KCC001270A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001270A_C01 KCC001270A_c01
CTAGGACTGTTTTTCTTACAGACACCAGGAAAATGATGCGCCTTGCTGCTCAGCGTAGCC
GGGGCCTGCTGGCGCCCGGCGCTCGCTTCCTCCGAACCTCGGCGGCGTCTGCTGAGGAGA
GCTCGGTCGCCAACCTGGTGAAGTCGGTCAGTGAGACCTCGGGTGCCAACTTGCTGGCGA
GCCTGAAGGCGGAGCAGGCGAAGCTGAAGCCATTCTACCCGGAGCCCGCAGCAGCGGCTG
GCTGGTCGCTGCAGGCGCGTGTGGCTGTCCTGGGTCTGATCTCATGGACGCTATACCGCC
TGGACACCCAGGCCCGCGCGCACGAGTGGATTGTCGACCTGTCGCTGGACGTGCTCCAGG
CGGCATGGTACGTGTCTTTCCTGTCGCTCATCCCCTTCCGCTCCGTCTTCGTGGCGCTGC
GCGGTATGGCTCCCGCCACCGCCGCTCCCTTCAACGGTCTGCGCAGCGCTGTGGCGCTGA
AGCCGTAAGCAGCGGGTCCCAGCAATTCAAATAAGCGCTCGACTGTCTGCGGATGGCGGA
GC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001270A_C01 KCC001270A_c01
         (542 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_036764.1| proline-rich protein 15; Proline-rich protein, ...    56  4e-07
pir||C29149 proline-rich protein - mouse (fragment) gi|200545|gb...    55  6e-07
ref|XP_237701.1| hypothetical protein XP_237701 [Rattus norvegicus]    54  1e-06
pir||A24264 proline-rich protein MP2 - mouse (fragment)                54  1e-06
ref|NP_062603.1| proline-rich protein 15; proline-rich salivary ...    54  2e-06

>ref|NP_036764.1| proline-rich protein 15; Proline-rich protein, salivary [Rattus
           norvegicus] gi|92651|pir||A30496 proline-rich protein 13
           - rat gi|206710|gb|AAA42063.1| salivary proline-rich
           protein
          Length = 164

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 38/118 (32%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
 Frame = -3

Query: 387 ATGKTRTMPPGARPATGR-QSTRARGPGCPGGIASMRSDPGQPHAPAATSQPLLRAPGRM 211
           A G  +  PP   P     Q  + +GP  PGG       PG+P  P     P  + P   
Sbjct: 43  ANGSQQGPPPQGGPQQKPPQPGKPQGPPPPGGPQQKPPQPGKPQGPPPPGGPQQKPPQPG 102

Query: 210 ASASPAPPSGSPASWHPRSH*PTSPGWRPSSPQQTPPRFGGSERRAPAGPGYAEQQGA 37
               P PP G P    P+S  P  P   P  PQQ PP+  G+++  P GP +   QG+
Sbjct: 103 NQQGP-PPPGGPQQKPPQSGKPQGPP-PPGGPQQRPPQ-PGNQQSPPQGPQFGRPQGS 157

>pir||C29149 proline-rich protein - mouse (fragment) gi|200545|gb|AAA40003.1|
           proline-rich salivary protein
          Length = 227

 Score = 55.1 bits (131), Expect = 6e-07
 Identities = 42/125 (33%), Positives = 48/125 (37%), Gaps = 7/125 (5%)
 Frame = -3

Query: 414 PRRRSGRG*ATGKTRTMPPGARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQP 235
           PR   G     G  +  P G  P  G Q    +GP  PGG       P  P  P     P
Sbjct: 88  PRPPQGPPPPGGPQQRPPQGPPPPGGPQPRPPQGPPPPGG-----PQPRPPQGPPPPGGP 142

Query: 234 LLR---APGRMASASPAPPSGSPASWHPRSH*PTSPGWRPSSPQ----QTPPRFGGSERR 76
            LR    P   A   P PP G P    P+   P  P   P+ PQ    Q PP  GG ++R
Sbjct: 143 QLRPPQGPPPPAGPQPRPPQGPPPPAGPQPRPPQGPP--PTGPQPRPTQGPPPTGGPQQR 200

Query: 75  APAGP 61
            P GP
Sbjct: 201 PPQGP 205

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 34/101 (33%), Positives = 37/101 (35%)
 Frame = -3

Query: 363 PPGARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQPLLRAPGRMASASPAPPS 184
           P G  P  G Q    +GP  PGG       P  P  P     P  R P         PP 
Sbjct: 63  PQGPPPPGGPQPRPPQGPPPPGG-----PQPRPPQGPPPPGGPQQRPP------QGPPPP 111

Query: 183 GSPASWHPRSH*PTSPGWRPSSPQQTPPRFGGSERRAPAGP 61
           G P    P+   P  PG     P Q PP  GG + R P GP
Sbjct: 112 GGPQPRPPQG--PPPPGGPQPRPPQGPPPPGGPQLRPPQGP 150

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 37/122 (30%), Positives = 43/122 (34%), Gaps = 4/122 (3%)
 Frame = -3

Query: 414 PRRRSGRG*ATGKTRTMPPGARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQP 235
           PR   G     G     P G  P  G Q    +GP  PGG    +  P  P  P      
Sbjct: 60  PRPPQGPPPPGGPQPRPPQGPPPPGGPQPRPPQGPPPPGG--PQQRPPQGPPPPGGPQPR 117

Query: 234 LLRAPGRMASASPAPPSGSPASWHPRSH*PTSP----GWRPSSPQQTPPRFGGSERRAPA 67
             + P       P PP G P    P+   P  P    G +P  PQ  PP   G + R P 
Sbjct: 118 PPQGPPPPGGPQPRPPQGPPPPGGPQLRPPQGPPPPAGPQPRPPQGPPPP-AGPQPRPPQ 176

Query: 66  GP 61
           GP
Sbjct: 177 GP 178

 Score = 42.0 bits (97), Expect = 0.005
 Identities = 33/104 (31%), Positives = 39/104 (36%)
 Frame = -3

Query: 372 RTMPPGARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQPLLRAPGRMASASPA 193
           R  P G +P      ++ +GP  PGG       P  P  P     P  R P         
Sbjct: 33  RPPPSGFQPRPPVNGSQ-QGPPPPGG-----PQPRPPQGPPPPGGPQPRPP------QGP 80

Query: 192 PPSGSPASWHPRSH*PTSPGWRPSSPQQTPPRFGGSERRAPAGP 61
           PP G P    P+   P  PG     P Q PP  GG + R P GP
Sbjct: 81  PPPGGPQPRPPQG--PPPPGGPQQRPPQGPPPPGGPQPRPPQGP 122

 Score = 40.0 bits (92), Expect = 0.020
 Identities = 30/84 (35%), Positives = 35/84 (40%), Gaps = 6/84 (7%)
 Frame = -3

Query: 294 IASMRSDPG--QPHAPAATSQPLLRAPGRMASASPAPPSGSPASWHPRSH*PTSP----G 133
           I + R  P   QP  P   SQ     PG      P PP G P    P+   P  P    G
Sbjct: 29  IPNQRPPPSGFQPRPPVNGSQQGPPPPG---GPQPRPPQGPPPPGGPQPRPPQGPPPPGG 85

Query: 132 WRPSSPQQTPPRFGGSERRAPAGP 61
            +P  PQ  PP  GG ++R P GP
Sbjct: 86  PQPRPPQGPPPP-GGPQQRPPQGP 108

>ref|XP_237701.1| hypothetical protein XP_237701 [Rattus norvegicus]
          Length = 164

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 35/109 (32%), Positives = 45/109 (41%)
 Frame = -3

Query: 363 PPGARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQPLLRAPGRMASASPAPPS 184
           PPG       Q  + +GP  PGG       PG+P  P     P  + P       P PP 
Sbjct: 52  PPGGPQQKPPQPEKPQGPPPPGGPQQKPPQPGKPQGPPPPGGPQQKQPQPGKPQGP-PPP 110

Query: 183 GSPASWHPRSH*PTSPGWRPSSPQQTPPRFGGSERRAPAGPGYAEQQGA 37
           G P    P+   P  P   P  PQQ PP+  G+++  P GP     QG+
Sbjct: 111 GGPQQKPPQPGKPQDPP-PPGGPQQRPPQ-PGNQQSPPQGPQLDRPQGS 157

 Score = 45.8 bits (107), Expect = 4e-04
 Identities = 35/110 (31%), Positives = 42/110 (37%), Gaps = 3/110 (2%)
 Frame = -3

Query: 384 TGKTRTMPPG---ARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQPLLRAPGR 214
           T   +  PPG     PA G Q    +GP  PGG       P +P  P     P  + P  
Sbjct: 27  TPNQKPPPPGFPPRPPANGSQ----QGPPPPGGPQQKPPQPEKPQGPPPPGGPQQKPPQP 82

Query: 213 MASASPAPPSGSPASWHPRSH*PTSPGWRPSSPQQTPPRFGGSERRAPAG 64
                P PP G P    P+   P  P   P  PQQ PP+ G  +   P G
Sbjct: 83  GKPQGP-PPPGGPQQKQPQPGKPQGPP-PPGGPQQKPPQPGKPQDPPPPG 130

>pir||A24264 proline-rich protein MP2 - mouse (fragment)
          Length = 240

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 42/124 (33%), Positives = 47/124 (37%), Gaps = 6/124 (4%)
 Frame = -3

Query: 414 PRRRSGRG*ATGKTRTMPPGARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQP 235
           PR   G     G     P G  P  G Q    +GP  PGG       P  P  P     P
Sbjct: 67  PRPPQGPPPPGGPQPRPPQGPPPPGGPQQRPPQGPPPPGG-----PQPRPPQGPPPPGGP 121

Query: 234 LLR---APGRMASASPAPPSGSPASWHPRSH*PTSP---GWRPSSPQQTPPRFGGSERRA 73
            LR    P   A   P PP G P    P+   P  P   G +P  P Q PP  GG ++R 
Sbjct: 122 QLRPPQGPPPPAGPQPRPPQGPPPPAGPQPRPPQGPPTTGPQPR-PTQGPPPTGGPQQRP 180

Query: 72  PAGP 61
           P GP
Sbjct: 181 PQGP 184

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 42/121 (34%), Positives = 49/121 (39%), Gaps = 3/121 (2%)
 Frame = -3

Query: 414 PRRRSGRG*ATGKTRTMPPGARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQP 235
           PR   G     G  +  P G  P  G Q    +GP  PGG   +R   G P  P A  QP
Sbjct: 81  PRPPQGPPPPGGPQQRPPQGPPPPGGPQPRPPQGPPPPGG-PQLRPPQGPP--PPAGPQP 137

Query: 234 LL-RAPGRMASASPAPPSGSPASW-HPR-SH*PTSPGWRPSSPQQTPPRFGGSERRAPAG 64
              + P   A   P PP G P +   PR +  P   G     P Q PP  GG + R P G
Sbjct: 138 RPPQGPPPPAGPQPRPPQGPPTTGPQPRPTQGPPPTGGPQQRPPQGPPPPGGPQPRPPQG 197

Query: 63  P 61
           P
Sbjct: 198 P 198

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 34/101 (33%), Positives = 37/101 (35%)
 Frame = -3

Query: 363 PPGARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQPLLRAPGRMASASPAPPS 184
           P G  P  G Q    +GP  PGG       P  P  P     P  R P         PP 
Sbjct: 42  PQGPPPPGGPQPRPPQGPPPPGG-----PQPRPPQGPPPPGGPQPRPP------QGPPPP 90

Query: 183 GSPASWHPRSH*PTSPGWRPSSPQQTPPRFGGSERRAPAGP 61
           G P    P+   P  PG     P Q PP  GG + R P GP
Sbjct: 91  GGPQQRPPQG--PPPPGGPQPRPPQGPPPPGGPQLRPPQGP 129

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 38/122 (31%), Positives = 43/122 (35%), Gaps = 4/122 (3%)
 Frame = -3

Query: 414 PRRRSGRG*ATGKTRTMPPGARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQP 235
           PR   G     G     P G  P  G Q    +GP  PGG       P  P  P    Q 
Sbjct: 39  PRPPQGPPPPGGPQPRPPQGPPPPGGPQPRPPQGPPPPGG--PQPRPPQGPPPPGGPQQR 96

Query: 234 LLRAPGRMASASPAPPSGSPASWHPRSH*PTSP----GWRPSSPQQTPPRFGGSERRAPA 67
             + P       P PP G P    P+   P  P    G +P  PQ  PP   G + R P 
Sbjct: 97  PPQGPPPPGGPQPRPPQGPPPPGGPQLRPPQGPPPPAGPQPRPPQGPPPP-AGPQPRPPQ 155

Query: 66  GP 61
           GP
Sbjct: 156 GP 157

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 33/104 (31%), Positives = 40/104 (37%)
 Frame = -3

Query: 372 RTMPPGARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQPLLRAPGRMASASPA 193
           R  P G +P      ++ +GP  PGG       P  P  P     P  R P         
Sbjct: 12  RPPPSGFQPRPPVNGSQ-QGPPPPGG-----PQPRPPQGPPPPGGPQPRPP------QGP 59

Query: 192 PPSGSPASWHPRSH*PTSPGWRPSSPQQTPPRFGGSERRAPAGP 61
           PP G P    P+   P  PG     P Q PP  GG ++R P GP
Sbjct: 60  PPPGGPQPRPPQG--PPPPGGPQPRPPQGPPPPGGPQQRPPQGP 101

 Score = 42.4 bits (98), Expect = 0.004
 Identities = 39/135 (28%), Positives = 44/135 (31%), Gaps = 10/135 (7%)
 Frame = -3

Query: 414 PRRRSGRG*ATGKTRTMPPGARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQP 235
           PR   G     G     P G  P  G Q    +GP  P G       P  P  P  T   
Sbjct: 109 PRPPQGPPPPGGPQLRPPQGPPPPAGPQPRPPQGPPPPAG-----PQPRPPQGPPTTGPQ 163

Query: 234 LLRAPGRMASASPA--PPSGSPASWHPRSH*PTSP---GWRPSSPQQTPPRFGGSERRAP 70
                G   +  P   PP G P    P+   P  P   G    SP Q PP  GG ++  P
Sbjct: 164 PRPTQGPPPTGGPQQRPPQGPPPPGGPQPRPPQGPPPPGGPQPSPTQGPPPTGGPQQTPP 223

Query: 69  -----AGPGYAEQQG 40
                 GP     QG
Sbjct: 224 LAGNTQGPPPGRPQG 238

>ref|NP_062603.1| proline-rich protein 15; proline-rich salivary protein;
           proline-rich protein B, salivary [Mus musculus]
           gi|91204|pir||A29149 proline-rich protein - mouse
           gi|200539|gb|AAA40000.1| 15-kDa proline-rich salivary
           protein
          Length = 147

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 39/119 (32%), Positives = 50/119 (41%), Gaps = 3/119 (2%)
 Frame = -3

Query: 384 TGKTRTMPPG---ARPATGRQSTRARGPGCPGGIASMRSDPGQPHAPAATSQPLLRAPGR 214
           T   +  PPG     PA G Q    +GP   GG       PG+P  P     P  + P  
Sbjct: 29  TPNQKPPPPGFPPRPPANGSQ----QGPPPQGGPQQKPPQPGKPQGPPPPGGPQQKPPQP 84

Query: 213 MASASPAPPSGSPASWHPRSH*PTSPGWRPSSPQQTPPRFGGSERRAPAGPGYAEQQGA 37
                P PP G P    P+S  P  P   P  PQQ PP+  G+++  P GP +   QG+
Sbjct: 85  GNQQGP-PPPGGPQQKPPQSGKPQGPP-PPGGPQQRPPQ-PGNQQSPPQGPQFGRPQGS 140



EST assemble image


clone accession position
1 MX006d03_r BP086313 1 600
2 CM032b02_r AV388476 93 433
3 HC058g12_r AV636386 95 540
4 LC028h08_r AV620942 97 631
5 MX005d06_r BP086269 104 484
6 HC051g09_r AV635850 118 638
7 HC052d09_r AV635899 118 611
8 CM040e03_r AV389161 118 645
9 MX247d08_r BP091963 118 605
10 CM039h02_r AV388942 118 470
11 MX212c12_r BP089692 118 418
12 HC017e06_r AV633163 122 622
13 MX236h12_r BP091324 132 383




Chlamydomonas reinhardtii
Kazusa DNA Research Institute