Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001306A_C01 KCC001306A_c01
(427 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB20637.1| P0475H04.3 [Oryza sativa (japonica cultivar-grou... 41 0.003
ref|NP_102360.1| hypothetical glycine-rich protein [Mesorhizobiu... 39 0.013
dbj|BAA99512.1| P0489A01.2 [Oryza sativa (japonica cultivar-group)] 39 0.017
pir||A35630 regulatory protein algR3 - Pseudomonas aeruginosa 39 0.022
ref|NP_641010.1| rod shape-determining protein [Xanthomonas axon... 38 0.028
>dbj|BAB20637.1| P0475H04.3 [Oryza sativa (japonica cultivar-group)]
gi|21104572|dbj|BAB93166.1| B1146F03.21 [Oryza sativa
(japonica cultivar-group)]
Length = 282
Score = 41.2 bits (95), Expect = 0.003
Identities = 34/122 (27%), Positives = 48/122 (38%), Gaps = 2/122 (1%)
Frame = -3
Query: 404 RRQPVAAQDAAQHTRPHHQ*VQIGRRPRHCSRQRAGCSSC--DRAACGTTVD*SRKGHPQ 231
RR+ + AAQ Q PR CS R SC A C ++ R+G +
Sbjct: 94 RRRHTKEESAAQIDAAAQQEESAAVGPRSCSSGRYSLLSCLPSAATCRSSAIDRREGKKR 153
Query: 230 RCNASDSSGASAATRNVQLRRDLDSRRSGTRNTGRCECSASSDRAGGRSAQAAPGRHDVV 51
A A R V + + S R TGR + S + RAG R+A + R +
Sbjct: 154 ESREVAGGSAVPAEREVDSSAEREGVSSSGRPTGRRKKSGGARRAGERAADGSAARDEAS 213
Query: 50 SN 45
S+
Sbjct: 214 SS 215
>ref|NP_102360.1| hypothetical glycine-rich protein [Mesorhizobium loti]
gi|14021534|dbj|BAB48146.1| hypothetical glycine-rich
protein [Mesorhizobium loti]
Length = 3145
Score = 39.3 bits (90), Expect = 0.013
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 5/132 (3%)
Frame = +3
Query: 24 WRGQLGSVGDDIMSPRSCLSASPTSSVATRTTFTSTCIPRPRAAGVQVSAQLNISRRSAS 203
W GS+G D+++ + PT S A TT TS I + +A + + +
Sbjct: 267 WSVTTGSIGADVLTISGSPTRQPTLSTAGTTTITSLNISGSNTLTINGAAVILAATSGIT 326
Query: 204 AAAIASVAPLGMTFPGSIDGGAARGSVAAAATSSLAGA-----VAGSPSNLDLLVVGPGV 368
A+ A + G G+ GA + + T ++ + + G+ SN L + V
Sbjct: 327 MASPAIITGTGTIAAGTNITGAGTVGIPISTTGTITASGGTLNLTGTVSNRTLAIA--NV 384
Query: 369 LGSVLRRDWLAS 404
GS+L+ D S
Sbjct: 385 AGSILKLDGTVS 396
>dbj|BAA99512.1| P0489A01.2 [Oryza sativa (japonica cultivar-group)]
Length = 1212
Score = 38.9 bits (89), Expect = 0.017
Identities = 24/56 (42%), Positives = 24/56 (42%)
Frame = -1
Query: 427 PVAVPPCTDASQSRRRTLPNTPGPTTSRSRLDGDPATAPARELVAAAATEPRAAPP 260
P PPC A RR P P TT ATAP R AA AT PR PP
Sbjct: 53 PPPSPPC--AQCRRRHATPPPPRHTTPPPPRHAAAATAPQRHAAAAVATPPRQPPP 106
Score = 31.6 bits (70), Expect = 2.7
Identities = 15/39 (38%), Positives = 18/39 (45%)
Frame = -2
Query: 423 WLCRPAQTPASRGAGRCPTHPAPPPVGPDWTATPPLLPP 307
W R P + A R P+ PAPP D +PP PP
Sbjct: 708 WRRRYIILPGRQAASRAPSPPAPPSPPQDPAPSPPHAPP 746
>pir||A35630 regulatory protein algR3 - Pseudomonas aeruginosa
Length = 340
Score = 38.5 bits (88), Expect = 0.022
Identities = 29/97 (29%), Positives = 36/97 (36%)
Frame = -1
Query: 427 PVAVPPCTDASQSRRRTLPNTPGPTTSRSRLDGDPATAPARELVAAAATEPRAAPPSIDP 248
PVA P A+++ P PA PA A A +P A P + P
Sbjct: 237 PVAKPAAKPAAKTAAAKPAAKPAAKHVAKPAAAKPAAKPAANAAAKPAAKPAAKPVAAKP 296
Query: 247 GKVIPSGATLAIAAALALRREMFSCAETWTPAARGRG 137
P+ A A AAA S A + TPAA G
Sbjct: 297 AAAKPATAPAANAAATPSATAAASSAASATPAAGSNG 333
>ref|NP_641010.1| rod shape-determining protein [Xanthomonas axonopodis pv. citri
str. 306] gi|21106765|gb|AAM35546.1| rod
shape-determining protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 450
Score = 38.1 bits (87), Expect = 0.028
Identities = 42/139 (30%), Positives = 55/139 (39%), Gaps = 3/139 (2%)
Frame = -1
Query: 421 AVPPCTDASQSRRRTLPNTPGPTTSRSRLDGDPATAPARELVAAAATEPRA--APPSIDP 248
A P A+ RT P TP S + +D A + AA PRA AP S P
Sbjct: 308 AAPAAAPATAPVSRT-PGTPTGGASHAAIDAARPPAASSGAATAAGVAPRAQPAPASAAP 366
Query: 247 GKVIPSGATLAIAAA-LALRREMFSCAETWTPAARGRGIQVDVNVVRVATELVGEALKQL 71
G V PSGA +I A L+ R E P AR Q AT G + +
Sbjct: 367 G-VQPSGAAASIRQANLSARPSTSDVNENQNPNARPASPQQGTRA--AATGQSGASNRNA 423
Query: 70 RGDMMSSPTDPSWPLHRSQ 14
++P D +P+ S+
Sbjct: 424 PPTQGAAPNDSRFPIPDSR 442
