Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001253A_C01 KCC001253A_c01
(561 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC55730.1| putative 60S ribosomal protein L30 [Oryza sativa... 162 3e-39
ref|NP_182013.1| 60S ribosomal protein L24, putative [Arabidopsi... 160 1e-38
gb|AAO50767.1| similar to Mus musculus (Mouse). Similar to 60S r... 150 9e-36
gb|AAH42273.1| Similar to chromosome 15 open reading frame 15 [X... 150 1e-35
gb|AAH51780.1| Similar to chromosome 15 open reading frame 15 [D... 150 1e-35
>dbj|BAC55730.1| putative 60S ribosomal protein L30 [Oryza sativa (japonica
cultivar-group)]
Length = 163
Score = 162 bits (410), Expect = 3e-39
Identities = 69/98 (70%), Positives = 85/98 (86%)
Frame = +3
Query: 228 MRVEKCWFCSSSIYPGHGITFVRNDATVFRFCRGKCHKNFKMKRNPRKVRWTKSYRKLAG 407
MR+EKCWFCSS++YPGHGI FVRNDA +FRFCR KCHKNFKMKRNPRKV+WTK+YR L G
Sbjct: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRCLHG 60
Query: 408 KELAEDATFEMEKRRNRPEKYNRELVGKTLKAIGKIPK 521
K++ +D+TFE E++RNRPE+Y+R + +TLKAI I K
Sbjct: 61 KDMTQDSTFEFERKRNRPERYDRNVTEQTLKAISLITK 98
>ref|NP_182013.1| 60S ribosomal protein L24, putative [Arabidopsis thaliana]
gi|7440779|pir||T00407 60S ribosomal protein L30
[imported] - Arabidopsis thaliana
gi|2344898|gb|AAC31838.1| 60S ribosomal protein L30
[Arabidopsis thaliana] gi|15146220|gb|AAK83593.1|
At2g44860/T13E15.13 [Arabidopsis thaliana]
gi|20466079|gb|AAM19961.1| At2g44860/T13E15.13
[Arabidopsis thaliana] gi|21592958|gb|AAM64908.1| 60S
ribosomal protein L30 [Arabidopsis thaliana]
Length = 159
Score = 160 bits (405), Expect = 1e-38
Identities = 70/104 (67%), Positives = 85/104 (81%)
Frame = +3
Query: 228 MRVEKCWFCSSSIYPGHGITFVRNDATVFRFCRGKCHKNFKMKRNPRKVRWTKSYRKLAG 407
MR+EKCWFCSS+IYPGHGI FVRNDA +FRFCR KCHKNFKMKRNPRKV+WTK++R G
Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60
Query: 408 KELAEDATFEMEKRRNRPEKYNRELVGKTLKAIGKIPKSGKAQD 539
K++ +D TFE EK+RNRPE+Y+R + TL AI KI K A++
Sbjct: 61 KDMTKDTTFEFEKKRNRPERYDRNVTENTLMAIKKIAKIRTARE 104
>gb|AAO50767.1| similar to Mus musculus (Mouse). Similar to 60S ribosomal protein
L30 isolog [Dictyostelium discoideum]
Length = 164
Score = 150 bits (380), Expect = 9e-36
Identities = 63/105 (60%), Positives = 82/105 (78%)
Frame = +3
Query: 228 MRVEKCWFCSSSIYPGHGITFVRNDATVFRFCRGKCHKNFKMKRNPRKVRWTKSYRKLAG 407
MR+EKC+FCS +YPGHG+ FVRND FRFCR KCHKNFK+KRNPRK RWTK++RKL G
Sbjct: 1 MRIEKCYFCSGPVYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPRKTRWTKAFRKLNG 60
Query: 408 KELAEDATFEMEKRRNRPEKYNRELVGKTLKAIGKIPKSGKAQDR 542
KE+ D T E EK+RNRP KY+REL+ T+ A+ ++ K + +++
Sbjct: 61 KEMTVDKTLEFEKKRNRPVKYDRELINNTIIAMARVQKIKERREK 105
>gb|AAH42273.1| Similar to chromosome 15 open reading frame 15 [Xenopus laevis]
Length = 163
Score = 150 bits (379), Expect = 1e-35
Identities = 66/96 (68%), Positives = 80/96 (82%)
Frame = +3
Query: 228 MRVEKCWFCSSSIYPGHGITFVRNDATVFRFCRGKCHKNFKMKRNPRKVRWTKSYRKLAG 407
MRVEKC+FCS+ IYPGHG+ FVRND+ VFRFCR KCHKNFK KRNPRK+RWTK++RK AG
Sbjct: 1 MRVEKCYFCSAPIYPGHGMMFVRNDSKVFRFCRSKCHKNFKKKRNPRKIRWTKAFRKSAG 60
Query: 408 KELAEDATFEMEKRRNRPEKYNRELVGKTLKAIGKI 515
KEL D +FE EKRRN P KY REL K+++A+ ++
Sbjct: 61 KELTVDNSFEFEKRRNEPVKYQRELWSKSVEAMKRV 96
>gb|AAH51780.1| Similar to chromosome 15 open reading frame 15 [Danio rerio]
Length = 161
Score = 150 bits (379), Expect = 1e-35
Identities = 66/96 (68%), Positives = 78/96 (80%)
Frame = +3
Query: 228 MRVEKCWFCSSSIYPGHGITFVRNDATVFRFCRGKCHKNFKMKRNPRKVRWTKSYRKLAG 407
MR+EKC+FCS+ +YPGHG+ FVRND VFRFCR KCHKNFK KRNPRK RWTK++RK AG
Sbjct: 1 MRIEKCYFCSAPVYPGHGMMFVRNDCKVFRFCRSKCHKNFKKKRNPRKTRWTKAFRKSAG 60
Query: 408 KELAEDATFEMEKRRNRPEKYNRELVGKTLKAIGKI 515
KEL D + E EKRRN P KYNREL KT++A+ K+
Sbjct: 61 KELTVDNSLEFEKRRNTPVKYNRELWSKTVEAMRKV 96
