Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001268A_C01 KCC001268A_c01
(542 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T51343 RNA helicase RH15 [imported] - Arabidopsis thaliana ... 194 5e-49
ref|NP_568245.1| DEAD/DEAH box helicase, putative [Arabidopsis t... 194 5e-49
ref|NP_568244.1| DEAD/DEAH box helicase, putative [Arabidopsis t... 194 5e-49
emb|CAB96655.1| DEAD BOX RNA helicase RH15 [Arabidopsis thaliana] 194 5e-49
emb|CAB96652.1| DEAD BOX RNA helicase RH15-like protein [Arabido... 194 5e-49
>pir||T51343 RNA helicase RH15 [imported] - Arabidopsis thaliana (fragment)
gi|3776005|emb|CAA09205.1| RNA helicase [Arabidopsis
thaliana]
Length = 451
Score = 194 bits (494), Expect = 5e-49
Identities = 93/147 (63%), Positives = 114/147 (77%), Gaps = 2/147 (1%)
Frame = +3
Query: 102 ANEEELLDYEEDDVAEAEAVGKAGQE--KKGYVGIHATGFKELMLKPELLQAIADCGFEH 275
A EEELLDYEE+D ++ K E KKGYVGIH++GF++ +LKPELL+AI D GFEH
Sbjct: 33 AYEEELLDYEEEDEKVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 92
Query: 276 PSEVQHECIPHAILGNDVLCQAKSGMGKTAVFVLSILQQLDPKANECHAIILCHTRELAF 455
PSEVQHECIP AILG DV+CQAKSGMGKTAVFVLS LQQ++P + A++LCHTRELA+
Sbjct: 93 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAY 152
Query: 456 QICHEFTRFSARMKGVTIGNFYGGIPV 536
QIC+EF RFS + + FYGG+ +
Sbjct: 153 QICNEFVRFSTYLPDTKVSVFYGGVNI 179
>ref|NP_568245.1| DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
gi|14190381|gb|AAK55671.1|AF378868_1 AT5g11200/F2I11_90
[Arabidopsis thaliana] gi|15450405|gb|AAK96496.1|
AT5g11170/F2I11_60 [Arabidopsis thaliana]
gi|16323360|gb|AAL15393.1| AT5g11200/F2I11_90
[Arabidopsis thaliana] gi|24111365|gb|AAN46806.1|
At5g11170/F2I11_60 [Arabidopsis thaliana]
Length = 427
Score = 194 bits (494), Expect = 5e-49
Identities = 93/147 (63%), Positives = 114/147 (77%), Gaps = 2/147 (1%)
Frame = +3
Query: 102 ANEEELLDYEEDDVAEAEAVGKAGQE--KKGYVGIHATGFKELMLKPELLQAIADCGFEH 275
A EEELLDYEE+D ++ K E KKGYVGIH++GF++ +LKPELL+AI D GFEH
Sbjct: 9 AYEEELLDYEEEDEKVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
Query: 276 PSEVQHECIPHAILGNDVLCQAKSGMGKTAVFVLSILQQLDPKANECHAIILCHTRELAF 455
PSEVQHECIP AILG DV+CQAKSGMGKTAVFVLS LQQ++P + A++LCHTRELA+
Sbjct: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAY 128
Query: 456 QICHEFTRFSARMKGVTIGNFYGGIPV 536
QIC+EF RFS + + FYGG+ +
Sbjct: 129 QICNEFVRFSTYLPDTKVSVFYGGVNI 155
>ref|NP_568244.1| DEAD/DEAH box helicase, putative [Arabidopsis thaliana]
Length = 427
Score = 194 bits (494), Expect = 5e-49
Identities = 93/147 (63%), Positives = 114/147 (77%), Gaps = 2/147 (1%)
Frame = +3
Query: 102 ANEEELLDYEEDDVAEAEAVGKAGQE--KKGYVGIHATGFKELMLKPELLQAIADCGFEH 275
A EEELLDYEE+D ++ K E KKGYVGIH++GF++ +LKPELL+AI D GFEH
Sbjct: 9 AYEEELLDYEEEDEKVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
Query: 276 PSEVQHECIPHAILGNDVLCQAKSGMGKTAVFVLSILQQLDPKANECHAIILCHTRELAF 455
PSEVQHECIP AILG DV+CQAKSGMGKTAVFVLS LQQ++P + A++LCHTRELA+
Sbjct: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAY 128
Query: 456 QICHEFTRFSARMKGVTIGNFYGGIPV 536
QIC+EF RFS + + FYGG+ +
Sbjct: 129 QICNEFVRFSTYLPDTKVSVFYGGVNI 155
>emb|CAB96655.1| DEAD BOX RNA helicase RH15 [Arabidopsis thaliana]
Length = 427
Score = 194 bits (494), Expect = 5e-49
Identities = 93/147 (63%), Positives = 114/147 (77%), Gaps = 2/147 (1%)
Frame = +3
Query: 102 ANEEELLDYEEDDVAEAEAVGKAGQE--KKGYVGIHATGFKELMLKPELLQAIADCGFEH 275
A EEELLDYEE+D ++ K E KKGYVGIH++GF++ +LKPELL+AI D GFEH
Sbjct: 9 AYEEELLDYEEEDEKVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
Query: 276 PSEVQHECIPHAILGNDVLCQAKSGMGKTAVFVLSILQQLDPKANECHAIILCHTRELAF 455
PSEVQHECIP AILG DV+CQAKSGMGKTAVFVLS LQQ++P + A++LCHTRELA+
Sbjct: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAY 128
Query: 456 QICHEFTRFSARMKGVTIGNFYGGIPV 536
QIC+EF RFS + + FYGG+ +
Sbjct: 129 QICNEFVRFSTYLPDTKVSVFYGGVNI 155
>emb|CAB96652.1| DEAD BOX RNA helicase RH15-like protein [Arabidopsis thaliana]
Length = 435
Score = 194 bits (494), Expect = 5e-49
Identities = 93/147 (63%), Positives = 114/147 (77%), Gaps = 2/147 (1%)
Frame = +3
Query: 102 ANEEELLDYEEDDVAEAEAVGKAGQE--KKGYVGIHATGFKELMLKPELLQAIADCGFEH 275
A EEELLDYEE+D ++ K E KKGYVGIH++GF++ +LKPELL+AI D GFEH
Sbjct: 9 AYEEELLDYEEEDEKVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEH 68
Query: 276 PSEVQHECIPHAILGNDVLCQAKSGMGKTAVFVLSILQQLDPKANECHAIILCHTRELAF 455
PSEVQHECIP AILG DV+CQAKSGMGKTAVFVLS LQQ++P + A++LCHTRELA+
Sbjct: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAY 128
Query: 456 QICHEFTRFSARMKGVTIGNFYGGIPV 536
QIC+EF RFS + + FYGG+ +
Sbjct: 129 QICNEFVRFSTYLPDTKVSVFYGGVNI 155
