KCC001291A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001291A_C01 KCC001291A_c01
ttcgcacagctctatattccggaagccctgtctctctactgaacacgaagactttgacta
taattgccgtgaggaacaatGGGCAAGGGCTGTGGTGCTGCGCTGGGCAAGGGCAAGAAG
AAGGAGACGACCGCTGCCGAGGCTGCCGCCCCAGCTGCTGCTGCTGCTGAGCCCGCTGCG
GAGCCCGCTGCGGCCCCCACGCCGGCCCCCGCGCCGGCCGCTGAGGCTGCCCCCGCAGTT
GCCGCTGCTGCGCCGGCCCCGGCCGCTCCCGCCGAGCCTGCGAAGATGGCGCACGACTAC
AAGCTGAAGGCCCACCCGGCGATTCCTGCGCCCGAGGGCCCGCTGCTGGTCTGCATTCTG
GACGGCTTCGGCGAGAACGAGTACAAGGATGAGTTCAACGCCGTGCACGTGGCTAAGACG
CCCACTGTGGACGCGCTGCGCGCTGTGCCCCATCGCTTCCGTTCCATCAAGGCGCACGGA
AAGGCTGTGGGCCTGCCCAGCGATGCCGACATGGGCAACAGCGAGGTGGGGCACAACGCC
CTGGGCTCGGGCCAGGTGGTGGACCAGGGCGCGCGCCTGGTGGACCTGGCGCTGGAGACC
GGCCGTATGTTCTCGGACCCCGGCTGGAAGCTCATCAGCGAGGCCTTCCCCTCCCACACC
GTCCACTTCATCGGCCTGCTGTCCGACGGTGGCGTGCACTCGCGCGCCGATCAGCTGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001291A_C01 KCC001291A_c01
         (718 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK52421.1| phosphoglyceromutase [Chlamydomonas reinhardtii]       296  2e-79
sp|Q42908|PMGI_MESCR 2,3-bisphosphoglycerate-independent phospho...   159  3e-38
emb|CAA83914.1| phosphoglycerate mutase [Zea mays]                    157  2e-37
sp|P35493|PMGI_RICCO 2,3-bisphosphoglycerate-independent phospho...   157  2e-37
emb|CAA06215.1| apgm [Malus x domestica]                              156  3e-37

>gb|AAK52421.1| phosphoglyceromutase [Chlamydomonas reinhardtii]
          Length = 557

 Score =  296 bits (759), Expect = 2e-79
 Identities = 144/144 (100%), Positives = 144/144 (100%)
 Frame = +1

Query: 286 MAHDYKLKAHPAIPAPEGPLLVCILDGFGENEYKDEFNAVHVAKTPTVDALRAVPHRFRS 465
           MAHDYKLKAHPAIPAPEGPLLVCILDGFGENEYKDEFNAVHVAKTPTVDALRAVPHRFRS
Sbjct: 1   MAHDYKLKAHPAIPAPEGPLLVCILDGFGENEYKDEFNAVHVAKTPTVDALRAVPHRFRS 60

Query: 466 IKAHGKAVGLPSDADMGNSEVGHNALGSGQVVDQGARLVDLALETGRMFSDPGWKLISEA 645
           IKAHGKAVGLPSDADMGNSEVGHNALGSGQVVDQGARLVDLALETGRMFSDPGWKLISEA
Sbjct: 61  IKAHGKAVGLPSDADMGNSEVGHNALGSGQVVDQGARLVDLALETGRMFSDPGWKLISEA 120

Query: 646 FPSHTVHFIGLLSDGGVHSRADQL 717
           FPSHTVHFIGLLSDGGVHSRADQL
Sbjct: 121 FPSHTVHFIGLLSDGGVHSRADQL 144

>sp|Q42908|PMGI_MESCR 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
           (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I)
           gi|2118335|pir||S60473 phosphoglycerate mutase (EC
           5.4.2.1), 2, 3-bisphosphoglycerate-independent - common
           ice plant gi|602426|gb|AAA86979.1| phosphoglyceromutase
          Length = 559

 Score =  159 bits (403), Expect = 3e-38
 Identities = 78/141 (55%), Positives = 110/141 (77%), Gaps = 1/141 (0%)
 Frame = +1

Query: 298 YKLKAHPAIPAPEGPLLVCILDGFGENEYKDEFNAVHVAKTPTVDALR-AVPHRFRSIKA 474
           +KL  HP +P  +  L + +LDG+GE    +++N +HVA+TPT+D+L+   P ++R I+A
Sbjct: 8   WKLADHPKLPKGK-TLAMVVLDGWGEAS-ANQYNCIHVAETPTMDSLKQGAPEKWRLIRA 65

Query: 475 HGKAVGLPSDADMGNSEVGHNALGSGQVVDQGARLVDLALETGRMFSDPGWKLISEAFPS 654
           HGKAVGLP++ DMGNSEVGHNALG+G++  QGA+LVDLALE+G+++   G+  I E+F +
Sbjct: 66  HGKAVGLPTEDDMGNSEVGHNALGAGRIYAQGAKLVDLALESGKIYDGEGFNYIKESFET 125

Query: 655 HTVHFIGLLSDGGVHSRADQL 717
           +T+H IGLLSDGGVHSR DQL
Sbjct: 126 NTLHLIGLLSDGGVHSRLDQL 146

>emb|CAA83914.1| phosphoglycerate mutase [Zea mays]
          Length = 559

 Score =  157 bits (396), Expect = 2e-37
 Identities = 78/141 (55%), Positives = 105/141 (74%), Gaps = 1/141 (0%)
 Frame = +1

Query: 298 YKLKAHPAIPAPEGPLLVCILDGFGENEYKDEFNAVHVAKTPTVDALR-AVPHRFRSIKA 474
           + L  HP +P  + P+ V +LDG+GE    D++N +HVA+TP +D+L+   P ++R +KA
Sbjct: 8   WTLPDHPKLPKGK-PVAVVVLDGWGEAN-PDQYNCIHVAQTPVMDSLKNGAPEKWRLVKA 65

Query: 475 HGKAVGLPSDADMGNSEVGHNALGSGQVVDQGARLVDLALETGRMFSDPGWKLISEAFPS 654
           HG AVGLPSD DMGNSEVGHNALG+G++  QGA+LVD AL +G+++   G+  I E+F S
Sbjct: 66  HGTAVGLPSDDDMGNSEVGHNALGAGRIFAQGAKLVDQALASGKIYDGDGFNYIKESFES 125

Query: 655 HTVHFIGLLSDGGVHSRADQL 717
            T+H IGLLSDGGVHSR DQL
Sbjct: 126 GTLHLIGLLSDGGVHSRLDQL 146

>sp|P35493|PMGI_RICCO 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
           (Phosphoglyceromutase) (BPG-independent PGAM) (PGAM-I)
           gi|1076562|pir||S49647 phosphoglycerate mutase (EC
           5.4.2.1), 2, 3-bisphosphoglycerate-independent - castor
           bean gi|474170|emb|CAA49995.1| phosphoglycerate mutase
           [Ricinus communis]
          Length = 556

 Score =  157 bits (396), Expect = 2e-37
 Identities = 78/141 (55%), Positives = 106/141 (74%), Gaps = 1/141 (0%)
 Frame = +1

Query: 298 YKLKAHPAIPAPEGPLLVCILDGFGENEYKDEFNAVHVAKTPTVDALR-AVPHRFRSIKA 474
           +KL  HP +P  +   +V +LDG+GE +  D++N +HVA+TPT+D+ +   P R+R IKA
Sbjct: 5   WKLADHPKLPKGKTIAMV-VLDGWGEAK-PDQYNCIHVAETPTMDSFKKTAPERWRLIKA 62

Query: 475 HGKAVGLPSDADMGNSEVGHNALGSGQVVDQGARLVDLALETGRMFSDPGWKLISEAFPS 654
           HG AVGLP++ DMGNSEVGHNALG+G++  QGA+LVDLAL +G+++   G+K + E F  
Sbjct: 63  HGTAVGLPTEDDMGNSEVGHNALGAGRIYAQGAKLVDLALASGKIYEGEGFKYVKECFDK 122

Query: 655 HTVHFIGLLSDGGVHSRADQL 717
            T+H IGLLSDGGVHSR DQL
Sbjct: 123 GTLHLIGLLSDGGVHSRLDQL 143

>emb|CAA06215.1| apgm [Malus x domestica]
          Length = 559

 Score =  156 bits (395), Expect = 3e-37
 Identities = 76/143 (53%), Positives = 110/143 (76%), Gaps = 2/143 (1%)
 Frame = +1

Query: 295 DYKLKAHPAIPAPEGPLL-VCILDGFGENEYKDEFNAVHVAKTPTVDALR-AVPHRFRSI 468
           D+KL  HP +P  +G ++ + +LDG+GE    D++N +HVA+TP +D+L+   P R+R +
Sbjct: 7   DWKLPDHPKLP--KGKVIGLIVLDGWGEAN-ADQYNCIHVAETPVMDSLKKGAPERWRLV 63

Query: 469 KAHGKAVGLPSDADMGNSEVGHNALGSGQVVDQGARLVDLALETGRMFSDPGWKLISEAF 648
           +AHG AVGLP++ DMGNSEVGHNALG+G++  QGA+LVD AL +G++F   G+K + E+F
Sbjct: 64  RAHGTAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDAALASGKIFEGEGFKYVKESF 123

Query: 649 PSHTVHFIGLLSDGGVHSRADQL 717
            ++T+H IGL+SDGGVHSR DQL
Sbjct: 124 ETNTLHLIGLMSDGGVHSRLDQL 146



EST assemble image


clone accession position
1 CM034f06_r AV388640 1 481
2 LCL076e03_r AV630273 229 631
3 HC021h02_r AV633529 244 718




Chlamydomonas reinhardtii
Kazusa DNA Research Institute