Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001292A_C01 KCC001292A_c01
(1130 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC40922.1| unnamed protein product [Mus musculus] 43 0.012
ref|XP_097735.1| hypothetical protein XP_097735 [Homo sapiens] 40 0.075
ref|XP_126284.2| RIKEN cDNA B230396K10 gene [Mus musculus] 40 0.097
ref|NP_062289.1| nuclear localization signals binding protein 1 ... 39 0.13
dbj|BAC87611.1| unnamed protein product [Homo sapiens] 39 0.13
>dbj|BAC40922.1| unnamed protein product [Mus musculus]
Length = 147
Score = 42.7 bits (99), Expect = 0.012
Identities = 21/48 (43%), Positives = 26/48 (53%), Gaps = 3/48 (6%)
Frame = +1
Query: 769 WKHYFYGWLSRSFPRA---SNTHAHTHIHTHTHRAGCVLLLSCNTHTH 903
WK+Y GWL F A ++TH HTH HTHTH +L + H H
Sbjct: 102 WKNYSRGWLLYLFTGAHAHTHTHTHTHTHTHTHTH---ILAYIHVHAH 146
>ref|XP_097735.1| hypothetical protein XP_097735 [Homo sapiens]
Length = 101
Score = 40.0 bits (92), Expect = 0.075
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 811 RASNTHAHTHIHTHTHRAGCVLLLSCNTHTHTS 909
+ +NTH HTH HT+THRA L LS H +S
Sbjct: 45 KQNNTHTHTHTHTYTHRAPLSLALSSGIHRTSS 77
>ref|XP_126284.2| RIKEN cDNA B230396K10 gene [Mus musculus]
Length = 106
Score = 39.7 bits (91), Expect = 0.097
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 853 CVCVCVCARVCYWP-WEMNVIAIRKSNASTRQLP 755
CVCVCVC VC WP W + ++A+ + A + P
Sbjct: 56 CVCVCVCVCVCVWPSWVLAMMAVDRGKAQDEEQP 89
Score = 33.5 bits (75), Expect = 7.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -1
Query: 905 VCVCVLQDNNKTQPALCVCVCMCVCACV 822
VC CV +CVCVC+CVC CV
Sbjct: 49 VCSCV---------RVCVCVCVCVCVCV 67
>ref|NP_062289.1| nuclear localization signals binding protein 1 [Mus musculus]
gi|8493519|gb|AAB35286.2| nuclear localization signal
binding protein [Mus musculus]
Length = 143
Score = 39.3 bits (90), Expect = 0.13
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +1
Query: 817 SNTHAHTHIHTHTHRAGCVLLLSCNTHTHTSRARVGSSSCAGIQYQ 954
++TH HTH HTHTH +THTHT + + + S AG+ Q
Sbjct: 66 THTHTHTHTHTHTH-------THTHTHTHTPTSLLPARSQAGLLCQ 104
>dbj|BAC87611.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 39.3 bits (90), Expect = 0.13
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -1
Query: 905 VCVCVLQDNNKTQPALCVCVCMCVCACVLLAL 810
VCVCVL +CVC+C+CVC CV L L
Sbjct: 16 VCVCVLC----VSVCVCVCLCVCVCVCVCLCL 43
Score = 36.2 bits (82), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (58%)
Frame = -1
Query: 905 VCVCVLQDNNKTQPALCVCVCMCVCACVLLAL 810
VCVCV +C+CVC+CVC C+ L +
Sbjct: 14 VCVCVCVLCVSVCVCVCLCVCVCVCVCLCLCV 45
Score = 35.8 bits (81), Expect = 1.4
Identities = 15/29 (51%), Positives = 18/29 (61%)
Frame = -1
Query: 905 VCVCVLQDNNKTQPALCVCVCMCVCACVL 819
VCVCV +CVCVC+C+C CVL
Sbjct: 25 VCVCVCL-------CVCVCVCVCLCLCVL 46
Score = 35.4 bits (80), Expect = 1.8
Identities = 15/32 (46%), Positives = 19/32 (58%)
Frame = -1
Query: 905 VCVCVLQDNNKTQPALCVCVCMCVCACVLLAL 810
VC+CV +CVC+C+CVC CV L L
Sbjct: 137 VCICVF-----VCVWVCVCLCVCVCLCVCLCL 163
Score = 34.7 bits (78), Expect = 3.1
Identities = 15/32 (46%), Positives = 19/32 (58%)
Frame = -1
Query: 905 VCVCVLQDNNKTQPALCVCVCMCVCACVLLAL 810
+CVCV LCVCVC+CVC C+ L +
Sbjct: 87 LCVCVC---GFVCLCLCVCVCLCVCVCLHLCV 115
Score = 34.7 bits (78), Expect = 3.1
Identities = 15/32 (46%), Positives = 18/32 (55%)
Frame = -1
Query: 905 VCVCVLQDNNKTQPALCVCVCMCVCACVLLAL 810
VCVC LCVCVC+CVC C+ + L
Sbjct: 147 VCVC-----------LCVCVCLCVCLCLCVFL 167
Score = 33.9 bits (76), Expect = 5.3
Identities = 13/32 (40%), Positives = 19/32 (58%)
Frame = -1
Query: 905 VCVCVLQDNNKTQPALCVCVCMCVCACVLLAL 810
VC CV ++CVC+C+CVC CV + +
Sbjct: 123 VCFCV---------SVCVCLCVCVCICVFVCV 145
Score = 33.5 bits (75), Expect = 7.0
Identities = 10/15 (66%), Positives = 11/15 (72%)
Frame = -2
Query: 859 CACVCVCVCARVCYW 815
C CVCVC+C VC W
Sbjct: 132 CLCVCVCICVFVCVW 146
Score = 33.5 bits (75), Expect = 7.0
Identities = 14/30 (46%), Positives = 18/30 (59%)
Frame = -1
Query: 905 VCVCVLQDNNKTQPALCVCVCMCVCACVLL 816
VCVCV ++C+CVC+ VC CV L
Sbjct: 35 VCVCVCLCLCVLSVSVCLCVCVSVCLCVCL 64
