Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001316A_C01 KCC001316A_c01
(558 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ55459.1| putative NADH:ubiquinone oxidoreductase 17.8 kDa ... 317 5e-86
ref|XP_311129.1| ENSANGP00000004749 [Anopheles gambiae] gi|30178... 47 2e-04
dbj|BAC57776.1| OSJNBb0075O18.3 [Oryza sativa (japonica cultivar... 44 0.001
ref|NP_823727.1| putative translation initiation factor IF-2 [St... 44 0.001
ref|NP_001476.1| gastrulation brain homeo box 2 [Homo sapiens] g... 44 0.002
>gb|AAQ55459.1| putative NADH:ubiquinone oxidoreductase 17.8 kDa subunit precursor
[Chlamydomonas reinhardtii]
Length = 155
Score = 317 bits (813), Expect = 5e-86
Identities = 155/155 (100%), Positives = 155/155 (100%)
Frame = +1
Query: 70 MSASVEERQSFHDKVNDVFKNLTGEAGKRWARPDEPILHTLNDEKEEPHIFFHNTNYRTS 249
MSASVEERQSFHDKVNDVFKNLTGEAGKRWARPDEPILHTLNDEKEEPHIFFHNTNYRTS
Sbjct: 1 MSASVEERQSFHDKVNDVFKNLTGEAGKRWARPDEPILHTLNDEKEEPHIFFHNTNYRTS 60
Query: 250 RKYINVEKTKILREQALECVRAAGTARYHKCTEVMKRLQAAVRVASNVDRGPLARKRDVG 429
RKYINVEKTKILREQALECVRAAGTARYHKCTEVMKRLQAAVRVASNVDRGPLARKRDVG
Sbjct: 61 RKYINVEKTKILREQALECVRAAGTARYHKCTEVMKRLQAAVRVASNVDRGPLARKRDVG 120
Query: 430 FIYHNNRLRELQQQAAELEIENPFPAPAKQATGGY 534
FIYHNNRLRELQQQAAELEIENPFPAPAKQATGGY
Sbjct: 121 FIYHNNRLRELQQQAAELEIENPFPAPAKQATGGY 155
>ref|XP_311129.1| ENSANGP00000004749 [Anopheles gambiae] gi|30178092|gb|EAA06612.2|
ENSANGP00000004749 [Anopheles gambiae str. PEST]
Length = 633
Score = 47.0 bits (110), Expect = 2e-04
Identities = 39/118 (33%), Positives = 50/118 (42%), Gaps = 4/118 (3%)
Frame = -3
Query: 484 PAPPPAAAARAACCCGR*SPRRACGPAGRGPRWRPPGRQPAGAS*PRCTCGTAQCPQHAR 305
PA P + AA C S R G GR P PP +PAG P C TA+ P R
Sbjct: 516 PASPCTPSPCAAACPTSPSAARPSGCPGRSPPSAPPAARPAG---PPAAC-TARAPP-GR 570
Query: 304 TPEPAPSESSSSPR*CTSARS----GSWCCGRKYAAPPSHRSACAEWARRGGPTFSQP 143
+ PS SS+ P + S + C R A+P + RS+ A R P + P
Sbjct: 571 SRSAPPSRSSAGPAVASGCGSPPDCSASCAARPPASPAAPRSSAPPGASRPAPRPAAP 628
Score = 33.9 bits (76), Expect = 1.5
Identities = 42/137 (30%), Positives = 52/137 (37%), Gaps = 18/137 (13%)
Frame = -3
Query: 484 PAPPPAAAARAACCCGR*SPRRACGPAG-----RGPRWRPPGRQPAG-------AS*PRC 341
PAPPPA A P RA + R P RPP Q AG A+
Sbjct: 450 PAPPPAPIAFTTTLLPIAWPTRAARASPPALPFRAPA-RPPSAQAAGPGVVAAAAAAAAA 508
Query: 340 TCGTAQCPQHARTPEPAPSESSSSPR*CTSARSGSWCCGRK-YAAPPSHR-----SACAE 179
A P TP P + +SP SA S C GR +APP+ R +AC
Sbjct: 509 PAAVAVRPASPCTPSPCAAACPTSP----SAARPSGCPGRSPPSAPPAARPAGPPAACTA 564
Query: 178 WARRGGPTFSQPPQSGS 128
A G + P +S +
Sbjct: 565 RAPPGRSRSAPPSRSSA 581
>dbj|BAC57776.1| OSJNBb0075O18.3 [Oryza sativa (japonica cultivar-group)]
Length = 440
Score = 44.3 bits (103), Expect = 0.001
Identities = 56/188 (29%), Positives = 74/188 (38%), Gaps = 15/188 (7%)
Frame = +3
Query: 39 QAALGAHLGKNVSQR*GASKLPR*GQ*CFQEPDWGGW-EKVGPPRRAHSAHAER*EGGAA 215
++A A L + +R A +LP G+ +E GW E+ G P +R GGA
Sbjct: 2 ESAQWAPLRRRCLRRCRAQRLPGAGRRAGEEGSSAGWEEEAGAPAARAGWRGKRRHGGAR 61
Query: 216 YFLPQHQLPDL-AEVHQRGEDEDSEGAGSGVRACCGHCAVPQVHRGHEAPAGCRPGGLQ- 389
+ + D+ A V R + E A G G P+ R H A R G Q
Sbjct: 62 CGGFRRSVRDVTAGVRARWRGGEEEVAVLGAEEVVGVAFYPERRRVHRA-VTARRGRAQR 120
Query: 390 -RGPRPAGPQARRGLHLPQQQAARAAAA-----------GGGAGDREPLPRARQAGNWRL 533
RG RP G G P AR A GGG G R R R+ G R
Sbjct: 121 ARGRRPRGGSLVAGDARPDAAMARIEAVIATKVVVAPLLGGGRGGRRRCLRGRR-GRARQ 179
Query: 534 LKRERSVA 557
L+++RS A
Sbjct: 180 LQQQRSSA 187
>ref|NP_823727.1| putative translation initiation factor IF-2 [Streptomyces
avermitilis MA-4680] gi|29606199|dbj|BAC70262.1|
putative translation initiation factor IF-2
[Streptomyces avermitilis MA-4680]
Length = 1046
Score = 43.9 bits (102), Expect = 0.001
Identities = 37/97 (38%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = -3
Query: 520 PAWRARGRGSRSPAPPPAAAARAACCCGR*SPRRACGPAGRGPRWRPPGRQPAGAS*PRC 341
PA AR R PAP PAAA R A + R A PA GPR PG +PA P
Sbjct: 73 PAQAARPAAPRPPAPKPAAAERPAA-----AERPAAAPAAPGPR---PGPKPAPRPAPAA 124
Query: 340 TCGTAQCPQHARTPE--PAPSESSSSPR*CTSARSGS 236
A P+ P AP+ ++S PR AR G+
Sbjct: 125 PAPAA--PEFTAPPSAPAAPAAAASGPR--PGARPGA 157
>ref|NP_001476.1| gastrulation brain homeo box 2 [Homo sapiens]
gi|2896814|gb|AAC03241.1| homeobox protein [Homo
sapiens] gi|1588288|prf||2208304A homeobox protein
Length = 347
Score = 43.5 bits (101), Expect = 0.002
Identities = 41/141 (29%), Positives = 52/141 (36%), Gaps = 3/141 (2%)
Frame = -3
Query: 484 PAPPPA---AAARAACCCGR*SPRRACGPAGRGPRWRPPGRQPAGAS*PRCTCGTAQCPQ 314
P PPPA AA + AC + R P P WR R P S PR + + P
Sbjct: 59 PPPPPALPQAALQPACRPHTLTTRSPACPQASAPAWRRAWRSPL-RSWPRSPAASPRRPS 117
Query: 313 HARTPEPAPSESSSSPR*CTSARSGSWCCGRKYAAPPSHRSACAEWARRGGPTFSQPPQS 134
R PA S S P TS R+ + R+A A W +R + S P+
Sbjct: 118 TRRRQRPASSRRSRCPAAVTST--------RRRRCRLTRRTAKASWPKRARCSPSPRPRR 169
Query: 133 GS*KHH*PYRGSFDAPQRWLT 71
+ G QRW T
Sbjct: 170 CRLRSSGLSEGKGKTSQRWKT 190
