LLVN  THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT+YT AID+WSVGCV
Sbjct: 204 LLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTFAIDIWSVGCV 263

Query: 362 LAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEINAMNPNYTEFKFPQIKAHPWTKVFS 541
           LAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI +MNPNYTEFKFPQIKAHPW K+F 
Sbjct: 264 LAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKSMNPNYTEFKFPQIKAHPWHKIFH 323

Query: 542 KRMPPDAVDLVSKLLQYAP 598
           KRMPP+AVDLVS+LLQY+P
Sbjct: 324 KRMPPEAVDLVSRLLQYSP 342

>gb|AAQ23108.1| shaggy-related protein kinase 3 [Physcomitrella patens]
           gi|33591218|gb|AAQ23113.1| shaggy-related protein kinase
           3 [Physcomitrella patens]
          Length = 423

 Score =  353 bits (906), Expect = 1e-96
 Identities = 167/200 (83%), Positives = 186/200 (92%), Gaps = 1/200 (0%)
 Frame = +2

Query: 2   YLHLVLEFVPDTVYRISKHYAKNNQRMPNLFVKLYAYQMCRALNSIHK-MGICHRDIKPQ 178
           YL+LVLE+VP+TVYRI+KHY + NQRMP ++VKLY YQ+CR+L  IH  +G+CHRDIKPQ
Sbjct: 157 YLNLVLEYVPETVYRIAKHYNRMNQRMPLVYVKLYTYQICRSLAYIHNGIGVCHRDIKPQ 216

Query: 179 NLLVNTETHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATDYTSAIDVWSVGC 358
           NLLVN  THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT+YT+AID+WS+GC
Sbjct: 217 NLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSMGC 276

Query: 359 VLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEINAMNPNYTEFKFPQIKAHPWTKVF 538
           V+AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI  MNPNYTEFKFPQIKAHPW KVF
Sbjct: 277 VMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVF 336

Query: 539 SKRMPPDAVDLVSKLLQYAP 598
            KRMPP+AVDLVS+LLQY+P
Sbjct: 337 HKRMPPEAVDLVSRLLQYSP 356

>gb|AAQ23110.1| shaggy-related protein kinase 5 [Physcomitrella patens]
          Length = 355

 Score =  352 bits (903), Expect = 2e-96
 Identities = 166/200 (83%), Positives = 185/200 (92%), Gaps = 1/200 (0%)
 Frame = +2

Query: 2   YLHLVLEFVPDTVYRISKHYAKNNQRMPNLFVKLYAYQMCRALNSIHK-MGICHRDIKPQ 178
           YL+LVLE+VP+TVYR++KHY + NQRMP L+VKLY YQ+CR+   IH  +G+CHRDIKPQ
Sbjct: 89  YLNLVLEYVPETVYRVAKHYNRMNQRMPLLYVKLYTYQICRSXAYIHSGIGVCHRDIKPQ 148

Query: 179 NLLVNTETHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATDYTSAIDVWSVGC 358
           NLLVN  THQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGAT+YT+AID+WS+GC
Sbjct: 149 NLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSMGC 208

Query: 359 VLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEINAMNPNYTEFKFPQIKAHPWTKVF 538
           V+AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI  MNPNYTEFKFPQIKAHPW KVF
Sbjct: 209 VMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVF 268

Query: 539 SKRMPPDAVDLVSKLLQYAP 598
            KRMPP+AVDLVS+LLQY+P
Sbjct: 269 HKRMPPEAVDLVSRLLQYSP 288



EST assemble image


clone accession position
1 MX240a07_r BP091500 1 499
2 HC077h02_r AV637813 78 511
3 CM084d03_r AV392622 212 605
4 CM039h01_r AV388963 212 576




Chlamydomonas reinhardtii
Kazusa DNA Research Institute