Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001284A_C01 KCC001284A_c01
(902 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF91445.1|AF281652_1 putative DNA binding protein [Atriplex ... 302 4e-81
ref|NP_850679.1| nuclear DNA-binding protein G2p -related [Arabi... 302 6e-81
ref|NP_190748.1| nuclear DNA-binding protein G2p -related [Arabi... 302 6e-81
gb|AAK25936.1|AF360226_1 putative nuclear DNA-binding protein G2... 301 1e-80
pir||T02069 probable DNA-binding protein GBP16 - rice gi|2511541... 301 1e-80
>gb|AAF91445.1|AF281652_1 putative DNA binding protein [Atriplex hortensis]
Length = 397
Score = 302 bits (774), Expect = 4e-81
Identities = 155/272 (56%), Positives = 204/272 (74%), Gaps = 3/272 (1%)
Frame = +2
Query: 38 MSDDGSIEHQEPNLSVPEVVTKYKAAADICNRALLAVVEAAKDGAKVVDLCRMGDQFINK 217
MSDD E +E +LS PEVVTKYK+AADI NRAL VV K AK+VDLC GD FI +
Sbjct: 1 MSDDER-EEKELDLSYPEVVTKYKSAADIVNRALQLVVGECKPKAKIVDLCEKGDNFIRE 59
Query: 218 ECANIYKG--KEIEKGVAFPTCVSANSIVGHFSPNSEDATALKNGDVVKIDMGCHIDGFI 391
+ N+YK K+IE+GVAFPTC+S N++V HFSP + D + L+ GD+VKIDMGCHIDGFI
Sbjct: 60 QTGNMYKNVKKKIERGVAFPTCLSINNVVCHFSPLASDDSVLEEGDLVKIDMGCHIDGFI 119
Query: 392 ATQATTIVVGDAAISGKAADVIAAARTAFDAAVRLIRPGKHIADVSAPL-QKVAESFGCN 568
A A T V+ + ++G+ ADV+AA TA + A+RL+RPGK+ + QK A ++ C
Sbjct: 120 AVVAHTHVIQEGPVTGRKADVLAATNTAAEVALRLVRPGKNQYRCNQKQSQKXAAAYDCK 179
Query: 569 LVEGVMSHEMKQFVIDGSKCILNKPTPDQKVEDGEFEENEVYAVDIVVSSGEGKPRVLDE 748
+VEGV+SH+MKQFVIDG+K +L+ +PD +V+D EFEENEVY+VDI S+GEGKPR+LDE
Sbjct: 180 IVEGVLSHQMKQFVIDGNKVVLSVSSPDVRVDDAEFEENEVYSVDIAASTGEGKPRMLDE 239
Query: 749 KETTVYKRALEVT*QLKMQASRAVFSLVNRGF 844
K+TT+YKRA++ LKM+ASR +FS +N+ F
Sbjct: 240 KQTTIYKRAVDKNYHLKMKASRFIFSEINQKF 271
>ref|NP_850679.1| nuclear DNA-binding protein G2p -related [Arabidopsis thaliana]
Length = 401
Score = 302 bits (773), Expect = 6e-81
Identities = 148/271 (54%), Positives = 204/271 (74%), Gaps = 2/271 (0%)
Frame = +2
Query: 38 MSDDGSIEHQEPNLSVPEVVTKYKAAADICNRALLAVVEAAKDGAKVVDLCRMGDQFINK 217
MS D + +E +L+ PEVVTKYK+AA+I N+AL V+ K AK+VD+C GD FI +
Sbjct: 1 MSSDDERDEKELSLTSPEVVTKYKSAAEIVNKALQVVLAECKPKAKIVDICEKGDSFIKE 60
Query: 218 ECANIYKG--KEIEKGVAFPTCVSANSIVGHFSPNSEDATALKNGDVVKIDMGCHIDGFI 391
+ A++YK K+IE+GVAFPTC+S N+ VGHFSP + D + L++GD+VKIDMGCHIDGFI
Sbjct: 61 QTASMYKNSKKKIERGVAFPTCISVNNTVGHFSPLASDESVLEDGDMVKIDMGCHIDGFI 120
Query: 392 ATQATTIVVGDAAISGKAADVIAAARTAFDAAVRLIRPGKHIADVSAPLQKVAESFGCNL 571
A T V+ + +SG+ ADVIAAA TA D A+RL+RPGK DV+ +QKVA ++ C +
Sbjct: 121 ALVGHTHVLQEGPLSGRKADVIAAANTAADVALRLVRPGKKNTDVTEAIQKVAAAYDCKI 180
Query: 572 VEGVMSHEMKQFVIDGSKCILNKPTPDQKVEDGEFEENEVYAVDIVVSSGEGKPRVLDEK 751
VEGV+SH++KQ VIDG+K +L+ +P+ V++ EFEENEVYA+DIV S+G+GKP++LDEK
Sbjct: 181 VEGVLSHQLKQHVIDGNKVVLSVSSPETTVDEVEFEENEVYAIDIVASTGDGKPKLLDEK 240
Query: 752 ETTVYKRALEVT*QLKMQASRAVFSLVNRGF 844
+TT+YK+ V QLKM+ASR + S + + F
Sbjct: 241 QTTIYKKDESVNYQLKMKASRFIISEIKQNF 271
>ref|NP_190748.1| nuclear DNA-binding protein G2p -related [Arabidopsis thaliana]
gi|11279169|pir||T51151 probable nuclear DNA-binding
protein G2p [imported] - Arabidopsis thaliana
gi|1657617|gb|AAB18127.1| G2p [Arabidopsis thaliana]
gi|3068707|gb|AAC14407.1| putative nuclear DNA-binding
protein G2p [Arabidopsis thaliana]
gi|21307811|gb|AAL25197.1| nuclear DNA-binding protein
[Arabidopsis thaliana] gi|21307813|gb|AAL25198.1|
nuclear DNA-binding protein [Arabidopsis thaliana]
gi|21311299|gb|AAM46648.1|AF422841_1 cell cycle-related
nuclear binding protein [Arabidopsis thaliana]
gi|23297076|gb|AAN13085.1| putative nuclear DNA-binding
protein G2p [Arabidopsis thaliana]
Length = 392
Score = 302 bits (773), Expect = 6e-81
Identities = 148/271 (54%), Positives = 204/271 (74%), Gaps = 2/271 (0%)
Frame = +2
Query: 38 MSDDGSIEHQEPNLSVPEVVTKYKAAADICNRALLAVVEAAKDGAKVVDLCRMGDQFINK 217
MS D + +E +L+ PEVVTKYK+AA+I N+AL V+ K AK+VD+C GD FI +
Sbjct: 1 MSSDDERDEKELSLTSPEVVTKYKSAAEIVNKALQVVLAECKPKAKIVDICEKGDSFIKE 60
Query: 218 ECANIYKG--KEIEKGVAFPTCVSANSIVGHFSPNSEDATALKNGDVVKIDMGCHIDGFI 391
+ A++YK K+IE+GVAFPTC+S N+ VGHFSP + D + L++GD+VKIDMGCHIDGFI
Sbjct: 61 QTASMYKNSKKKIERGVAFPTCISVNNTVGHFSPLASDESVLEDGDMVKIDMGCHIDGFI 120
Query: 392 ATQATTIVVGDAAISGKAADVIAAARTAFDAAVRLIRPGKHIADVSAPLQKVAESFGCNL 571
A T V+ + +SG+ ADVIAAA TA D A+RL+RPGK DV+ +QKVA ++ C +
Sbjct: 121 ALVGHTHVLQEGPLSGRKADVIAAANTAADVALRLVRPGKKNTDVTEAIQKVAAAYDCKI 180
Query: 572 VEGVMSHEMKQFVIDGSKCILNKPTPDQKVEDGEFEENEVYAVDIVVSSGEGKPRVLDEK 751
VEGV+SH++KQ VIDG+K +L+ +P+ V++ EFEENEVYA+DIV S+G+GKP++LDEK
Sbjct: 181 VEGVLSHQLKQHVIDGNKVVLSVSSPETTVDEVEFEENEVYAIDIVASTGDGKPKLLDEK 240
Query: 752 ETTVYKRALEVT*QLKMQASRAVFSLVNRGF 844
+TT+YK+ V QLKM+ASR + S + + F
Sbjct: 241 QTTIYKKDESVNYQLKMKASRFIISEIKQNF 271
>gb|AAK25936.1|AF360226_1 putative nuclear DNA-binding protein G2p [Arabidopsis thaliana]
gi|14532886|gb|AAK64125.1| putative nuclear DNA-binding
protein G2p [Arabidopsis thaliana]
Length = 392
Score = 301 bits (771), Expect = 1e-80
Identities = 148/271 (54%), Positives = 204/271 (74%), Gaps = 2/271 (0%)
Frame = +2
Query: 38 MSDDGSIEHQEPNLSVPEVVTKYKAAADICNRALLAVVEAAKDGAKVVDLCRMGDQFINK 217
MS D + +E +L+ PEVVTKYK+AA+I N+AL V+ K AK+VD+C GD FI +
Sbjct: 1 MSSDDERDEKELSLTSPEVVTKYKSAAEIVNKALQVVLAECKPKAKIVDICDKGDSFIKE 60
Query: 218 ECANIYKG--KEIEKGVAFPTCVSANSIVGHFSPNSEDATALKNGDVVKIDMGCHIDGFI 391
+ A++YK K+IE+GVAFPTC+S N+ VGHFSP + D + L++GD+VKIDMGCHIDGFI
Sbjct: 61 QTASMYKNSKKKIERGVAFPTCISVNNTVGHFSPLASDESVLEDGDMVKIDMGCHIDGFI 120
Query: 392 ATQATTIVVGDAAISGKAADVIAAARTAFDAAVRLIRPGKHIADVSAPLQKVAESFGCNL 571
A T V+ + +SG+ ADVIAAA TA D A+RL+RPGK DV+ +QKVA ++ C +
Sbjct: 121 ALVGHTHVLQEGPLSGRKADVIAAANTAADVALRLVRPGKKNTDVTEAIQKVAAAYDCKI 180
Query: 572 VEGVMSHEMKQFVIDGSKCILNKPTPDQKVEDGEFEENEVYAVDIVVSSGEGKPRVLDEK 751
VEGV+SH++KQ VIDG+K +L+ +P+ V++ EFEENEVYA+DIV S+G+GKP++LDEK
Sbjct: 181 VEGVLSHQLKQHVIDGNKVVLSVSSPETTVDEVEFEENEVYAIDIVASTGDGKPKLLDEK 240
Query: 752 ETTVYKRALEVT*QLKMQASRAVFSLVNRGF 844
+TT+YK+ V QLKM+ASR + S + + F
Sbjct: 241 QTTIYKKDESVNYQLKMKASRFIISEIKQNF 271
>pir||T02069 probable DNA-binding protein GBP16 - rice gi|2511541|gb|AAB80919.1|
DNA-binding protein GBP16 [Oryza sativa]
Length = 393
Score = 301 bits (770), Expect = 1e-80
Identities = 153/270 (56%), Positives = 199/270 (73%), Gaps = 2/270 (0%)
Frame = +2
Query: 41 SDDGSIEHQEPNLSVPEVVTKYKAAADICNRALLAVVEAAKDGAKVVDLCRMGDQFINKE 220
SDD E +E +LS +VVTKYK AADI N AL VV K AK+VD+C GD +I ++
Sbjct: 3 SDDEVREEKELDLSSSDVVTKYKDAADIINNALKLVVSLCKPKAKIVDICEKGDSYIREQ 62
Query: 221 CANIYKG--KEIEKGVAFPTCVSANSIVGHFSPNSEDATALKNGDVVKIDMGCHIDGFIA 394
NIYK ++IE+GVAFPTCVS N+ V HFSP + D L+ D+VKIDMGCHIDGFIA
Sbjct: 63 TGNIYKNVKRKIERGVAFPTCVSVNNTVCHFSPLATDEAVLEENDMVKIDMGCHIDGFIA 122
Query: 395 TQATTIVVGDAAISGKAADVIAAARTAFDAAVRLIRPGKHIADVSAPLQKVAESFGCNLV 574
A T V+ D A++GKAADV+AAA TA + A+R +RPGK DV+ +QKVA ++ V
Sbjct: 123 VVAHTHVIHDGAVTGKAADVLAAANTAAEVALRFVRPGKKNKDVTEAIQKVAAAYDSVSV 182
Query: 575 EGVMSHEMKQFVIDGSKCILNKPTPDQKVEDGEFEENEVYAVDIVVSSGEGKPRVLDEKE 754
EGV+SH++KQFVIDG+K +L+ D KV+D EFEENEVYA+DIV S+GEGKP++LDEK+
Sbjct: 183 EGVLSHQLKQFVIDGNKVVLSVSNADTKVDDAEFEENEVYAIDIVTSTGEGKPKLLDEKQ 242
Query: 755 TTVYKRALEVT*QLKMQASRAVFSLVNRGF 844
TT+YKRA++ LKM+ASR +FS +++ F
Sbjct: 243 TTIYKRAVDKNYHLKMKASRFIFSEISQKF 272
