Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001339A_C01 KCC001339A_c01
(869 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P16149|RS16_LUPPO 40S RIBOSOMAL PROTEIN S16 gi|70921|pir||R3Y... 98 5e-35
ref|NP_704416.1| 40S ribosomal protein S16, putative [Plasmodium... 92 2e-33
sp|P46293|RS16_GOSHI 40S RIBOSOMAL PROTEIN S16 gi|541835|pir||S4... 91 2e-32
ref|NP_038675.1| ribosomal protein S16; EST AI317031 [Mus muscul... 94 3e-32
ref|NP_001011.1| ribosomal protein S16; 40S ribosomal protein S1... 94 4e-32
>sp|P16149|RS16_LUPPO 40S RIBOSOMAL PROTEIN S16 gi|70921|pir||R3YL16 ribosomal protein
S16, cytosolic - large-leaved lupine
gi|19512|emb|CAA36068.1| unnamed protein product
[Lupinus polyphyllus]
Length = 145
Score = 98.2 bits (243), Expect(2) = 5e-35
Identities = 54/104 (51%), Positives = 72/104 (68%)
Frame = +2
Query: 32 SRCRLSAARRPPSRWPTGKQGSGLIKLNGQPLGAGEARGSGASRCLSPSW*LACAKVKNL 211
++ +SAAR+P S PT +GLIK+NG P+ E + P L ++ +
Sbjct: 8 NKSNVSAARKPLSPSPTAS-AAGLIKINGSPIELVEPEIL-RFKAFEPILLLGKSRFAGV 65
Query: 212 DIRLRVKGGGHVSQIYALRQAIAKAVVAFYQKYVDEQSKQQIKD 343
D+R+RVKGGGH SQIYA+RQ+IAKA+VAFYQKYVDEQSK++IKD
Sbjct: 66 DMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKD 109
Score = 72.8 bits (177), Expect(2) = 5e-35
Identities = 32/38 (84%), Positives = 37/38 (97%)
Frame = +3
Query: 339 RTLLLQFDRTLLVADPRRCEPKKFGGRGARARFQKSYR 452
+ +L+++DRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 108 KDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145
>ref|NP_704416.1| 40S ribosomal protein S16, putative [Plasmodium falciparum 3D7]
gi|23499155|emb|CAD51235.1| 40S ribosomal protein S16,
putative [Plasmodium falciparum 3D7]
Length = 144
Score = 92.0 bits (227), Expect(3) = 2e-33
Identities = 46/88 (52%), Positives = 61/88 (69%)
Frame = +2
Query: 80 TGKQGSGLIKLNGQPLGAGEARGSGASRCLSPSW*LACAKVKNLDIRLRVKGGGHVSQIY 259
T G GLIKLNG+ L E ++ P W + K+KNLDIR+RVKGGG SQIY
Sbjct: 22 TVTNGKGLIKLNGKNLDLVEPYIL-KTKVYEPLWLIGSGKLKNLDIRIRVKGGGQTSQIY 80
Query: 260 ALRQAIAKAVVAFYQKYVDEQSKQQIKD 343
A+RQAI K ++++YQKYVDE +K+++KD
Sbjct: 81 AIRQAIGKGIISYYQKYVDESTKKELKD 108
Score = 65.1 bits (157), Expect(3) = 2e-33
Identities = 28/38 (73%), Positives = 35/38 (91%)
Frame = +3
Query: 339 RTLLLQFDRTLLVADPRRCEPKKFGGRGARARFQKSYR 452
+ +LL++DR+LLV D RRCEPKKFGG+GARAR+QKSYR
Sbjct: 107 KDVLLRYDRSLLVGDTRRCEPKKFGGKGARARYQKSYR 144
Score = 28.9 bits (63), Expect(3) = 2e-33
Identities = 13/14 (92%), Positives = 14/14 (99%)
Frame = +1
Query: 37 VQTFGRKKTAVAVA 78
VQTFG+KKTAVAVA
Sbjct: 8 VQTFGKKKTAVAVA 21
>sp|P46293|RS16_GOSHI 40S RIBOSOMAL PROTEIN S16 gi|541835|pir||S41193 ribosomal protein
S16 protein - upland cotton gi|439654|emb|CAA53567.1|
RS16 protein, 40S subunit [Gossypium hirsutum]
Length = 145
Score = 90.9 bits (224), Expect(2) = 2e-32
Identities = 48/86 (55%), Positives = 62/86 (71%)
Frame = +2
Query: 86 KQGSGLIKLNGQPLGAGEARGSGASRCLSPSW*LACAKVKNLDIRLRVKGGGHVSQIYAL 265
K+G GLIK+NG P+ E + + P L + +D+R+RVKGGGH SQIYA+
Sbjct: 25 KRGRGLIKINGCPIELVEPEIL-RFKAVEPILLLGRQRFTGVDMRIRVKGGGHTSQIYAI 83
Query: 266 RQAIAKAVVAFYQKYVDEQSKQQIKD 343
RQ+IAKA+VAFYQKYVDEQSK++IKD
Sbjct: 84 RQSIAKALVAFYQKYVDEQSKKEIKD 109
Score = 71.6 bits (174), Expect(2) = 2e-32
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +3
Query: 339 RTLLLQFDRTLLVADPRRCEPKKFGGRGARARFQKSYR 452
+ +L+ +DRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 108 KDILVGYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145
Score = 39.3 bits (90), Expect = 0.086
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = +1
Query: 31 QSVQTFGRKKTAVAVAYWQAGQRPH*AEWPAPGSW*SPRLWRFKVFEPILVIG 189
+SVQ FGRKKTAVAV + + G R P P + RFK EPIL++G
Sbjct: 7 ESVQCFGRKKTAVAVTHCKRG-RGLIKINGCPIELVEPEILRFKAVEPILLLG 58
>ref|NP_038675.1| ribosomal protein S16; EST AI317031 [Mus musculus]
gi|133810|sp|P14131|RS16_MOUSE 40S RIBOSOMAL PROTEIN S16
gi|200796|gb|AAA03646.1| 16S ribosomal protein
Length = 145
Score = 94.0 bits (232), Expect(2) = 3e-32
Identities = 49/86 (56%), Positives = 65/86 (74%)
Frame = +2
Query: 86 KQGSGLIKLNGQPLGAGEARGSGASRCLSPSW*LACAKVKNLDIRLRVKGGGHVSQIYAL 265
K+G+GLIK+NG+PL E R + L P L + +DIR+RVKGGGHV+QIYA+
Sbjct: 25 KRGNGLIKVNGRPLEMIEPRAL-QYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAI 83
Query: 266 RQAIAKAVVAFYQKYVDEQSKQQIKD 343
RQ+I+KA+VA+YQKYVDE SK++IKD
Sbjct: 84 RQSISKALVAYYQKYVDEASKKEIKD 109
Score = 67.8 bits (164), Expect(2) = 3e-32
Identities = 30/38 (78%), Positives = 35/38 (91%)
Frame = +3
Query: 339 RTLLLQFDRTLLVADPRRCEPKKFGGRGARARFQKSYR 452
+ +L+Q+DRTLLVADPRRCE KKFGG GARAR+QKSYR
Sbjct: 108 KDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 145
Score = 33.5 bits (75), Expect = 4.7
Identities = 22/53 (41%), Positives = 31/53 (57%)
Frame = +1
Query: 31 QSVQTFGRKKTAVAVAYWQAGQRPH*AEWPAPGSW*SPRLWRFKVFEPILVIG 189
QSVQ FGRKKT +AVA+ + G P PR ++K+ EP+L++G
Sbjct: 8 QSVQVFGRKKT-LAVAHCKRGNGLIKVN-GRPLEMIEPRALQYKLLEPVLLLG 58
>ref|NP_001011.1| ribosomal protein S16; 40S ribosomal protein S16 [Homo sapiens]
gi|28477868|ref|XP_284279.1| ribosomal protein S16 [Mus
musculus] gi|28482697|ref|XP_289707.1| similar to
ribosomal protein S16, cytosolic [validated] - rat [Mus
musculus] gi|28548365|ref|XP_282782.1| similar to
ribosomal protein S16, cytosolic [validated] - rat [Mus
musculus] gi|34855415|ref|XP_341816.1| similar to 40S
ribosomal protein S16 [Rattus norvegicus]
gi|133807|sp|P17008|RS16_HUMAN 40S ribosomal protein S16
gi|70918|pir||R3HU16 ribosomal protein S16, cytosolic
[validated] - human gi|70919|pir||R3RT16 ribosomal
protein S16, cytosolic [validated] - rat
gi|57714|emb|CAA35662.1| unnamed protein product [Rattus
rattus] gi|338447|gb|AAA60583.1| RPS16
gi|12846181|dbj|BAB27062.1| unnamed protein product [Mus
musculus] gi|12846230|dbj|BAB27083.1| unnamed protein
product [Mus musculus] gi|12846934|dbj|BAB27368.1|
unnamed protein product [Mus musculus]
gi|12859587|dbj|BAB31702.1| unnamed protein product [Mus
musculus] gi|13279236|gb|AAH04324.1| Ribosomal protein
S16 [Homo sapiens] gi|14044116|gb|AAH07977.1| RPS16
protein [Homo sapiens] gi|17932976|dbj|BAB79479.1|
ribosomal protein S16 [Homo sapiens]
gi|26350881|dbj|BAC39077.1| unnamed protein product [Mus
musculus] gi|26353422|dbj|BAC40341.1| unnamed protein
product [Mus musculus] gi|26353788|dbj|BAC40524.1|
unnamed protein product [Mus musculus]
Length = 146
Score = 93.6 bits (231), Expect(2) = 4e-32
Identities = 49/86 (56%), Positives = 66/86 (75%)
Frame = +2
Query: 86 KQGSGLIKLNGQPLGAGEARGSGASRCLSPSW*LACAKVKNLDIRLRVKGGGHVSQIYAL 265
K+G+GLIK+NG+PL E R + + L P L + +DIR+RVKGGGHV+QIYA+
Sbjct: 26 KRGNGLIKVNGRPLEMIEPR-TLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAI 84
Query: 266 RQAIAKAVVAFYQKYVDEQSKQQIKD 343
RQ+I+KA+VA+YQKYVDE SK++IKD
Sbjct: 85 RQSISKALVAYYQKYVDEASKKEIKD 110
Score = 67.8 bits (164), Expect(2) = 4e-32
Identities = 30/38 (78%), Positives = 35/38 (91%)
Frame = +3
Query: 339 RTLLLQFDRTLLVADPRRCEPKKFGGRGARARFQKSYR 452
+ +L+Q+DRTLLVADPRRCE KKFGG GARAR+QKSYR
Sbjct: 109 KDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
Score = 39.3 bits (90), Expect = 0.086
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +1
Query: 31 QSVQTFGRKKTAVAVAYWQAGQRPH*AEWPAPGSW*SPRLWRFKVFEPILVIG 189
QSVQ FGRKKTA AVA+ + G P PR ++K+ EP+L++G
Sbjct: 8 QSVQVFGRKKTATAVAHCKRGNGLIKVN-GRPLEMIEPRTLQYKLLEPVLLLG 59
