Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001260A_C01 KCC001260A_c01
(642 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00058302.1| COG0119: Isopropylmalate/homocitrate/citramal... 42 0.006
ref|XP_069281.3| similar to fibroin-3 [Homo sapiens] 32 0.025
pir||T14313 hypothetical protein - carrot gi|1794145|dbj|BAA1912... 39 0.050
ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens] 39 0.050
dbj|BAC55728.1| hypothetical protein [Oryza sativa (japonica cul... 39 0.065
>ref|ZP_00058302.1| COG0119: Isopropylmalate/homocitrate/citramalate synthases
[Thermobifida fusca]
Length = 767
Score = 42.4 bits (98), Expect = 0.006
Identities = 30/84 (35%), Positives = 40/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 121 CGGGGHYSNCSRSSSGRCRIVGVLAAEAAGR-GPHATAASVAIVWRGMPTRLGAWRMPG- 294
C G + C RS R R V+A GR P ++ +++W G+P RLGA + G
Sbjct: 17 CAGSTDRTTCFRSVEVRLRHAEVVAGGGNGRLRPRSSTRPRSLLW-GVPRRLGAGTVDGQ 75
Query: 295 CQPALDSPPGSVPGGSTTGQRRGA 366
C PA PG T G RRG+
Sbjct: 76 CGPARQGCCRVRPGRGTQGPRRGS 99
>ref|XP_069281.3| similar to fibroin-3 [Homo sapiens]
Length = 842
Score = 32.3 bits (72), Expect(2) = 0.025
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = -3
Query: 118 CSCNCCPACATHTPPPIAPWLLAPLPALQPLPP 20
C+C C P C PP AP PLP PLPP
Sbjct: 593 CTCPCPPTCPC---PPGAPDPHVPLPPRVPLPP 622
Score = 26.9 bits (58), Expect(2) = 0.025
Identities = 12/34 (35%), Positives = 15/34 (43%), Gaps = 3/34 (8%)
Frame = -1
Query: 288 HPPSTQPCWHPPPH---NRHRRCSRMRASACCFC 196
H P + W PH RHR S R++ C C
Sbjct: 562 HDPEERYFWERGPHPQRGRHRHLSGFRSTGSCTC 595
>pir||T14313 hypothetical protein - carrot gi|1794145|dbj|BAA19128.1| unnamed
protein product [Daucus carota]
Length = 347
Score = 39.3 bits (90), Expect = 0.050
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = -3
Query: 424 FFTAT*SPLLDCPRMHDPPPHHGAAPWCCPRAHSQEVSPTRAGNPASAKHPAVLASPATQ 245
FF +T +P+LDC PPPHH AP P V P P P V+ P +
Sbjct: 2 FFFSTANPVLDCGSCEKPPPHHKPAPHKPPTVKPPVVKPPIVKPP--VVKPPVVKPPVVK 59
Query: 244 SP 239
P
Sbjct: 60 PP 61
>ref|XP_302837.1| hypothetical protein XP_302837 [Homo sapiens]
Length = 250
Score = 39.3 bits (90), Expect = 0.050
Identities = 50/182 (27%), Positives = 61/182 (33%), Gaps = 6/182 (3%)
Frame = -1
Query: 528 PPYCGPSNTWHTPPHDR*KCTADRPPNRQRTRQKNSSQQREVPC*IAPACTTHLRTTALP 349
PP P+ T PP + A PP R + + R P +P T A P
Sbjct: 85 PPTASPTRT---PPTES---PARTPPTASPARTPSRASPRRTPPRASP---TRTPPRASP 135
Query: 348 RGAAPGHTPRR*VQRGLATRHPPSTQPCWHPP---PHNRHRRCSRMRASACCFCCQHTNN 178
R P +PRR R TR PP P PP P R S R T +
Sbjct: 136 RRTPPRASPRRTPPRASPTRAPPRASPKRTPPRASPTRTPPRASPTRTPP-------TES 188
Query: 177 AASAAATAAAITIMAAAAADVAVTAAPPAPRIHRRRSRHGCWRLCQRCSPS---PLLKPS 7
A TA+ A + + PP R R R R SP P P+
Sbjct: 189 PARTPPTASP----ARTPSRASPRRMPPRASPTRTPPRASPTRTPPRASPKRTPPTASPT 244
Query: 6 SC 1
SC
Sbjct: 245 SC 246
Score = 34.3 bits (77), Expect = 1.6
Identities = 33/110 (30%), Positives = 40/110 (36%), Gaps = 3/110 (2%)
Frame = -1
Query: 543 SVVLGPPYCGPSNTWHTPPHDR*KCTAD---RPPNRQRTRQKNSSQQREVPC*IAPACTT 373
S+ PP P+ T T R TA PP R + P +P T
Sbjct: 8 SLTRTPPTASPARTPPTESPARTPPTASPARTPPRASPARTPPRASPGRTPPRASPRRTP 67
Query: 372 HLRTTALPRGAAPGHTPRR*VQRGLATRHPPSTQPCWHPPPHNRHRRCSR 223
A PR A P +PRR TR PP+ P PP + R SR
Sbjct: 68 ---PRASPRRAPPRASPRRTPPTASPTRTPPTESPARTPPTASPARTPSR 114
>dbj|BAC55728.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 184
Score = 38.9 bits (89), Expect = 0.065
Identities = 25/65 (38%), Positives = 30/65 (45%)
Frame = -1
Query: 258 PPPHNRHRRCSRMRASACCFCCQHTNNAASAAATAAAITIMAAAAADVAVTAAPPAPRIH 79
PPP H + SAC C+ A AAA+ + A AAA A+ AA A R H
Sbjct: 109 PPPPPPHALAAVAAVSACTRGCRRRRR--HPALDAAAVALRARAAATAALPAAAAAARTH 166
Query: 78 RRRSR 64
RR R
Sbjct: 167 GRRRR 171
