Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001267A_C01 KCC001267A_c01
(940 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE01514.1| OJ991214_12.3 [Oryza sativa (japonica cultivar-g... 85 2e-15
emb|CAB75430.1| putative 16kDa membrane protein [Nicotiana tabacum] 80 4e-14
gb|AAM97011.1| expressed protein [Arabidopsis thaliana] gi|23197... 78 2e-13
ref|NP_563815.1| expressed protein [Arabidopsis thaliana] gi|152... 78 2e-13
ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca] 32 0.013
>emb|CAE01514.1| OJ991214_12.3 [Oryza sativa (japonica cultivar-group)]
Length = 142
Score = 85.1 bits (209), Expect = 2e-15
Identities = 51/117 (43%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Frame = +2
Query: 80 ARASPAAAPLVVRAEASN-----KSFPRDWVKTDPLGPRPGLRWLDHPRPTSACLPSAAS 244
AR S A PL+ R N +FP+DW++ D GL P A ++ +
Sbjct: 28 ARVS-ARNPLLTRNLERNGRITCMTFPQDWLRRDLNVIGFGLIGWIAPSSVPAINGNSLT 86
Query: 245 PWFGLFTQSIGENLAHFPTGPALDDKFWLYLITYHLGLFLTITLGQIGVQGRKQGYW 415
GLF SIG+ L+HFP+ PALD FWL+L+T+HLGLFL +T GQIG +GR +GY+
Sbjct: 87 ---GLFFSSIGQELSHFPSPPALDSPFWLWLVTWHLGLFLALTFGQIGFKGRTEGYF 140
>emb|CAB75430.1| putative 16kDa membrane protein [Nicotiana tabacum]
Length = 143
Score = 80.5 bits (197), Expect = 4e-14
Identities = 51/115 (44%), Positives = 68/115 (58%), Gaps = 6/115 (5%)
Frame = +2
Query: 89 SPAAA--PLVVRAEASNK---SFPRDWVKTDPLGPRPGL-RWLDHPRPTSACLPSAASPW 250
SP A PL V + K +F RDW++ D GL WL P+S + + S
Sbjct: 31 SPVTARNPLRVAQASGGKFTCNFQRDWLRRDLNVIGFGLIGWL---APSSIPVINGKS-L 86
Query: 251 FGLFTQSIGENLAHFPTGPALDDKFWLYLITYHLGLFLTITLGQIGVQGRKQGYW 415
GLF SIG L+HFPTGPAL +FWL+L+ +HLGLF+ +T GQIG +GR + Y+
Sbjct: 87 SGLFFDSIGTELSHFPTGPALTSQFWLWLVCWHLGLFICLTFGQIGFKGRTEDYF 141
>gb|AAM97011.1| expressed protein [Arabidopsis thaliana] gi|23197966|gb|AAN15510.1|
expressed protein [Arabidopsis thaliana]
Length = 140
Score = 77.8 bits (190), Expect = 2e-13
Identities = 45/93 (48%), Positives = 58/93 (61%), Gaps = 1/93 (1%)
Frame = +2
Query: 140 FPRDWVKTDPLGPRPGL-RWLDHPRPTSACLPSAASPWFGLFTQSIGENLAHFPTGPALD 316
F R+W++ D GL WL P+S + S GLF SIG LAHFPT PAL
Sbjct: 52 FERNWLRRDLNVVGFGLIGWL---APSSIPAINGKS-LTGLFFDSIGTELAHFPTPPALT 107
Query: 317 DKFWLYLITYHLGLFLTITLGQIGVQGRKQGYW 415
+FWL+L+T+HLGLFL +T GQIG +GR + Y+
Sbjct: 108 SQFWLWLVTWHLGLFLCLTFGQIGFKGRTEDYF 140
>ref|NP_563815.1| expressed protein [Arabidopsis thaliana] gi|15293053|gb|AAK93637.1|
unknown protein [Arabidopsis thaliana]
gi|20259137|gb|AAM14284.1| unknown protein [Arabidopsis
thaliana] gi|21592969|gb|AAM64918.1| putative 16kDa
membrane protein [Arabidopsis thaliana]
gi|21702253|emb|CAD37939.1| photosystem I subunit O
[Arabidopsis thaliana]
Length = 140
Score = 77.8 bits (190), Expect = 2e-13
Identities = 45/93 (48%), Positives = 58/93 (61%), Gaps = 1/93 (1%)
Frame = +2
Query: 140 FPRDWVKTDPLGPRPGL-RWLDHPRPTSACLPSAASPWFGLFTQSIGENLAHFPTGPALD 316
F R+W++ D GL WL P+S + S GLF SIG LAHFPT PAL
Sbjct: 52 FERNWLRRDLNVVGFGLIGWL---APSSIPAINGKS-LTGLFFDSIGTELAHFPTPPALT 107
Query: 317 DKFWLYLITYHLGLFLTITLGQIGVQGRKQGYW 415
+FWL+L+T+HLGLFL +T GQIG +GR + Y+
Sbjct: 108 SQFWLWLVTWHLGLFLCLTFGQIGFKGRTEDYF 140
>ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca]
Length = 754
Score = 31.6 bits (70), Expect(2) = 0.013
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 240 PVPGSASSPSLSARTWP-TSPPAPLWTT--SSGCT*SPTTWVCS*PSPWARSAC 392
P P ASSPS + T P +SPP PL + S T SP+ P+P A S+C
Sbjct: 166 PTPPDASSPSSAPSTQPASSPPEPLRSASPSKNSTNSPSPHP---PAPAASSSC 216
Score = 29.6 bits (65), Expect(2) = 0.013
Identities = 25/87 (28%), Positives = 35/87 (39%), Gaps = 13/87 (14%)
Frame = +2
Query: 17 HPNPTKW----PSLCAPLPCPRWPRARASPAAAPLVVR-----AEASNKSFPRDWVKTDP 169
+P+PT P+ P P P P SP+AA R ++S S P + +
Sbjct: 56 NPSPTAATPPAPATTTPPPTPTGPTCSPSPSAANSAPRESPPPPKSSAASPPPNSPPSTS 115
Query: 170 LGPRPGLRWLDH----PRPTSACLPSA 238
P P W H P P ++ PSA
Sbjct: 116 SAPAPATTWPPHSPSTPDPATSSSPSA 142
