KCC001262A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001262A_C01 KCC001262A_c01
gcacccggagtccaacctgtgcgtgtcggtgcgcgctttcacaggcaagggcgtgatgaa
gtcagacggcaagcctcgctTCACCGTCGATGGCAAGCCCATCTACCACTTCATGGGCAC
CTCCACCTTCAGCGAGTACACGGTGGTGCACGAGCAGTCGGTGGCCAAGATCGACGTGAA
CGCGCCGCTGGATAAGGTGTGCCTGCTGGGTTGCGGCGTGTCCACCGGCTGGGGCGCGGT
GTTCAACACCGCTAAGGTCACGGCCGGTAGCACGGTGGCAGTGTTTGGGCTGGGCGCGGT
GGGCCTGGCGGTGATCGAGGCGGCCAAGCGCGCGGGCGCGTCTCGCATCATTGCTGTGGA
CATCAACCCGACCAAGTTTCCCGCGGCCAAGGAGTTTGGTGCCACCGACTGCATCAACCC
CAAGGACCACGAGAAGCCCATTCAGCAGGTTATCGTGGAGATGACAGAGTGGGGCTGCGA
CTACACGTTCGAGTGCATCGGCAACACTGCCGTCATGCGCGCGGCTCTGGAGTGTGCTCA
CCGCGGCTGGGGCACGTCGGTCATCATTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001262A_C01 KCC001262A_c01
         (569 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P93436|ADHX_ORYSA Alcohol dehydrogenase class III (Glutathion...   280  8e-75
sp|P80572|ADHX_PEA Alcohol dehydrogenase class III (Glutathione-...   278  4e-74
pir||S71244 alcohol dehydrogenase (EC 1.1.1.1) class III - Arabi...   275  3e-73
gb|AAB06322.1| glutathione-dependent formaldehyde dehydrogenase       275  3e-73
ref|NP_199207.1| alcohol dehydrogenase class III (glutathione-de...   275  3e-73

>sp|P93436|ADHX_ORYSA Alcohol dehydrogenase class III (Glutathione-dependent formaldehyde
           dehydrogenase) (FDH) (FALDH) (GSH-FDH)
           gi|7430933|pir||T04164 formaldehyde dehydrogenase
           (glutathione) (EC 1.2.1.1) - rice
           gi|1675394|gb|AAB19117.1| class III ADH enzyme [Oryza
           sativa]
          Length = 381

 Score =  280 bits (717), Expect = 8e-75
 Identities = 134/187 (71%), Positives = 158/187 (83%)
 Frame = +2

Query: 8   ESNLCVSVRAFTGKGVMKSDGKPRFTVDGKPIYHFMGTSTFSEYTVVHEQSVAKIDVNAP 187
           ++NLC  VRA TG GVM +D K RF+++GKPIYHFMGTSTFS+YTVVH+ SVAKI+  AP
Sbjct: 111 KTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAP 170

Query: 188 LDKVCLLGCGVSTGWGAVFNTAKVTAGSTVAVFGLGAVGLAVIEAAKRAGASRIIAVDIN 367
           LDKVCLLGCGVSTG GAV+NTAKV AGS VA+FGLG VGLAV E AK AGASRII +DI+
Sbjct: 171 LDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDID 230

Query: 368 PTKFPAAKEFGATDCINPKDHEKPIQQVIVEMTEWGCDYTFECIGNTAVMRAALECAHRG 547
             KF  AK FG T+ +NPKDH+KPIQQVIV++T+ G DY+FECIGN +VMR+ALEC H+G
Sbjct: 231 SKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKG 290

Query: 548 WGTSVII 568
           WGTSVI+
Sbjct: 291 WGTSVIV 297

>sp|P80572|ADHX_PEA Alcohol dehydrogenase class III (Glutathione-dependent formaldehyde
           dehydrogenase) (FDH) (FALDH) (GSH-FDH)
          Length = 378

 Score =  278 bits (711), Expect = 4e-74
 Identities = 133/188 (70%), Positives = 156/188 (82%)
 Frame = +2

Query: 5   PESNLCVSVRAFTGKGVMKSDGKPRFTVDGKPIYHFMGTSTFSEYTVVHEQSVAKIDVNA 184
           P++NLC  VRA TG GVM +D K RF+V GKPIYHFMGTSTFS+YTVVH+ SVAKI  +A
Sbjct: 107 PKTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDA 166

Query: 185 PLDKVCLLGCGVSTGWGAVFNTAKVTAGSTVAVFGLGAVGLAVIEAAKRAGASRIIAVDI 364
           PLDKVCLLGCGV TG GAV+NTAKV  GS VA+FGLG VGLAV E AK AGASRII +DI
Sbjct: 167 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDI 226

Query: 365 NPTKFPAAKEFGATDCINPKDHEKPIQQVIVEMTEWGCDYTFECIGNTAVMRAALECAHR 544
           +  K+  AK FG T+ INPKDHEKPIQQVI+++T+ G DY+FEC+GN +VMR+ALEC H+
Sbjct: 227 DSNKYDTAKNFGVTEFINPKDHEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHK 286

Query: 545 GWGTSVII 568
           GWGTSVI+
Sbjct: 287 GWGTSVIV 294

>pir||S71244 alcohol dehydrogenase (EC 1.1.1.1) class III - Arabidopsis thaliana
           gi|1143388|emb|CAA57973.1| class III ADH,
           glutathione-dependent formaldehyde dehydrogenase.
           [Arabidopsis thaliana]
          Length = 379

 Score =  275 bits (703), Expect = 3e-73
 Identities = 130/187 (69%), Positives = 156/187 (82%)
 Frame = +2

Query: 8   ESNLCVSVRAFTGKGVMKSDGKPRFTVDGKPIYHFMGTSTFSEYTVVHEQSVAKIDVNAP 187
           ++NLC  VR+ TG G+M +D K RF+V+GKPIYHFMGTSTFS+YTVVH+ SVAKID  AP
Sbjct: 109 KTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAP 168

Query: 188 LDKVCLLGCGVSTGWGAVFNTAKVTAGSTVAVFGLGAVGLAVIEAAKRAGASRIIAVDIN 367
           LDKVCLLGCGV TG GAV+NTAKV  GS VA+FGLG VGLAV E AK AGASRII +DI+
Sbjct: 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDID 228

Query: 368 PTKFPAAKEFGATDCINPKDHEKPIQQVIVEMTEWGCDYTFECIGNTAVMRAALECAHRG 547
             K+  AK+FG  + +NPKDH+KPIQ+VIV++T+ G DY+FECIGN +VMRAALEC H+G
Sbjct: 229 SKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKG 288

Query: 548 WGTSVII 568
           WGTSVI+
Sbjct: 289 WGTSVIV 295

>gb|AAB06322.1| glutathione-dependent formaldehyde dehydrogenase
          Length = 379

 Score =  275 bits (703), Expect = 3e-73
 Identities = 130/187 (69%), Positives = 156/187 (82%)
 Frame = +2

Query: 8   ESNLCVSVRAFTGKGVMKSDGKPRFTVDGKPIYHFMGTSTFSEYTVVHEQSVAKIDVNAP 187
           ++NLC  VR+ TG G+M +D K RF+V+GKPIYHFMGTSTFS+YTVVH+ SVAKID  AP
Sbjct: 109 KTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAP 168

Query: 188 LDKVCLLGCGVSTGWGAVFNTAKVTAGSTVAVFGLGAVGLAVIEAAKRAGASRIIAVDIN 367
           LDKVCLLGCGV TG GAV+NTAKV  GS VA+FGLG VGLAV E AK AGASRII +DI+
Sbjct: 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDID 228

Query: 368 PTKFPAAKEFGATDCINPKDHEKPIQQVIVEMTEWGCDYTFECIGNTAVMRAALECAHRG 547
             K+  AK+FG  + +NPKDH+KPIQ+VIV++T+ G DY+FECIGN +VMRAALEC H+G
Sbjct: 229 SKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKG 288

Query: 548 WGTSVII 568
           WGTSVI+
Sbjct: 289 WGTSVIV 295

>ref|NP_199207.1| alcohol dehydrogenase class III (glutathione-dependent formaldehyde
           dehydrogenase) (GSH-FDH) (ADHIII) [Arabidopsis thaliana]
           gi|20141281|sp|Q96533|ADHX_ARATH Alcohol dehydrogenase
           class III (Glutathione-dependent formaldehyde
           dehydrogenase) (FDH) (FALDH) (GSH-FDH)
           gi|9758553|dbj|BAB09054.1| alcohol dehydrogenase (EC
           1.1.1.1) class III [Arabidopsis thaliana]
           gi|14517532|gb|AAK62656.1| AT5g43940/MRH10_4
           [Arabidopsis thaliana] gi|21592856|gb|AAM64806.1|
           alcohol dehydrogenase (EC 1.1.1.1) class III
           [Arabidopsis thaliana] gi|33589744|gb|AAQ22638.1|
           At5g43940/MRH10_4 [Arabidopsis thaliana]
          Length = 379

 Score =  275 bits (703), Expect = 3e-73
 Identities = 130/187 (69%), Positives = 156/187 (82%)
 Frame = +2

Query: 8   ESNLCVSVRAFTGKGVMKSDGKPRFTVDGKPIYHFMGTSTFSEYTVVHEQSVAKIDVNAP 187
           ++NLC  VR+ TG G+M +D K RF+V+GKPIYHFMGTSTFS+YTVVH+ SVAKID  AP
Sbjct: 109 KTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAP 168

Query: 188 LDKVCLLGCGVSTGWGAVFNTAKVTAGSTVAVFGLGAVGLAVIEAAKRAGASRIIAVDIN 367
           LDKVCLLGCGV TG GAV+NTAKV  GS VA+FGLG VGLAV E AK AGASRII +DI+
Sbjct: 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDID 228

Query: 368 PTKFPAAKEFGATDCINPKDHEKPIQQVIVEMTEWGCDYTFECIGNTAVMRAALECAHRG 547
             K+  AK+FG  + +NPKDH+KPIQ+VIV++T+ G DY+FECIGN +VMRAALEC H+G
Sbjct: 229 SKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKG 288

Query: 548 WGTSVII 568
           WGTSVI+
Sbjct: 289 WGTSVIV 295



EST assemble image


clone accession position
1 MXL037c05_r BP095181 1 455
2 CM031f08_r AV388374 164 544
3 MXL009a12_r BP093487 294 569




Chlamydomonas reinhardtii
Kazusa DNA Research Institute