Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001332A_C01 KCC001332A_c01
(545 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE05483.1| OSJNBa0022H21.3 [Oryza sativa (japonica cultivar... 47 1e-04
ref|ZP_00028862.1| COG0642: Signal transduction histidine kinase... 44 0.001
ref|NP_064121.1| pr5 [Rat cytomegalovirus] gi|9800242|gb|AAF9911... 42 0.004
ref|ZP_00090197.1| COG0614: ABC-type Fe3+-hydroxamate transport ... 42 0.004
ref|ZP_00049948.1| COG1530: Ribonucleases G and E [Magnetospiril... 42 0.005
>emb|CAE05483.1| OSJNBa0022H21.3 [Oryza sativa (japonica cultivar-group)]
Length = 686
Score = 47.4 bits (111), Expect = 1e-04
Identities = 50/152 (32%), Positives = 60/152 (38%)
Frame = +2
Query: 20 QRRRITTPYRGYLLECGAPGGRGRDRRLLLPGQLQRPELRAGRAPLHEPQARPAHQRQEL 199
+RRR + P RG GA GG R G + PELRAG H A QR+
Sbjct: 250 ERRRRSLPGRGD----GASGGGSAARN---GGGVAGPELRAGSGRQHGAGAAARAQRRRA 302
Query: 200 RNLRPQAQASRQLPEARRHGAAAGRQCGAT*RAAEC*PLRGGRWHRADAWHSGHADRLSA 379
A+R + HGAA+ R G A LR G W W + +
Sbjct: 303 --------AARLCGREQPHGAASPRLPGCRRDA-----LRPGGWRGVARWGAAAGQQ--- 346
Query: 380 RGRQDRRGLSTVGSSPGRPGSRLLAQHGGGRS 475
GR+ RRG S G G GS A GG S
Sbjct: 347 -GRRSRRGSSFTGVGVGLEGSAKGAGSGGSSS 377
>ref|ZP_00028862.1| COG0642: Signal transduction histidine kinase [Burkholderia
fungorum]
Length = 727
Score = 43.9 bits (102), Expect = 0.001
Identities = 51/182 (28%), Positives = 71/182 (38%), Gaps = 11/182 (6%)
Frame = +2
Query: 8 RDGLQRRRI--------TTPYRGYLLECGAPGGRGRDRRLLLPGQLQRPEL---RAGRAP 154
RD + RR+ T G C P R R G+L R + R G A
Sbjct: 90 RDAARHRRLGNHACAAGTARSAGDFPYCARPRQRPYSRSRTRRGRLSRQAVFIYRTGAAH 149
Query: 155 LHEPQARPAHQRQELRNLRPQAQASRQLPEARRHGAAAGRQCGAT*RAAEC*PLRGGRWH 334
H +R + + +RN RPQA+ +ARR G +A +Q +A P RG H
Sbjct: 150 PHAVASRRDPRERRIRNRRPQARRIAPQGDARRRGNSAHQQGVHAVASAGAPPGRGALAH 209
Query: 335 RADAWHSGHADRLSARGRQDRRGLSTVGSSPGRPGSRLLAQHGGGRSERFVRRGVPQLQR 514
GH L R ++ RG T + GR R A G + +RR + +
Sbjct: 210 ADRLRSVGH--ELRQRHQRGGRGHQT-AARQGRSSVREEADPYGAQHRLHLRRRLMKFWT 266
Query: 515 GR 520
GR
Sbjct: 267 GR 268
>ref|NP_064121.1| pr5 [Rat cytomegalovirus] gi|9800242|gb|AAF99116.1|AF232689_7 pr5
[rat cytomegalovirus Maastricht]
Length = 629
Score = 42.4 bits (98), Expect = 0.004
Identities = 55/176 (31%), Positives = 72/176 (40%), Gaps = 12/176 (6%)
Frame = +1
Query: 22 APPHHNSLPRLPARMWCAWWTRTRPSAPVAWSASTAGTSCW------PRATA*TPSPASA 183
APP + PR A A T S P W TA SCW P +TA T + +
Sbjct: 404 APPRRPAGPR-GASSSTAPGTGRSASPPACW---TATASCWTSPSSGPTSTA-TRTRTAG 458
Query: 184 STSRASQSAATGSGISPASRSTTSRCCCWTTVRSYLTCCGMLT--PSRWTVA*G*-CLA* 354
T RA+ AAT G + +SR+T+ C + S G P+ W + C
Sbjct: 459 GTGRAT--AATSDGTAASSRTTSPARPCGSPATSRAPASGGSARGPTTWPASTAASCTTR 516
Query: 355 RSR*S---AFRSRQTRPSWAFNSRVFPWSPRVSSAGSAWRRTKRTVRTQGRSPTAA 513
RS + A R R S PWSP GSA T R +R G SP+++
Sbjct: 517 RSSSTCRGAARPRDGSSPTPARSGRCPWSPPWPRPGSAAASTGRGIR--GSSPSSS 570
>ref|ZP_00090197.1| COG0614: ABC-type Fe3+-hydroxamate transport system, periplasmic
component [Azotobacter vinelandii]
Length = 621
Score = 42.4 bits (98), Expect = 0.004
Identities = 56/182 (30%), Positives = 67/182 (36%), Gaps = 27/182 (14%)
Frame = +2
Query: 2 GSRDGLQRRRITTPYRGYLLECGAPGGRGR------------------DRRLLLPGQLQR 127
G GL R P R + + G PG +G DRRL G R
Sbjct: 96 GPEPGLVPHRGRQPERRHRHQRGHPGWQGHSQGLGILRHRPPDRAADPDRRLHQAGCAHR 155
Query: 128 PELRAGRAPLHEPQARPAHQRQELRNLRPQA--QASRQLPEARRH---GAAAGRQCGAT* 292
P LR +P R Q +R +RP Q R P+ RRH G+A GR A
Sbjct: 156 PRLRQRG---QDPAGRAGKHGQAVRRIRPARLHQPFRADPDRRRHLHRGSALGRLQHALR 212
Query: 293 RAAEC*PLRGGRWHRADAWHSGHADRLSARGRQ-DRRGL---STVGSSPGRPGSRLLAQH 460
P+ GR H G L+ Q DR+GL PGR RL QH
Sbjct: 213 PLGH--PV--GRRPALPRPHPGQGHHLAPERLQPDRQGLLDDPLRHPLPGRAAHRLAVQH 268
Query: 461 GG 466
GG
Sbjct: 269 GG 270
>ref|ZP_00049948.1| COG1530: Ribonucleases G and E [Magnetospirillum magnetotacticum]
Length = 462
Score = 42.0 bits (97), Expect = 0.005
Identities = 52/173 (30%), Positives = 68/173 (39%)
Frame = +2
Query: 2 GSRDGLQRRRITTPYRGYLLECGAPGGRGRDRRLLLPGQLQRPELRAGRAPLHEPQARPA 181
G+ DG RR RG + G GGRGR RR + ++PE + R EP R
Sbjct: 138 GTHDGAGRRGA----RGGI-GAGGRGGRGRPRRHEEQRRGEQPE-QDERRDAREP--RVE 189
Query: 182 HQRQELRNLRPQAQASRQLPEARRHGAAAGRQCGAT*RAAEC*PLRGGRWHRADAWHSGH 361
H+ ++ R RP + + + E RR GR R P R R D H
Sbjct: 190 HEGEDERERRPGRERAPRHDERRR--PEPGRPTEEGRRG----PRRAQREPGRDEQDDEH 243
Query: 362 ADRLSARGRQDRRGLSTVGSSPGRPGSRLLAQHGGGRSERFVRRGVPQLQRGR 520
+ R + RR PG R LA+ GG+ RRGV R R
Sbjct: 244 GEEADERAVEQRRA--------DGPGRRALARQPGGQDAHAERRGVAHGARPR 288
