Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001300A_C01 KCC001300A_c01
(571 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_628564.1| putative hydrolase [Streptomyces coelicolor A3(... 37 0.19
ref|ZP_00140064.1| COG2141: Coenzyme F420-dependent N5,N10-methy... 36 0.32
ref|ZP_00057463.1| COG0842: ABC-type multidrug transport system,... 36 0.42
ref|NP_335945.1| transketolase [Mycobacterium tuberculosis CDC15... 34 1.2
ref|NP_855136.1| PROBABLE TRANSKETOLASE TKT (TK) [Mycobacterium ... 34 1.2
>ref|NP_628564.1| putative hydrolase [Streptomyces coelicolor A3(2)]
gi|8894745|emb|CAB95906.1| putative hydrolase
[Streptomyces coelicolor A3(2)]
Length = 352
Score = 37.0 bits (84), Expect = 0.19
Identities = 28/78 (35%), Positives = 37/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 219 LHRVLGRPGRSRLGVKIKGIPGPRARHVEPMDARAFIPRFWKRAWRPGEARKAAKSP-AD 395
+HR GR R+ + G+PGP AR ++ A W+ P R +P A
Sbjct: 27 VHRT-GRSARAGGSERSLGVPGPMARRIDVTGAGGVRLAAWEFGDPPKTGRGHDPAPAAP 85
Query: 396 AGPQPSA-GCHWLPGVLM 446
GP PSA G LPGVL+
Sbjct: 86 GGPAPSASGAGDLPGVLL 103
>ref|ZP_00140064.1| COG2141: Coenzyme F420-dependent N5,N10-methylene
tetrahydromethanopterin reductase and related
flavin-dependent oxidoreductases [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 813
Score = 36.2 bits (82), Expect = 0.32
Identities = 29/81 (35%), Positives = 39/81 (47%), Gaps = 4/81 (4%)
Frame = -3
Query: 440 HSG*PVAAGRGLRA----RISRRLRSFPRLARTPRTFPKTRNKCTRVHGLYMPRSGAWNA 273
H G PV + RA R+SRR RS P LA+ PRT P R L +PR
Sbjct: 280 HRGRPVGRQQADRAWRQPRLSRRTRSRPPLAQRPRTHP------ARPGALEVPRGR---- 329
Query: 272 FNLHPEPRPARTSQYSVQNQG 210
L P+ PA T ++++ +G
Sbjct: 330 -RLLPQRPPAATPRHALNAEG 349
>ref|ZP_00057463.1| COG0842: ABC-type multidrug transport system, permease component
[Thermobifida fusca]
Length = 395
Score = 35.8 bits (81), Expect = 0.42
Identities = 34/129 (26%), Positives = 49/129 (37%), Gaps = 10/129 (7%)
Frame = -3
Query: 467 HVHTQIKHQHSG*PV----AAGRGLRARISRRLRSFPRLARTPRT-FPKTRNKCTRVHGL 303
HVH H+ SG + A G+G R R R ++ R R P +C R
Sbjct: 16 HVHPL--HRRSGAALRRSGAHGQGTHRRTRRTRRPDRQIRRENRRGVPDRGGRCRRTRES 73
Query: 302 YMPRSGAWNAFNLHPEPRPARTSQYSVQNQGGRATA*SRQEDHSTRH-----QALTVTTH 138
+ PR + A LHP P R + A +Q RH + +T T +
Sbjct: 74 HPPRRVHYAAHRLHPFRAPRRRTPRFAAGPARHGNAPRQQPGRRVRHPDRGDRRVTATEN 133
Query: 137 ATLPKRSPG 111
T+ + PG
Sbjct: 134 TTVDRPRPG 142
>ref|NP_335945.1| transketolase [Mycobacterium tuberculosis CDC1551]
gi|13881111|gb|AAK45759.1| transketolase [Mycobacterium
tuberculosis CDC1551]
Length = 725
Score = 34.3 bits (77), Expect = 1.2
Identities = 17/48 (35%), Positives = 26/48 (53%)
Frame = -1
Query: 334 RGINARASMGSTCLALGPGMPLIFTPSRDLPGRPNTLCKTKEGVLPPN 191
+ + RA+ G+ ALGP +P ++ S DL G NT K + PP+
Sbjct: 398 KALATRAASGAVLSALGPKLPELWGGSADLAGSNNTTIKGADSFGPPS 445
>ref|NP_855136.1| PROBABLE TRANSKETOLASE TKT (TK) [Mycobacterium bovis subsp. bovis
AF2122/97] gi|31618233|emb|CAD96151.1| PROBABLE
TRANSKETOLASE TKT (TK) [Mycobacterium bovis subsp. bovis
AF2122/97]
Length = 700
Score = 34.3 bits (77), Expect = 1.2
Identities = 17/48 (35%), Positives = 26/48 (53%)
Frame = -1
Query: 334 RGINARASMGSTCLALGPGMPLIFTPSRDLPGRPNTLCKTKEGVLPPN 191
+ + RA+ G+ ALGP +P ++ S DL G NT K + PP+
Sbjct: 373 KALATRAASGAVLSALGPKLPELWGGSADLAGSNNTTIKGADSFGPPS 420
