Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001245A_C01 KCC001245A_c01
(1045 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_746845.1| D-lactate dehydrogenase, putative [Pseudomonas ... 261 1e-68
ref|ZP_00141210.1| COG0247: Fe-S oxidoreductase [Pseudomonas aer... 258 9e-68
ref|ZP_00097755.1| COG0277: FAD/FMN-containing dehydrogenases [D... 258 2e-67
ref|ZP_00086495.1| COG0247: Fe-S oxidoreductase [Pseudomonas flu... 256 5e-67
ref|NP_253460.1| probable ferredoxin [Pseudomonas aeruginosa PA0... 253 4e-66
>ref|NP_746845.1| D-lactate dehydrogenase, putative [Pseudomonas putida KT2440]
gi|24986491|gb|AAN70309.1|AE016671_10 D-lactate
dehydrogenase, putative [Pseudomonas putida KT2440]
Length = 936
Score = 261 bits (668), Expect = 1e-68
Identities = 140/342 (40%), Positives = 201/342 (57%)
Frame = +3
Query: 3 PSHTLNPGVILNRDQDAHIKFLKPSPAASPIVNRCIECGFCESNCPSRDITLTPRQRISV 182
P+ LNP V+L+ D D H+K LKP PAA IV++CIECGFCE CPS+ +TL+PRQRI +
Sbjct: 506 PNGILNPDVVLSEDPDIHLKNLKPLPAADKIVDKCIECGFCEPVCPSKGLTLSPRQRIVM 565
Query: 183 YREMYRLKQLGPGASEEEKKQLAAMSSSYAYDGEQTCAADGMCQEKCPVKINTGDLIKSM 362
+R++ ++ G E + SY Y G TCAA G+C ++CPV INTG+L+K +
Sbjct: 566 WRDIQAKQRAGIDTRE--------LMQSYQYQGIDTCAATGLCAQRCPVGINTGELVKKL 617
Query: 363 RAEHMKEEKTASGMADWLAANFGVINSNVPRFLNIVNAMHSVVGSAPLSAISRALNAATN 542
R++ KTA DWLA +F S L N ++G+ L +S +L+ A+
Sbjct: 618 RSQAADHAKTA----DWLAEHFHTALSGARLTLTAANTARKLLGAPRLGRLSASLSKASK 673
Query: 543 HFVPVWNPYMPKGAAPLKVPAPPAPAAAEASGIPRKVVYMPSCVTRMMGPAASDTETAAV 722
+P W P MP+ P P A ++ +VVY+ +CV+R+MGPA +D E +++
Sbjct: 674 GRLPQWTPAMPQ-------PLRPLAFGATSNDARPRVVYLAACVSRVMGPAYADREQSSL 726
Query: 723 HEKVMSLFGKAGYEVIIPEGVASQCCGMMFNSRGFKDAAASKGAELEAALLKASDNGKIP 902
+K +L KAGY+V+ P+ S CCG F S+G+ + A K EL ALL AS G P
Sbjct: 727 LDKTRALLEKAGYQVVFPDNADSLCCGQPFASKGYPEQAEHKRQELITALLHASRGGLDP 786
Query: 903 IVIDTSPCLAQVKSQISEPSLRFALYEPVEFIRHFLVDKLEW 1028
I DTSPC ++ +S+ R LY+PV FIR L+D+LE+
Sbjct: 787 IYCDTSPCTLRLVQDLSD--TRLDLYDPVRFIRTHLLDRLEF 826
>ref|ZP_00141210.1| COG0247: Fe-S oxidoreductase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 938
Score = 258 bits (660), Expect = 9e-68
Identities = 141/342 (41%), Positives = 201/342 (58%)
Frame = +3
Query: 3 PSHTLNPGVILNRDQDAHIKFLKPSPAASPIVNRCIECGFCESNCPSRDITLTPRQRISV 182
P LNPGV+L+ D +H+K LKP PAA IV++CIECGFCE CPSR +TLTPRQRI +
Sbjct: 506 PRGILNPGVVLSDDPQSHLKNLKPLPAADEIVDKCIECGFCEPVCPSRGLTLTPRQRIVL 565
Query: 183 YREMYRLKQLGPGASEEEKKQLAAMSSSYAYDGEQTCAADGMCQEKCPVKINTGDLIKSM 362
+R++ K+ G + A+ Y Y G TCAA G+C ++CPV INTG+LI+ +
Sbjct: 566 WRDIQAKKRAGVDTT--------ALERDYRYQGIDTCAATGLCAQRCPVNINTGELIRKL 617
Query: 363 RAEHMKEEKTASGMADWLAANFGVINSNVPRFLNIVNAMHSVVGSAPLSAISRALNAATN 542
R ++ +G A WLA NF L + ++G+ L+ SR L+ A+
Sbjct: 618 RGADVRH----AGGATWLARNFAGAMRAARFALLAADGARRLLGAPLLARASRGLSQASG 673
Query: 543 HFVPVWNPYMPKGAAPLKVPAPPAPAAAEASGIPRKVVYMPSCVTRMMGPAASDTETAAV 722
VP W P +P+ P+++ PPAP E +VVY+ +CV+R MGPA D E +
Sbjct: 674 GRVPQWTPALPQ---PVRLAPPPAPLDDERP----RVVYLAACVSRAMGPAFGDEEREPL 726
Query: 723 HEKVMSLFGKAGYEVIIPEGVASQCCGMMFNSRGFKDAAASKGAELEAALLKASDNGKIP 902
+K L KAGY+V+ P+ + + CCG F S+G+ A K EL AALL+AS G P
Sbjct: 727 LDKTRRLLEKAGYQVVFPDNLDNLCCGQPFASKGYAKQADDKRDELLAALLQASRGGLDP 786
Query: 903 IVIDTSPCLAQVKSQISEPSLRFALYEPVEFIRHFLVDKLEW 1028
I DTSPC ++ + +P R +++PV+FIR L+D+LE+
Sbjct: 787 IYCDTSPCTLRLVQGLDDP--RLQIHDPVKFIRSHLLDRLEF 826
>ref|ZP_00097755.1| COG0277: FAD/FMN-containing dehydrogenases [Desulfitobacterium
hafniense]
Length = 978
Score = 258 bits (658), Expect = 2e-67
Identities = 141/348 (40%), Positives = 200/348 (56%), Gaps = 1/348 (0%)
Frame = +3
Query: 3 PSHTLNPGVILNRDQDAHIKFLKPSPAASPIVNRCIECGFCESNCPSRDITLTPRQRISV 182
P + LNPGVI+N +++ +++ LK PA+ ++RC CGFC+ CPS+ +T TPR RI +
Sbjct: 539 PHNLLNPGVIINDNKNVYLENLKAMPASHDTIDRCTNCGFCQDICPSKHLTTTPRMRIIL 598
Query: 183 YREMYRLKQLGPGASEEEKKQLAAMSSSYAYDGEQTCAADGMCQEKCPVKINTGDLIKSM 362
RE+ LK+ G + K+L + Y Y G TCA DG+C CP+ INTGD K +
Sbjct: 599 QREISDLKRTG-----RDPKRLMRLLRDYDYAGNATCATDGLCATSCPLNINTGDNTKYL 653
Query: 363 RAEHMKEEKTASGMADWLAANFGVINSNVPRFLNIVNAMHSVVGSAPLSAISRALNAATN 542
R+ + A LA N + + L V+ +H +G+ L ++R +
Sbjct: 654 RSRAITPATRKVARA--LAKNMNGVTGIMRFGLGAVDGVHGFLGTRILGGMARTARDVSQ 711
Query: 543 HFVPVWNPYMP-KGAAPLKVPAPPAPAAAEASGIPRKVVYMPSCVTRMMGPAASDTETAA 719
+P+WN +MP KG ++ P P A+ G KVVY PSC++R MGPA D +
Sbjct: 712 SKIPLWNEWMPSKGKGKVR---PRPPFASAQGGEVLKVVYFPSCISRSMGPARKDKDQRP 768
Query: 720 VHEKVMSLFGKAGYEVIIPEGVASQCCGMMFNSRGFKDAAASKGAELEAALLKASDNGKI 899
++E + SL KAGYEVIIP G+ CCGM + S+GF D A K AELE LL+AS+NGK
Sbjct: 769 LNEVMCSLLAKAGYEVIIPPGLDKLCCGMPWESKGFFDIADEKSAELEKVLLQASENGKY 828
Query: 900 PIVIDTSPCLAQVKSQISEPSLRFALYEPVEFIRHFLVDKLEWKKVRD 1043
PIV DTSPCL ++K + L+E VEF FL+ +L+ KK R+
Sbjct: 829 PIVCDTSPCLYRMKRAFTS---GIELHESVEFTHDFLLHRLKIKKARE 873
>ref|ZP_00086495.1| COG0247: Fe-S oxidoreductase [Pseudomonas fluorescens PfO-1]
Length = 1049
Score = 256 bits (654), Expect = 5e-67
Identities = 137/342 (40%), Positives = 202/342 (59%)
Frame = +3
Query: 3 PSHTLNPGVILNRDQDAHIKFLKPSPAASPIVNRCIECGFCESNCPSRDITLTPRQRISV 182
P+ LNP V+L+ D H+K LKP PAA IV++CIECGFCE CPS+ +TL+PRQRI +
Sbjct: 615 PNGILNPDVVLSEDPQIHLKHLKPLPAADEIVDKCIECGFCEPVCPSKGLTLSPRQRIVI 674
Query: 183 YREMYRLKQLGPGASEEEKKQLAAMSSSYAYDGEQTCAADGMCQEKCPVKINTGDLIKSM 362
+R++ K+ G +E EK +Y Y G TCAA G+C ++CPV INTG+L+K +
Sbjct: 675 WRDIQARKRAGIDTTELEK--------AYEYQGIDTCAATGLCAQRCPVGINTGELVKKL 726
Query: 363 RAEHMKEEKTASGMADWLAANFGVINSNVPRFLNIVNAMHSVVGSAPLSAISRALNAATN 542
R+ H KTA+ + NF L++ N ++G+ L+ +S L +
Sbjct: 727 RSRHATHTKTAN----LIEGNFATTLQGARFTLHVANGARMLMGAPRLAKLSATLTRLSK 782
Query: 543 HFVPVWNPYMPKGAAPLKVPAPPAPAAAEASGIPRKVVYMPSCVTRMMGPAASDTETAAV 722
VP+W MP+ ++ +PA + PR VVY+ +CV+R+MGPAA D E ++
Sbjct: 783 GQVPLWTNAMPQPEKAIRF----SPAVTDER--PR-VVYLAACVSRVMGPAAGDKEQTSL 835
Query: 723 HEKVMSLFGKAGYEVIIPEGVASQCCGMMFNSRGFKDAAASKGAELEAALLKASDNGKIP 902
++K L KAGY+V+ P+ + + CCG F S+G+ + A K EL ALL+AS G P
Sbjct: 836 YDKTRGLLEKAGYQVVFPDNLDNLCCGQPFASKGYAEQAEHKRQELIGALLQASRGGLDP 895
Query: 903 IVIDTSPCLAQVKSQISEPSLRFALYEPVEFIRHFLVDKLEW 1028
I DTSPC ++ + ++R LY+PV FIR L+D+LE+
Sbjct: 896 IYCDTSPCTLRLVQDVG--NVRLDLYDPVRFIRTHLMDRLEF 935
>ref|NP_253460.1| probable ferredoxin [Pseudomonas aeruginosa PA01]
gi|11351293|pir||H83050 probable ferredoxin PA4772
[imported] - Pseudomonas aeruginosa (strain PAO1)
gi|9951036|gb|AAG08158.1|AE004890_11 probable ferredoxin
[Pseudomonas aeruginosa PAO1]
Length = 938
Score = 253 bits (646), Expect = 4e-66
Identities = 139/342 (40%), Positives = 199/342 (57%)
Frame = +3
Query: 3 PSHTLNPGVILNRDQDAHIKFLKPSPAASPIVNRCIECGFCESNCPSRDITLTPRQRISV 182
P LNPGV+L+ D +H+K LKP PAA IV++CIECGFCE CPSR +TLTPRQRI +
Sbjct: 506 PRGILNPGVVLSDDPQSHLKNLKPLPAADEIVDKCIECGFCEPVCPSRGLTLTPRQRIVL 565
Query: 183 YREMYRLKQLGPGASEEEKKQLAAMSSSYAYDGEQTCAADGMCQEKCPVKINTGDLIKSM 362
+R++ K+ G + A+ Y Y G TCAA G+C ++CPV INTG+LI+ +
Sbjct: 566 WRDIQAKKRAGVDTT--------ALERDYRYQGIDTCAATGLCAQRCPVNINTGELIRKL 617
Query: 363 RAEHMKEEKTASGMADWLAANFGVINSNVPRFLNIVNAMHSVVGSAPLSAISRALNAATN 542
R + + A+ WLA NF L + ++G+ L+ SR L+ A+
Sbjct: 618 RGADARHAEGAT----WLARNFAGAMRAARFALLAADGARRLLGAPLLARASRGLSQASG 673
Query: 543 HFVPVWNPYMPKGAAPLKVPAPPAPAAAEASGIPRKVVYMPSCVTRMMGPAASDTETAAV 722
VP W P +P+ P+++ P AP E +VVY+ +CV+R MGPA D E +
Sbjct: 674 GRVPQWTPALPQ---PVRLAPPTAPLDDERP----RVVYLAACVSRAMGPAFGDEEREPL 726
Query: 723 HEKVMSLFGKAGYEVIIPEGVASQCCGMMFNSRGFKDAAASKGAELEAALLKASDNGKIP 902
+K L KAGY+V+ P+ + + CCG F S+G+ A K EL AALL+AS G P
Sbjct: 727 LDKTRRLLEKAGYQVVFPDNLDNLCCGQPFASKGYAKQADDKRDELLAALLQASRGGLDP 786
Query: 903 IVIDTSPCLAQVKSQISEPSLRFALYEPVEFIRHFLVDKLEW 1028
I DTSPC ++ + +P R +++PV+FIR L+D+LE+
Sbjct: 787 IYCDTSPCTLRLVQGLDDP--RLQIHDPVKFIRSHLLDRLEF 826
