Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001308A_C01 KCC001308A_c01
(553 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198917.1| expressed protein [Arabidopsis thaliana] gi|975... 78 7e-14
ref|NP_501593.1| metallothionein-I activator like (4J910) [Caeno... 64 1e-09
ref|XP_127976.1| metallothionein-I activator [Mus musculus] gi|2... 63 3e-09
ref|NP_005025.1| DNA directed RNA polymerase II polypeptide K; p... 63 3e-09
dbj|BAB25485.2| unnamed protein product [Mus musculus] gi|263599... 63 3e-09
>ref|NP_198917.1| expressed protein [Arabidopsis thaliana] gi|9759147|dbj|BAB09703.1|
contains similarity to metallothionein-I gene
transcription activator~gene_id:MEE6.8 [Arabidopsis
thaliana] gi|15028303|gb|AAK76628.1| unknown protein
[Arabidopsis thaliana] gi|19310615|gb|AAL85038.1|
unknown protein [Arabidopsis thaliana]
gi|21618239|gb|AAM67289.1| DNA directed RNA polymerase
II polypeptide K [Arabidopsis thaliana]
Length = 51
Score = 78.2 bits (191), Expect = 7e-14
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = +3
Query: 270 VPYICGQCGSEISLKPGDIIQCRECGYRILYKKRTNKVVQFEAR 401
V Y+CG CG E +LK GD+IQCRECGYRILYKKRT +VVQ+EAR
Sbjct: 8 VTYVCGDCGQENTLKSGDVIQCRECGYRILYKKRTRRVVQYEAR 51
>ref|NP_501593.1| metallothionein-I activator like (4J910) [Caenorhabditis elegans]
gi|7499728|pir||T21305 hypothetical protein F23B2.13 -
Caenorhabditis elegans gi|5596645|emb|CAB51465.1|
Hypothetical protein F23B2.13 [Caenorhabditis elegans]
Length = 62
Score = 63.9 bits (154), Expect = 1e-09
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +3
Query: 276 YICGQCGSEISLKPGDIIQCRECGYRILYKKRTNKVVQFEAR 401
YICG+C +E +KP D I+CRECGYRILYKKR K++ ++AR
Sbjct: 21 YICGECHAENEIKPKDAIRCRECGYRILYKKRCRKLMVYDAR 62
>ref|XP_127976.1| metallothionein-I activator [Mus musculus]
gi|2842662|sp|Q63871|RPCX_MOUSE DNA-directed RNA
polymerases I, II, and III 7.0 kDa polypeptide
(ABC10-alpha) (RPB7.0) (Metallothionein-I gene
transcription activator) gi|12833421|dbj|BAB22516.1|
unnamed protein product [Mus musculus]
gi|20306771|gb|AAH28543.1| Mt1a protein [Mus musculus]
Length = 58
Score = 62.8 bits (151), Expect = 3e-09
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +3
Query: 276 YICGQCGSEISLKPGDIIQCRECGYRILYKKRTNKVVQFEAR 401
YICG+C +E +K D I+CRECGYRI+YKKRT ++V F+AR
Sbjct: 17 YICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58
>ref|NP_005025.1| DNA directed RNA polymerase II polypeptide K; polymerase (RNA) II
(DNA directed) polypeptide K (7.0kD); DNA directed RNA
polymerases I, II, and III 7.0 kda polypeptide [Homo
sapiens] gi|1710664|sp|P53803|RPCX_HUMAN DNA-directed
RNA polymerases I, II, and III 7.0 kDa polypeptide
(ABC10-alpha) (RPB7.0) (RPB10alpha) (RPABC4)
gi|7451882|pir||I37558 RNA polymerase II - human
gi|717187|emb|CAA87656.1| RNA polymerase II [Homo
sapiens] gi|7981272|emb|CAB91873.1| RPB10alpha [Homo
sapiens] gi|12654013|gb|AAH00806.1| DNA directed RNA
polymerase II polypeptide K [Homo sapiens]
gi|17390349|gb|AAH18157.1| DNA directed RNA polymerase
II polypeptide K [Homo sapiens]
Length = 58
Score = 62.8 bits (151), Expect = 3e-09
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +3
Query: 276 YICGQCGSEISLKPGDIIQCRECGYRILYKKRTNKVVQFEAR 401
YICG+C +E +K D I+CRECGYRI+YKKRT ++V F+AR
Sbjct: 17 YICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 58
>dbj|BAB25485.2| unnamed protein product [Mus musculus] gi|26359970|dbj|BAB25578.2|
unnamed protein product [Mus musculus]
Length = 99
Score = 62.8 bits (151), Expect = 3e-09
Identities = 26/42 (61%), Positives = 34/42 (80%)
Frame = +3
Query: 276 YICGQCGSEISLKPGDIIQCRECGYRILYKKRTNKVVQFEAR 401
YICG+C +E +K D I+CRECGYRI+YKKRT ++V F+AR
Sbjct: 58 YICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR 99
