Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001310A_C01 KCC001310A_c01
(535 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO65338.1| unknown [Streptomyces murayamaensis] 39 0.056
ref|ZP_00138272.1| COG1450: Type II secretory pathway, component... 31 0.13
dbj|BAB40056.1| OSJNBa0004G10.3 [Oryza sativa (japonica cultivar... 37 0.21
gb|EAA36893.1| GLP_541_5204_3867 [Giardia lamblia ATCC 50803] 36 0.28
ref|XP_299452.2| hypothetical protein XP_299452 [Homo sapiens] 36 0.36
>gb|AAO65338.1| unknown [Streptomyces murayamaensis]
Length = 810
Score = 38.5 bits (88), Expect = 0.056
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 367 APPSRRCGSWAASPRPRTRYRCSPFARRTAAAATPSAK-----SWVTSPRWCCLTSAS 525
APPS R +WA RTR CSP A RTA +AT SA+ W SPR S S
Sbjct: 713 APPSWRV-NWATPSARRTR--CSPSASRTATSATASARWRGPTGWPRSPRRAATRSRS 767
>ref|ZP_00138272.1| COG1450: Type II secretory pathway, component PulD [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 953
Score = 30.8 bits (68), Expect(2) = 0.13
Identities = 24/64 (37%), Positives = 29/64 (44%), Gaps = 1/64 (1%)
Frame = -3
Query: 503 HRGLVTQDLALGVAAAAVRLA-KGEHR*RVRGRGEAAQEPQRLDGGAVASKRTRSQSGRG 327
HR D AL AAA A +G R RGRG A +P+R G + SQ R
Sbjct: 10 HRSAAGADRALASRAAAPACAGRGGGRRVARGRGVARSDPERYGG----RRGDPSQPARS 65
Query: 326 GSTR 315
G+ R
Sbjct: 66 GTRR 69
Score = 25.4 bits (54), Expect(2) = 0.13
Identities = 24/67 (35%), Positives = 31/67 (45%), Gaps = 7/67 (10%)
Frame = -2
Query: 204 GREATRP-------RLRDGIACLTG*RPAQQAPQVARRASHDYLGPKKIARGYRASAERA 46
GR AT P R+R G+A L G +P AP+ R A ++ RG ERA
Sbjct: 73 GRPATGPMATGLRQRVRRGLAALAGAQPGGVAPERQRGAGD---ASRRSFRGALRLFERA 129
Query: 45 SPKQRAG 25
+RAG
Sbjct: 130 --VRRAG 134
>dbj|BAB40056.1| OSJNBa0004G10.3 [Oryza sativa (japonica cultivar-group)]
gi|21104548|dbj|BAB93143.1| B1008C01.25 [Oryza sativa
(japonica cultivar-group)]
Length = 200
Score = 36.6 bits (83), Expect = 0.21
Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +1
Query: 277 STQWCAQEPLH*GLVLPPRPL*ERVRLEATAPPSRRCGSWAASPRPRTRYRCSPF---AR 447
+T+ A P G PPR L T PP R AA+PR RC+P AR
Sbjct: 95 TTRRDATTPPRHGTAAPPR-------LRRTTPPPRNA---AAAPRAALPPRCTPHRCRAR 144
Query: 448 RTAAAATPSAKSWVTSPRWCC 510
R AAAA P S +P C
Sbjct: 145 RHAAAAPPRRHSAAATPALRC 165
>gb|EAA36893.1| GLP_541_5204_3867 [Giardia lamblia ATCC 50803]
Length = 445
Score = 36.2 bits (82), Expect = 0.28
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +2
Query: 188 LVASRPRPSSSLLTASTCRAFSVRPSRLTAPP 283
L ASRPR S S++TAS+ R S PSR+T PP
Sbjct: 367 LYASRPRTSESIITASS-RPSSAAPSRVTTPP 397
>ref|XP_299452.2| hypothetical protein XP_299452 [Homo sapiens]
Length = 1257
Score = 35.8 bits (81), Expect = 0.36
Identities = 25/75 (33%), Positives = 39/75 (51%), Gaps = 4/75 (5%)
Frame = -3
Query: 413 GRGEAAQEPQRLDGGAVASKRTRSQSG---RGG-STRPQCRGSCAHHWVERSSGLALLKM 246
G+G+ + + + GGA+A +R Q G RG S +P R S HW+ R G+ LL+
Sbjct: 723 GQGDGSTKKGSMQGGAIAGFPSRPQLGQPPRGQLSAQPAFRSSRTTHWLAR-GGVNLLEQ 781
Query: 245 PGMYLPSGVNCLASA 201
+ P G+ L +A
Sbjct: 782 GPLNQPGGLPVLRAA 796
