Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001315A_C02 KCC001315A_c02
(1131 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T08175 chlorophyll a/b-binding protein homolog LI818r-1 pre... 271 e-105
pir||T08137 chlorophyll a/b-binding protein homolog LI818r-1 - C... 249 e-101
sp|Q03965|L181_CHLEU Chlorophyll A-B binding protein L1818, chlo... 204 2e-72
emb|CAA04403.1| fucoxanthin chlorophyll a/c binding protein [Cyc... 124 4e-40
emb|CAA04404.1| fucoxanthin chlorophyll a/c binding protein [Cyc... 124 5e-40
>pir||T08175 chlorophyll a/b-binding protein homolog LI818r-1 precursor -
Chlamydomonas reinhardtii gi|1865773|emb|CAA64632.1|
LI818r-1 [Chlamydomonas reinhardtii]
Length = 253
Score = 271 bits (693), Expect(2) = e-105
Identities = 128/136 (94%), Positives = 132/136 (96%)
Frame = +1
Query: 214 EDVFAYTKNLPGVTAPFEGVFDPAGFLATASIKDVRRWRESEITHGRVAMLAALGFVVGE 393
EDV AY K LPGVTAPF+ VFDPAGFLATAS+KDVRRWRESEITHGRVAMLAALGF+VGE
Sbjct: 40 EDVLAYAKTLPGVTAPFDNVFDPAGFLATASVKDVRRWRESEITHGRVAMLAALGFIVGE 99
Query: 394 QLQDFPLFFNWDGRVSGPAIYHFQQIGQGFWEPLLIAIGVAESYRVAVGWATPTGTGFNS 573
QLQDFPLFFN+DGRVSGPAIYHFQQIGQGFWEPLLIAIGVAESYRVAVGWATPTGTGFNS
Sbjct: 100 QLQDFPLFFNFDGRVSGPAIYHFQQIGQGFWEPLLIAIGVAESYRVAVGWATPTGTGFNS 159
Query: 574 LKDDYEPGDLGFDPLG 621
LKDDYEPGDLGFDPLG
Sbjct: 160 LKDDYEPGDLGFDPLG 175
Score = 134 bits (337), Expect(2) = e-105
Identities = 66/74 (89%), Positives = 70/74 (94%)
Frame = +2
Query: 614 PWGLKPTDPEELKVMQTKELNNGRLAMIAIAAFVAQELVEQTEIFEHLALRFEKEAILEL 793
P GLKPTDPEELK +QTKELNNGRLAMIAIAAFVAQELVEQTEIFEHL LRFEKE ILEL
Sbjct: 173 PLGLKPTDPEELKTLQTKELNNGRLAMIAIAAFVAQELVEQTEIFEHLVLRFEKEVILEL 232
Query: 794 DDIERDLGLPVTPL 835
+D+ERDLGLP+TPL
Sbjct: 233 EDVERDLGLPLTPL 246
>pir||T08137 chlorophyll a/b-binding protein homolog LI818r-1 - Chlamydomonas
reinhardtii (fragment) gi|1865771|emb|CAA64619.1|
LI818r-1 [Chlamydomonas reinhardtii]
Length = 196
Score = 249 bits (635), Expect(3) = e-101
Identities = 118/118 (100%), Positives = 118/118 (100%)
Frame = +1
Query: 268 GVFDPAGFLATASIKDVRRWRESEITHGRVAMLAALGFVVGEQLQDFPLFFNWDGRVSGP 447
GVFDPAGFLATASIKDVRRWRESEITHGRVAMLAALGFVVGEQLQDFPLFFNWDGRVSGP
Sbjct: 1 GVFDPAGFLATASIKDVRRWRESEITHGRVAMLAALGFVVGEQLQDFPLFFNWDGRVSGP 60
Query: 448 AIYHFQQIGQGFWEPLLIAIGVAESYRVAVGWATPTGTGFNSLKDDYEPGDLGFDPLG 621
AIYHFQQIGQGFWEPLLIAIGVAESYRVAVGWATPTGTGFNSLKDDYEPGDLGFDPLG
Sbjct: 61 AIYHFQQIGQGFWEPLLIAIGVAESYRVAVGWATPTGTGFNSLKDDYEPGDLGFDPLG 118
Score = 143 bits (360), Expect(3) = e-101
Identities = 73/74 (98%), Positives = 73/74 (98%)
Frame = +2
Query: 614 PWGLKPTDPEELKVMQTKELNNGRLAMIAIAAFVAQELVEQTEIFEHLALRFEKEAILEL 793
P GLKPTDPEELKVMQTKELNNGRLAMIAIAAFVAQELVEQTEIFEHLALRFEKEAILEL
Sbjct: 116 PLGLKPTDPEELKVMQTKELNNGRLAMIAIAAFVAQELVEQTEIFEHLALRFEKEAILEL 175
Query: 794 DDIERDLGLPVTPL 835
DDIERDLGLPVTPL
Sbjct: 176 DDIERDLGLPVTPL 189
Score = 22.3 bits (46), Expect(3) = e-101
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 822 PSPPCPDNLKSL 857
P P PDNLKSL
Sbjct: 185 PVTPLPDNLKSL 196
>sp|Q03965|L181_CHLEU Chlorophyll A-B binding protein L1818, chloroplast precursor
gi|99368|pir||S20520 chlorophyll a/b-binding protein
homolog LI818 - Chlamydomonas eugametos
gi|17982|emb|CAA43128.1| L1818 [Chlamydomonas eugametos]
Length = 270
Score = 204 bits (519), Expect(2) = 2e-72
Identities = 98/144 (68%), Positives = 117/144 (81%), Gaps = 3/144 (2%)
Frame = +1
Query: 217 DVFAYTKNLPGV---TAPFEGVFDPAGFLATASIKDVRRWRESEITHGRVAMLAALGFVV 387
+V AY LPG + PF+GV+DP ATA++ DVRRWRESEITHGRVAMLAALGFVV
Sbjct: 52 EVQAYLATLPGCGVESGPFKGVWDPLSLAATATVGDVRRWRESEITHGRVAMLAALGFVV 111
Query: 388 GEQLQDFPLFFNWDGRVSGPAIYHFQQIGQGFWEPLLIAIGVAESYRVAVGWATPTGTGF 567
GEQL+DFP FFN+DG ++G AI F Q+ QGFWEPLLIAIG+AESYRV++GWATPTGTGF
Sbjct: 112 GEQLEDFPAFFNFDGHITGQAIKQFDQVQQGFWEPLLIAIGLAESYRVSLGWATPTGTGF 171
Query: 568 NSLKDDYEPGDLGFDPLGPQAHRP 639
N+LKD+Y+ G+L FDPLG + P
Sbjct: 172 NNLKDEYDLGNLYFDPLGLKPEDP 195
Score = 92.4 bits (228), Expect(2) = 2e-72
Identities = 47/71 (66%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = +2
Query: 614 PWGLKPTDPEELKVMQTKELNNGRLAMIAIAAFVAQELVEQ-TEIFEHLALRFEKEAILE 790
P GLKP DPEEL+ +QTKELNNGRLAMIAIA FV QE+ E EIF+HL EK+ + E
Sbjct: 187 PLGLKPEDPEELRELQTKELNNGRLAMIAIAGFVLQEVAEPGVEIFQHLFFTIEKDIVEE 246
Query: 791 LDDIERDLGLP 823
+D IE+DLGLP
Sbjct: 247 IDIIEKDLGLP 257
>emb|CAA04403.1| fucoxanthin chlorophyll a/c binding protein [Cyclotella cryptica]
Length = 199
Score = 124 bits (311), Expect(2) = 4e-40
Identities = 64/138 (46%), Positives = 88/138 (63%), Gaps = 4/138 (2%)
Frame = +1
Query: 238 NLPGVTAPFEGVFDPAGFLATASIKDVRRWRESEITHGRVAMLAALGFVVGEQLQDFPLF 417
+LPG P G FDP GF A K ++R+RE+E+THGRVAMLA +GF+VGE ++
Sbjct: 25 DLPGALPPV-GFFDPLGFAEKADEKTLKRYREAEVTHGRVAMLAVIGFLVGEAVEGSSFL 83
Query: 418 FNWDGRVSGPAIYHFQQIGQGFWEPLLIA-IGVAESYRVAVGWATPTGTGFNS---LKDD 585
F D ++SGPAI HF Q+ G W+ L++ IG AE+ R +GW P ++ L+D+
Sbjct: 84 F--DAQISGPAITHFTQVPDG-WDALIVTFIGAAEAQRAQIGWVDPADASYDQPGLLRDN 140
Query: 586 YEPGDLGFDPLGPQAHRP 639
Y PGD+GFDPLG + P
Sbjct: 141 YYPGDIGFDPLGLKPEDP 158
Score = 64.3 bits (155), Expect(2) = 4e-40
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = +2
Query: 614 PWGLKPTDPEELKVMQTKELNNGRLAMIAIAAFVAQELVEQTEIFEHLA 760
P GLKP DPEEL +M TKEL NGRLAM+A A F+AQE V+ I EH +
Sbjct: 150 PLGLKPEDPEELNIMITKELQNGRLAMLAAAGFLAQEAVDGKGILEHFS 198
>emb|CAA04404.1| fucoxanthin chlorophyll a/c binding protein [Cyclotella cryptica]
Length = 210
Score = 124 bits (310), Expect(2) = 5e-40
Identities = 64/138 (46%), Positives = 88/138 (63%), Gaps = 4/138 (2%)
Frame = +1
Query: 238 NLPGVTAPFEGVFDPAGFLATASIKDVRRWRESEITHGRVAMLAALGFVVGEQLQDFPLF 417
+LPG P G FDP GF A K ++R+RE+E+THGRVAMLA +GF+VGE ++
Sbjct: 36 DLPGALPPV-GFFDPLGFAEKADDKTLKRYREAEVTHGRVAMLAVVGFLVGEAVEGSSFL 94
Query: 418 FNWDGRVSGPAIYHFQQIGQGFWEPLLIA-IGVAESYRVAVGWATPTGTGFNS---LKDD 585
F D ++SGPAI HF Q+ G W+ L++ IG AE+ R +GW P ++ L+D+
Sbjct: 95 F--DAQISGPAITHFTQVPDG-WDALIVTFIGAAEAQRAQIGWVDPADASYDQPGLLRDN 151
Query: 586 YEPGDLGFDPLGPQAHRP 639
Y PGD+GFDPLG + P
Sbjct: 152 YYPGDIGFDPLGLKPEDP 169
Score = 64.3 bits (155), Expect(2) = 5e-40
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = +2
Query: 614 PWGLKPTDPEELKVMQTKELNNGRLAMIAIAAFVAQELVEQTEIFEHLA 760
P GLKP DPEEL +M TKEL NGRLAM+A A F+AQE V+ I EH +
Sbjct: 161 PLGLKPEDPEELNIMITKELQNGRLAMLAAAGFLAQEAVDGKGILEHFS 209
