Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001297A_C01 KCC001297A_c01
(508 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB50707.1| dJ439F8.2 (supported by GENSCAN and GENEWISE) [H... 38 0.063
ref|NP_055061.1| cadherin EGF LAG seven-pass G-type receptor 1; ... 38 0.063
ref|ZP_00092697.1| COG1020: Non-ribosomal peptide synthetase mod... 38 0.083
emb|CAC86999.1| alpha 2B adrenergic receptor [Chaetophractus vil... 37 0.11
emb|CAD20474.1| alpha adrenergic receptor 2B [Zaedyus pichiy] 35 0.41
>emb|CAB50707.1| dJ439F8.2 (supported by GENSCAN and GENEWISE) [Homo sapiens]
Length = 1181
Score = 38.1 bits (87), Expect = 0.063
Identities = 32/93 (34%), Positives = 42/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 53 CPRTSGSAWGPVCPASLVPVTADKQ*AIAGAR--SWRGVPFPTRIRIVDTRRGLNRGAPT 226
C G+A P P L+ V D + +AG R S G P P ++R+V R APT
Sbjct: 48 CTYAVGAACTPRAPRELLDVGRDGR--LAGRRRVSGAGRPLPLQVRLVA------RSAPT 99
Query: 227 *RPQRLGGRRHAAGCRCYQLKRAADGARSVGQL 325
+RL R H GC + + GAR G L
Sbjct: 100 ALSRRLRARTHLPGCGA-RARLCGTGARLCGAL 131
>ref|NP_055061.1| cadherin EGF LAG seven-pass G-type receptor 1; cadherin EGF LAG
seven-pass G-type receptor 1, flamingo (Drosophila)
homolog; protocadherin flamingo 2 [Homo sapiens]
gi|22095551|sp|Q9NYQ6|CLR1_HUMAN Cadherin EGF LAG
seven-pass G-type receptor 1 precursor (Flamingo homolog
2) (hFmi2) gi|7407148|gb|AAF61930.1|AF231024_1
protocadherin Flamingo 2 [Homo sapiens]
Length = 3014
Score = 38.1 bits (87), Expect = 0.063
Identities = 32/93 (34%), Positives = 42/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 53 CPRTSGSAWGPVCPASLVPVTADKQ*AIAGAR--SWRGVPFPTRIRIVDTRRGLNRGAPT 226
C G+A P P L+ V D + +AG R S G P P ++R+V R APT
Sbjct: 48 CTYAVGAACTPRAPRELLDVGRDGR--LAGRRRVSGAGRPLPLQVRLVA------RSAPT 99
Query: 227 *RPQRLGGRRHAAGCRCYQLKRAADGARSVGQL 325
+RL R H GC + + GAR G L
Sbjct: 100 ALSRRLRARTHLPGCGA-RARLCGTGARLCGAL 131
>ref|ZP_00092697.1| COG1020: Non-ribosomal peptide synthetase modules and related
proteins [Azotobacter vinelandii]
Length = 4332
Score = 37.7 bits (86), Expect = 0.083
Identities = 35/100 (35%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = +2
Query: 59 RTSGSAWGPVCPASLVPVTADKQ*AIAGARSWRGVPFPTRIRIVDTRRGLNRGAPT*RPQ 238
RT G+ P A P AGAR RG R+ D RR R P PQ
Sbjct: 1535 RTGGNPRAPAVAAGGAPGRG------AGARGRRGCATG---RLPDQRRRTRRSGPGRTPQ 1585
Query: 239 RLGGRR----HAAGCRCYQLKRAADGARSVGQLGAEPAGL 346
GR+ H AG + AAD R G GA AGL
Sbjct: 1586 ARPGRQPAGVHGAGAVRPPRRAAADADRQAGSQGAAGAGL 1625
>emb|CAC86999.1| alpha 2B adrenergic receptor [Chaetophractus villosus]
Length = 383
Score = 37.4 bits (85), Expect = 0.11
Identities = 38/111 (34%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Frame = -3
Query: 392 KEPRPPRA*SIMARQTNLQAQRRAVRRSGRHPLLF*VGSSGSLPHDGGL----PGAVAFK 225
++PRP A A L + A R + HP VG G P D G PG A
Sbjct: 206 RQPRPLPA-GASASLPTLASAGAAAREADGHPKAAGVGEEGETPEDPGAQDVPPGWPAPP 264
Query: 224 SGRLGSSRAACQQCVSASEKELPASFSPQLWLIAYPL*PAPTRRDKPVPKP 72
SGR G S AAC A +E + PQ +A P PA R P P
Sbjct: 265 SGRQGPSEAAC----GAPPQEEGEALGPQ---VAAP--PASARGPALRPLP 306
>emb|CAD20474.1| alpha adrenergic receptor 2B [Zaedyus pichiy]
Length = 383
Score = 35.4 bits (80), Expect = 0.41
Identities = 37/111 (33%), Positives = 43/111 (38%), Gaps = 4/111 (3%)
Frame = -3
Query: 392 KEPRPPRA*SIMARQTNLQAQRRAVRRSGRHPLLF*VGSSGSLPHDGGL----PGAVAFK 225
++PRP A A L A A R + HP G G P D G PG A
Sbjct: 206 RQPRPLPA-GASASLPTLAAAGAAAREADGHPKAAGAGEEGETPEDPGAQDEPPGWPAPP 264
Query: 224 SGRLGSSRAACQQCVSASEKELPASFSPQLWLIAYPL*PAPTRRDKPVPKP 72
SGR G S A C A +E + PQ +A P PA R P P
Sbjct: 265 SGRQGPSAATC----GAPPQEEGEALGPQ---VAAP--PASARGPALRPPP 306
