KCC001227A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001227A_C01 KCC001227A_c01
GCACCAGAAAACGTGCGACATAATTTGTATTTCCATCCTTAAATCGAGCTAGCTAATCTG
CTACGCCTCAAAGACCTTTGCTTCCGACTTACAGTACCCACTTAGACGCAGCATTCCTTC
TTGCAATTTAACTTGCGTATTACATAGGCTCCAAACAGCGCAGCCATGGCGAGTGCCGCT
GCCCGCGAGCGCTATGCCCGCAAGAATGAGCAGAACGAGCTAGAGCGTGCCTTTAACACG
ATAGATAGCAAGGGCGACAAGAAAATAGATGCAGAGGAGTTGACGGAACTCTTCCTGCGG
CTCGGGCACAAACCCAAGCGTGGCGAGGTGGAGGACATGATTTGGGAGGTCGACGAGGAC
TGCGATGGCTGCATCAGCCTTCTAGAATTCCAGACGCTATACACTCGTTGCCGCGATGAC
AAGACCGGCTATGAGCCGCGCGGCCTGTTCAATGTGGTCGAGTTCGTCATGAACGACAAG
AACAACCAGGGCTTCATCACACTGGAGGAGGCGATGCAAATCATGTACCTGCGCTATGGG
CGAGCGGAGCTGGACATGCAGCTGGAGCAGGTGTTCGCCCGGCGACTTGACGGGGGAATC
CCCCCCCCCGGGGTCCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001227A_C01 KCC001227A_c01
         (617 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAP49435.1| outer dynein arm-docking complex protein DC3 [Chl...   280  1e-74
gb|EAA21037.1| calmodulin-like protein [Plasmodium yoelii yoelii]     103  2e-21
ref|NP_702309.1| hypothetical protein [Plasmodium falciparum 3D7...   102  4e-21
gb|AAA33569.1| calmodulin                                              65  1e-09
gb|AAC96324.1| calmodulin [Magnaporthe grisea]                         63  3e-09

>gb|AAP49435.1| outer dynein arm-docking complex protein DC3 [Chlamydomonas
           reinhardtii]
          Length = 184

 Score =  280 bits (716), Expect = 1e-74
 Identities = 137/137 (100%), Positives = 137/137 (100%)
 Frame = +1

Query: 166 MASAAARERYARKNEQNELERAFNTIDSKGDKKIDAEELTELFLRLGHKPKRGEVEDMIW 345
           MASAAARERYARKNEQNELERAFNTIDSKGDKKIDAEELTELFLRLGHKPKRGEVEDMIW
Sbjct: 1   MASAAARERYARKNEQNELERAFNTIDSKGDKKIDAEELTELFLRLGHKPKRGEVEDMIW 60

Query: 346 EVDEDCDGCISLLEFQTLYTRCRDDKTGYEPRGLFNVVEFVMNDKNNQGFITLEEAMQIM 525
           EVDEDCDGCISLLEFQTLYTRCRDDKTGYEPRGLFNVVEFVMNDKNNQGFITLEEAMQIM
Sbjct: 61  EVDEDCDGCISLLEFQTLYTRCRDDKTGYEPRGLFNVVEFVMNDKNNQGFITLEEAMQIM 120

Query: 526 YLRYGRAELDMQLEQVF 576
           YLRYGRAELDMQLEQVF
Sbjct: 121 YLRYGRAELDMQLEQVF 137

>gb|EAA21037.1| calmodulin-like protein [Plasmodium yoelii yoelii]
          Length = 207

 Score =  103 bits (258), Expect = 2e-21
 Identities = 46/128 (35%), Positives = 78/128 (60%)
 Frame = +1

Query: 208 EQNELERAFNTIDSKGDKKIDAEELTELFLRLGHKPKRGEVEDMIWEVDEDCDGCISLLE 387
           E+  L+R F  +D     KI A  L ++  +  +K  + EVE MIWE DE+ D C+   E
Sbjct: 44  EKKNLQRVFKMMDKDNTGKISACNLHDILHKYNYKISKSEVERMIWEFDENMDNCLDYDE 103

Query: 388 FQTLYTRCRDDKTGYEPRGLFNVVEFVMNDKNNQGFITLEEAMQIMYLRYGRAELDMQLE 567
              LY RC +DK    P  L+N+++F M D    G+IT+E+ +QI+Y+R+GR ++D++++
Sbjct: 104 IYFLYLRCVNDKKKQIPSDLYNIIQFFMFDYEMNGYITVEKTLQILYVRFGREKMDLEVQ 163

Query: 568 QVFARRLD 591
           ++F  + +
Sbjct: 164 EIFGDKYE 171

>ref|NP_702309.1| hypothetical protein [Plasmodium falciparum 3D7]
           gi|23497491|gb|AAN37033.1|AE014823_13 hypothetical
           protein [Plasmodium falciparum 3D7]
          Length = 207

 Score =  102 bits (254), Expect = 4e-21
 Identities = 45/128 (35%), Positives = 77/128 (60%)
 Frame = +1

Query: 208 EQNELERAFNTIDSKGDKKIDAEELTELFLRLGHKPKRGEVEDMIWEVDEDCDGCISLLE 387
           E+  L+R F+ +D     KI    L ++  R  +K  + EVE MIWE D++ D C+   E
Sbjct: 44  EKKNLQRVFSMMDKDNTGKISVCNLHDILHRYNYKISKSEVERMIWEFDDNMDNCLDYDE 103

Query: 388 FQTLYTRCRDDKTGYEPRGLFNVVEFVMNDKNNQGFITLEEAMQIMYLRYGRAELDMQLE 567
              LY RC +DK    P  L+N+++F M D    G+IT+E+ +QI+Y+R+GR ++D +++
Sbjct: 104 IYFLYLRCVNDKKKQVPSDLYNIIQFFMFDYEMNGYITVEKTLQILYVRFGREKMDQEVQ 163

Query: 568 QVFARRLD 591
           ++F  + +
Sbjct: 164 EIFGDKYE 171

>gb|AAA33569.1| calmodulin
          Length = 149

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 39/109 (35%), Positives = 57/109 (51%), Gaps = 1/109 (0%)
 Frame = +1

Query: 202 KNEQNELERAFNTIDSKGDKKIDAEELTELFLRLGHKPKRGEVEDMIWEVDEDCDGCISL 381
           + + +E + AF+  D  GD +I  +EL  + L LG  P   E++DMI EVD D +G I  
Sbjct: 7   EEQVSEFKEAFSLFDKDGDGQITTKELGTVMLSLGQNPSESELQDMINEVDADNNGTIDF 66

Query: 382 LEFQTLYTR-CRDDKTGYEPRGLFNVVEFVMNDKNNQGFITLEEAMQIM 525
            EF T+  R  +D  +  E R  F V      D++N GFI+  E   +M
Sbjct: 67  PEFLTMMARKMKDTDSEEEIREAFKVF-----DRDNNGFISAAELRHVM 110

>gb|AAC96324.1| calmodulin [Magnaporthe grisea]
          Length = 149

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 38/109 (34%), Positives = 57/109 (51%), Gaps = 1/109 (0%)
 Frame = +1

Query: 202 KNEQNELERAFNTIDSKGDKKIDAEELTELFLRLGHKPKRGEVEDMIWEVDEDCDGCISL 381
           + + +E ++AF+  D  GD +I  +EL  +   LG  P   E++DMI EVD D +G I  
Sbjct: 7   EEQVSEFKKAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDF 66

Query: 382 LEFQTLYTR-CRDDKTGYEPRGLFNVVEFVMNDKNNQGFITLEEAMQIM 525
            EF T+  R  +D  +  E R  F V      D++N GFI+  E   +M
Sbjct: 67  PEFLTMMARKMKDTDSEEEIREAFKVF-----DRDNNGFISAAELRHVM 110



EST assemble image


clone accession position
1 LC097e12_r AV625766 1 468
2 CM067e11_r AV390942 4 576
3 CM035g03_r AV388698 4 428
4 HC064a06_r AV636777 13 454
5 HC075c08_r AV637605 16 414
6 CM082b07_r AV392137 19 593
7 CM070b07_r AV391278 22 354
8 CM027g08_r AV387625 22 624
9 LC090f10_r AV625305 25 551
10 CM049b08_r AV389588 29 286
11 HC036a05_r AV634647 34 494
12 LC007f08_r AV619387 110 600
13 MX019g03_r BP086896 112 585




Chlamydomonas reinhardtii
Kazusa DNA Research Institute