Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001340A_C01 KCC001340A_c01
(823 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ63695.1| NADH:ubiquinone oxidoreductase 24 kD subunit [Chl... 499 e-140
ref|NP_567244.1| predicted NADH dehydrogenase 24 kD subunit [Ara... 256 3e-67
sp|O22769|NUHM_ARATH NADH-ubiquinone oxidoreductase 24 kDa subun... 254 1e-66
emb|CAA32848.1| NADH dehydrogenase 24 kDa subunit (AA 6-217) [Bo... 224 2e-57
ref|NP_776990.1| NADH dehydrogenase flavoprotein 2 (24kD) [ubiqu... 224 2e-57
>gb|AAQ63695.1| NADH:ubiquinone oxidoreductase 24 kD subunit [Chlamydomonas
reinhardtii]
Length = 282
Score = 499 bits (1284), Expect = e-140
Identities = 249/249 (100%), Positives = 249/249 (100%)
Frame = +3
Query: 75 MLSRALLLAGRLAATGQQQAASTSSRAVQPLGSLLQRCNFATNSTDIFNIHKDTPENNAA 254
MLSRALLLAGRLAATGQQQAASTSSRAVQPLGSLLQRCNFATNSTDIFNIHKDTPENNAA
Sbjct: 1 MLSRALLLAGRLAATGQQQAASTSSRAVQPLGSLLQRCNFATNSTDIFNIHKDTPENNAA 60
Query: 255 TSFEFSEATLKVVNDIIARYPPNYKQSAIIPVLDVTQQENGGWLSLAAMNRVAKLLDMAP 434
TSFEFSEATLKVVNDIIARYPPNYKQSAIIPVLDVTQQENGGWLSLAAMNRVAKLLDMAP
Sbjct: 61 TSFEFSEATLKVVNDIIARYPPNYKQSAIIPVLDVTQQENGGWLSLAAMNRVAKLLDMAP 120
Query: 435 IRVYEVATFYTMFNRTKIGKYHVQICGTTPCRLQGSQKIEEAITKHLGIGIGQTTQDGLF 614
IRVYEVATFYTMFNRTKIGKYHVQICGTTPCRLQGSQKIEEAITKHLGIGIGQTTQDGLF
Sbjct: 121 IRVYEVATFYTMFNRTKIGKYHVQICGTTPCRLQGSQKIEEAITKHLGIGIGQTTQDGLF 180
Query: 615 TLGEMECMGACVNAPMVAIADYTKGVSGFEYIYYEDLTPKDIVNILDTIKKGGKPKPGSQ 794
TLGEMECMGACVNAPMVAIADYTKGVSGFEYIYYEDLTPKDIVNILDTIKKGGKPKPGSQ
Sbjct: 181 TLGEMECMGACVNAPMVAIADYTKGVSGFEYIYYEDLTPKDIVNILDTIKKGGKPKPGSQ 240
Query: 795 YRLKAEPAG 821
YRLKAEPAG
Sbjct: 241 YRLKAEPAG 249
>ref|NP_567244.1| predicted NADH dehydrogenase 24 kD subunit [Arabidopsis thaliana]
gi|15450451|gb|AAK96519.1| AT4g02580/T10P11_14
[Arabidopsis thaliana] gi|24797038|gb|AAN64531.1|
At4g02580/T10P11_14 [Arabidopsis thaliana]
Length = 255
Score = 256 bits (654), Expect = 3e-67
Identities = 114/203 (56%), Positives = 157/203 (77%), Gaps = 2/203 (0%)
Frame = +3
Query: 219 NIHKDTPENNAATSFEFSEATLKVVNDIIARYPPNYKQSAIIPVLDVTQQENGGWLSLAA 398
N H D+P+N +EFSEA V +I++ YP NYKQSA+IP+LD+ QQ+NGGWL ++A
Sbjct: 33 NYHLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLAQQQNGGWLPVSA 92
Query: 399 MNRVAKLLDMAPIRVYEVATFYTMFNRTKIGKYHVQICGTTPCRLQGSQKIEEAITKHLG 578
MN VAK++++APIRVYEVATFY+MFNR K+GKYH+ +CGTTPC ++GS+ IE A+ HLG
Sbjct: 93 MNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSRDIESALLDHLG 152
Query: 579 IGIGQTTQDGLFTLGEMECMGACVNAPMVAIADYTKGVSGFEYIYYEDLTPKDIVNILDT 758
+ G+ T+DGLF++GEMECMG CVNAPM+ +ADY+ G G+ Y Y+ED+TP+ +V I++
Sbjct: 153 VKRGEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYFEDVTPEKVVEIVEK 212
Query: 759 IKKGGKPKPGSQ--YRLKAEPAG 821
++KG KP G+Q R+K P G
Sbjct: 213 LRKGEKPPHGTQNPKRIKCGPEG 235
>sp|O22769|NUHM_ARATH NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial
precursor gi|7427765|pir||T01091 NADH2 dehydrogenase
(ubiquinone) (EC 1.6.5.3) 24K chain homolog -
Arabidopsis thaliana gi|3892051|gb|AAC78260.1|AAC78260
predicted NADH dehydrogenase 24 kD subunit [Arabidopsis
thaliana] gi|7269018|emb|CAB80751.1| predicted NADH
dehydrogenase 24 kD subunit [Arabidopsis thaliana]
Length = 244
Score = 254 bits (649), Expect = 1e-66
Identities = 113/201 (56%), Positives = 156/201 (77%), Gaps = 2/201 (0%)
Frame = +3
Query: 225 HKDTPENNAATSFEFSEATLKVVNDIIARYPPNYKQSAIIPVLDVTQQENGGWLSLAAMN 404
H D+P+N +EFSEA V +I++ YP NYKQSA+IP+LD+ QQ+NGGWL ++AMN
Sbjct: 24 HLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLAQQQNGGWLPVSAMN 83
Query: 405 RVAKLLDMAPIRVYEVATFYTMFNRTKIGKYHVQICGTTPCRLQGSQKIEEAITKHLGIG 584
VAK++++APIRVYEVATFY+MFNR K+GKYH+ +CGTTPC ++GS+ IE A+ HLG+
Sbjct: 84 AVAKVIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSRDIESALLDHLGVK 143
Query: 585 IGQTTQDGLFTLGEMECMGACVNAPMVAIADYTKGVSGFEYIYYEDLTPKDIVNILDTIK 764
G+ T+DGLF++GEMECMG CVNAPM+ +ADY+ G G+ Y Y+ED+TP+ +V I++ ++
Sbjct: 144 RGEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYFEDVTPEKVVEIVEKLR 203
Query: 765 KGGKPKPGSQ--YRLKAEPAG 821
KG KP G+Q R+K P G
Sbjct: 204 KGEKPPHGTQNPKRIKCGPEG 224
>emb|CAA32848.1| NADH dehydrogenase 24 kDa subunit (AA 6-217) [Bos taurus]
Length = 212
Score = 224 bits (570), Expect = 2e-57
Identities = 110/201 (54%), Positives = 142/201 (69%), Gaps = 1/201 (0%)
Frame = +3
Query: 222 IHKDTPENNAATSFEFSEATLKVVNDIIARYPPNYKQSAIIPVLDVTQQENGGWLSLAAM 401
+H+DTPENN T F+F+ K + I+ YP +K +A++PVLD+ Q++NG WL ++AM
Sbjct: 3 VHRDTPENNPETPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAM 61
Query: 402 NRVAKLLDMAPIRVYEVATFYTMFNRTKIGKYHVQICGTTPCRLQGSQKIEEAITKHLGI 581
N+VA++L + P+RVYEVATFYTM+NR +GKYH+Q+C TTPC L+ S I EAI K LGI
Sbjct: 62 NKVAEILQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGI 121
Query: 582 GIGQTTQDGLFTLGEMECMGACVNAPMVAIADYTKGVSGFEYIYYEDLTPKDIVNILDTI 761
+G+TT D LFTL E+EC+GACVNAPMV I D YYEDLTPKDI I+D +
Sbjct: 122 KVGETTPDKLFTLIEVECLGACVNAPMVQINDN----------YYEDLTPKDIEEIIDEL 171
Query: 762 KKGGKPKPGSQY-RLKAEPAG 821
K G PKPG + R EPAG
Sbjct: 172 KAGKIPKPGPRSGRFSCEPAG 192
>ref|NP_776990.1| NADH dehydrogenase flavoprotein 2 (24kD) [ubiquinone]
[NADH-ubiquinone reductase 24 kDa mitochondrial] [Bos
taurus] gi|128865|sp|P04394|NUHM_BOVIN NADH-ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial precursor
(Polypeptide II) gi|89673|pir||B30113 NADH2
dehydrogenase (ubiquinone) (EC 1.6.5.3) 24K chain
precursor - bovine gi|163399|gb|AAA87358.1|
NADH-ubiquinone reductase 24 kDa subunit [Bos taurus]
Length = 249
Score = 224 bits (570), Expect = 2e-57
Identities = 110/201 (54%), Positives = 142/201 (69%), Gaps = 1/201 (0%)
Frame = +3
Query: 222 IHKDTPENNAATSFEFSEATLKVVNDIIARYPPNYKQSAIIPVLDVTQQENGGWLSLAAM 401
+H+DTPENN T F+F+ K + I+ YP +K +A++PVLD+ Q++NG WL ++AM
Sbjct: 40 VHRDTPENNPETPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAM 98
Query: 402 NRVAKLLDMAPIRVYEVATFYTMFNRTKIGKYHVQICGTTPCRLQGSQKIEEAITKHLGI 581
N+VA++L + P+RVYEVATFYTM+NR +GKYH+Q+C TTPC L+ S I EAI K LGI
Sbjct: 99 NKVAEILQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGI 158
Query: 582 GIGQTTQDGLFTLGEMECMGACVNAPMVAIADYTKGVSGFEYIYYEDLTPKDIVNILDTI 761
+G+TT D LFTL E+EC+GACVNAPMV I D YYEDLTPKDI I+D +
Sbjct: 159 KVGETTPDKLFTLIEVECLGACVNAPMVQINDN----------YYEDLTPKDIEEIIDEL 208
Query: 762 KKGGKPKPGSQY-RLKAEPAG 821
K G PKPG + R EPAG
Sbjct: 209 KAGKIPKPGPRSGRFSCEPAG 229
