Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001271A_C01 KCC001271A_c01
(561 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566627.1| expressed protein [Arabidopsis thaliana] gi|166... 54 1e-06
ref|XP_210394.1| similar to Contains similarity to extensin (atE... 38 0.082
ref|ZP_00045370.1| COG1033: Predicted exporters of the RND super... 37 0.14
emb|CAD20479.1| alpha adrenergic receptor 2B [Tamandua tetradact... 37 0.14
emb|CAA88882.4| C. elegans TOH-1 protein (corresponding sequence... 36 0.41
>ref|NP_566627.1| expressed protein [Arabidopsis thaliana] gi|16649111|gb|AAL24407.1|
Unknown protein [Arabidopsis thaliana]
gi|20148555|gb|AAM10168.1| unknown protein [Arabidopsis
thaliana]
Length = 187
Score = 54.3 bits (129), Expect = 1e-06
Identities = 41/167 (24%), Positives = 72/167 (42%), Gaps = 11/167 (6%)
Frame = +2
Query: 92 PLLQLPGLNQTGTYNMSHQLLGRVSVAPGSTVPRAAFRPNRPMRRPRSRDIVVAFLDDHK 271
PL+ LP L ++ + + + G +PR A + RSRD+ VA + +
Sbjct: 15 PLVFLPRLPSR---SLRCRAAADIPLGDGIRLPREA---DSTSDTARSRDVSVAAGGNGE 68
Query: 272 GHK-----------GDHHTYHSQDPLSVHLFMPYKHLPADGLVCQPEEAACDPSERNCKS 418
G K G+ + D L + + P + ++ CDP +C+
Sbjct: 69 GAKWRKRRLLWSKSGESYLVDDGDALPLPMTYPDTSPVSPDVI--DRRLQCDPVVEDCRE 126
Query: 419 VIYTYEAKCYACYGTGFVKGHSNGRRASLSMCMVCLGLGYVRHTTAR 559
V+Y + KC +C G+G V + + + C+ C G+GYV+ T+R
Sbjct: 127 VVYEWTGKCRSCQGSGTVSYYKKRGKEVICKCIPCQGIGYVQKITSR 173
>ref|XP_210394.1| similar to Contains similarity to extensin (atExt1) from
Arabidopsis thaliana gb|U43627 and is rich in proline
and glycine. EST gb|Z37262 comes from this gene [Homo
sapiens]
Length = 394
Score = 38.1 bits (87), Expect = 0.082
Identities = 29/86 (33%), Positives = 32/86 (36%)
Frame = -2
Query: 407 CAQRGHMQPLQVGIPDRPPAGACRA*RDVPRGGPGCGRCGGHPCGLCGHPGTQPRCHENE 228
CA R P + R P AC A VP P C R CG G P P C +
Sbjct: 13 CASRAPCVPAEPPACLRNPLRACGA-PCVPAEPPACQRSPLRACGAPGVPAEPPACLRSP 71
Query: 227 AGASAD*AGMPLLVPCCPALPTRGRG 150
AS G+P P C P R G
Sbjct: 72 LRASGA-PGVPAEPPACQRNPLRASG 96
Score = 35.0 bits (79), Expect = 0.69
Identities = 27/79 (34%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Frame = -2
Query: 368 IPDRPPA------GACRA*RDVPRGGPGCGRCGGHPCGLCGHPGTQPRCHENEAGASAD* 207
+P PPA AC A VP P C R G G P P C N AS
Sbjct: 227 VPAEPPACQGSPLRACGA-PGVPAEPPACQRSPRRASGAPGVPAEPPACQRNPLRASGT- 284
Query: 206 AGMPLLVPCCPALPTRGRG 150
G+P P C P R G
Sbjct: 285 PGVPAEPPACLRNPLRASG 303
>ref|ZP_00045370.1| COG1033: Predicted exporters of the RND superfamily [Magnetococcus
sp. MC-1]
Length = 764
Score = 37.4 bits (85), Expect = 0.14
Identities = 28/111 (25%), Positives = 45/111 (40%)
Frame = -3
Query: 457 IAGITLRLIRVDDGLAIALRGVTCSLFRLAYQTVRRQVLVGHKEMYREGVLAVVGVVVTL 278
+ G T+ L + + IALR V L L V + G M V + VV +
Sbjct: 606 LGGTTVALFLISLSMIIALRSVKLGLLSLIPNLVPAGIAFGLWGMINGQVGLALSVVTGM 665
Query: 277 VAFVVIQERNHDVTRTRPAHRPIRPECRSWYRAARRYRHAAEELVRHIISS 125
+++ + H +++ + RA R Y H AEE VR+ S+
Sbjct: 666 TLGIIVDDTVHFLSK--------------YLRARREYHHTAEEAVRYAFST 702
>emb|CAD20479.1| alpha adrenergic receptor 2B [Tamandua tetradactyla]
Length = 373
Score = 37.4 bits (85), Expect = 0.14
Identities = 36/96 (37%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Frame = -2
Query: 365 PDRPPAGACRA*RDVPRGGPG--CGRCGGHPCGLCGHPGTQPRCHENEAGASAD*AGMPL 192
P PPAGA + P G PG GHP PG E G AD AG
Sbjct: 208 PRPPPAGAPASAMPPPLGSPGTTAREAIGHP----EAPG-----ENEEGGIPADPAGQ-A 257
Query: 191 LVPCCPALPTRGRGVGATYYKFRFDLVLGAGAKEEE 84
L P PALP G+ G D LGA A+E+E
Sbjct: 258 LPPGWPALPDSGQSPG--------DGALGAAAEEDE 285
>emb|CAA88882.4| C. elegans TOH-1 protein (corresponding sequence T24A11.3)
[Caenorhabditis elegans]
Length = 414
Score = 35.8 bits (81), Expect = 0.41
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = -2
Query: 407 CAQRGHMQPLQVGIPDRPPAGACRA*RDVPRGGPGCGRCGGHPCG 273
C R H+ L G PD CR + GGP CGR PCG
Sbjct: 267 CQGRNHLNCLAGGYPDPNNCNVCRCPEGL--GGPDCGRLQPSPCG 309
