KCC001223A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC001223A_C01 KCC001223A_c01
ctcaacgtcacggtgtccaacgcgaccatctcactgctggtgaacaacggcacggccgtc
gccaacaacagccaggcttgCGTTGCGGCCTGGACCACCGACACCTCCTACCTCAAGTCC
CTGGCTGACACGGTCATCAGCGGCCTGGGGTCGGGCAAGGATGTGCTGTCGTCGCTCATG
ACGCCGGAGCTGTTTGGCAGCTGCAACACTAGCTCCAAGTTGATGTCCACCGTGAACACC
TGCCCCATCAAGCTCAACAAGGCCGACTGCGCCGCTGTGTCGGGCTGCAGCTGGGTGGAC
CTGGCGCAGGCCTGCACCGTGGCCATGGACGTCGTGGAGCGCATGATGCTGGACCCCAAG
GACATCTGGGTGGCGGCCTACAACAACGCCAGCGCACTGTGCGACTCACTGGCGACCCAG
TCCAGCTGCAACGTCACCACGCCCCGCCTGAGCCTCAACCTCACCGTCGACCCCGCCATT
CTCAAGAACCTCAGCAGCCTGTTG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001223A_C01 KCC001223A_c01
(504 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyc... 52 4e-06
ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophil... 52 5e-06
gb|AAA59875.1| mucin 50 1e-05
pir||A43932 mucin 2 precursor, intestinal - human (fragments) 50 1e-05
gb|AAA59163.1| mucin 50 1e-05
>ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680] gi|29605870|dbj|BAC69934.1| putative
protoporphyrinogen oxidase [Streptomyces avermitilis
MA-4680]
Length = 474
Score = 52.0 bits (123), Expect = 4e-06
Identities = 60/166 (36%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Frame = +2
Query: 38 W*TTARPSPTTARLALRPGPPTP--PTSSP----WLTRSSAAWGRARMCCRRS*RRSCLA 199
W + P P + A R PP P P SS W +AA G A S SCL
Sbjct: 280 WSSPCPPRPPPSCCAPRHPPPRPSWPASSTRPWRWSPSPTAAVGPASPKAAAS---SCLP 336
Query: 200 AATLAPS*---CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPA-----PWPWTSWSA*C-- 349
+ T APS PP + A S + PT C +G T RR + P WTS + C
Sbjct: 337 S-TGAPSRHRRSPPRSGAGSRTRTPTCWCCARRSGGTARRRSSAGTTPASWTSRATTCAR 395
Query: 350 ---WTPRTSGWRPTTTPAHCATHWRPSPAATSPR-PA*ASTSPSTP 475
W PR S P +PA T R +P+AT+ PA A+TSPS P
Sbjct: 396 RPAWPPRRS---PAASPAG-PTACRSTPSATTRAWPASATTSPSCP 437
Score = 37.7 bits (86), Expect = 0.081
Identities = 42/145 (28%), Positives = 51/145 (34%), Gaps = 12/145 (8%)
Frame = -3
Query: 421 TGSPVSRTVRWRCCRPPPRCPWGPAS-CAPRRPWPR-CRPAPGPPSCSPTQRRSRPC*A* 248
TG+P R + R R W PA C PW C P P P C+P RP
Sbjct: 248 TGAPGDRAAQSRG-RAGRVGGWSPAVVCCTPTPWSSPCPPRPPPSCCAPRHPPPRPS--- 303
Query: 247 WGRCSRWTSTWS*CCSCQTAPAS*ATTAHPC------PTPGR**PCQPGT*GRRCR---- 98
W S WS + PAS A C P+ R P + G G R R
Sbjct: 304 WPASSTRPWRWSPSPTAAVGPASPKAAASSCLPSTGAPSRHRRSPPRSGA-GSRTRTPTC 362
Query: 97 WSRPQRKPGCCWRRPCRCSPAVRWS 23
W +R G RR + W+
Sbjct: 363 WCCARRSGGTARRRSSAGTTPASWT 387
Score = 35.4 bits (80), Expect = 0.40
Identities = 42/152 (27%), Positives = 53/152 (34%), Gaps = 29/152 (19%)
Frame = -3
Query: 385 CC---RPPPRCPWGPASCAPRR--PWPRCRPAPGPP-----SC-----SPTQRRSRPC*A 251
CC PPPR W +S P R P P P P SC +P++ R P +
Sbjct: 292 CCAPRHPPPRPSWPASSTRPWRWSPSPTAAVGPASPKAAASSCLPSTGAPSRHRRSPPRS 351
Query: 250 *WGRCSRWTSTWS*CC------------SCQTAPAS*ATTAHPCPTPGR**PCQPGT*GR 107
G +R + W CC S T PAS + A C R
Sbjct: 352 GAGSRTRTPTCW--CCARRSGGTARRRSSAGTTPASWTSRATTC--------------AR 395
Query: 106 RCRWSRPQRKPGCCWRRP--CRCSPAVRWSRW 17
R W P+R P P CR +P+ W
Sbjct: 396 RPAWP-PRRSPAASPAGPTACRSTPSATTRAW 426
>ref|NP_523475.2| Salivary gland secretion 1 CG3047-PA [Drosophila melanogaster]
gi|28380257|gb|AAF50957.3| CG3047-PA [Drosophila
melanogaster]
Length = 1225
Score = 51.6 bits (122), Expect = 5e-06
Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 1/150 (0%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
TT+RP+ TT R P P T++P RS+ +R RS +T AP+
Sbjct: 970 TTSRPTTTTPRSTTTPSTSRPTTTTP---RSTTTTSTSRPTTTTP--RSTTKTSTCAPTT 1024
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRP-TTTPAHC 400
P + ++++RPT R+ T RP T+ TP TS RP TTTP
Sbjct: 1025 TTPRSTTTTTTSRPTTTTPRSTTTTTTSRPT----TTTPRSTTTPCTS--RPTTTTPRST 1078
Query: 401 ATHWRPSPAATSPRPA*ASTSPSTPPFSRT 490
T P T+PR +TP S T
Sbjct: 1079 TTTTTSRPTTTTPRSTTTPCPTTTPSASPT 1108
Score = 43.9 bits (102), Expect = 0.001
Identities = 53/181 (29%), Positives = 66/181 (36%), Gaps = 14/181 (7%)
Frame = +2
Query: 2 STSRCPTRPSHCW*TTARPSPTTARLALRPGPPTP-PTSSPWLTRSSAAWGRARMCCRRS 178
ST T P C TT P TT RP TP T++ +R + R+
Sbjct: 206 STQGTQTTPCTCAQTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTTTTR 265
Query: 179 *RRSCLAAATLAPS*CPP*TPAPSSST-----RPTAPLCRAAAGWTWRRPAPWPWTSWSA 343
+ T S C P T P S+T RPT R T +P T S
Sbjct: 266 RPTTTTPRCTTTTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTT--TTSTCSPTRTTPRS- 322
Query: 344 *CWTPRTSGWRPTTTPAHCATHWRPS------PAATSPR--PA*ASTSPSTPPFSRTSAA 499
T TS RPTTT C T PS P T+PR ++ P+T T+
Sbjct: 323 ---TTTTSTSRPTTTTPRCTT--TPSTTCTRRPTTTTPRSTTTTCTSGPTTTTPRSTTTT 377
Query: 500 C 502
C
Sbjct: 378 C 378
Score = 43.9 bits (102), Expect = 0.001
Identities = 48/161 (29%), Positives = 61/161 (37%), Gaps = 3/161 (1%)
Frame = +2
Query: 2 STSRCPTRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS* 181
+T RC T S C TT P TT RP TP ++ T S R+
Sbjct: 270 TTPRCTTTTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTSTCSPT----------RTT 319
Query: 182 RRSCLAAATLAPS*CPP*---TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CW 352
RS +T P+ P TP+ + + RPT R+ P S + C
Sbjct: 320 PRSTTTTSTSRPTTTTPRCTTTPSTTCTRRPTTTTPRSTTTTCTSGPTTTTPRSTTTTC- 378
Query: 353 TPRTSGWRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTP 475
TSG TTTP T P T+PR +TS S P
Sbjct: 379 ---TSG-PTTTTPRSTTTTSTSGPTTTTPRST-TTTSTSGP 414
Score = 43.5 bits (101), Expect = 0.001
Identities = 41/146 (28%), Positives = 56/146 (38%), Gaps = 5/146 (3%)
Frame = +2
Query: 2 STSRCPTRPSHCW*TTARPSPTTARLALRPGPPTP-PTSSPWLTRSSAAWGRARMCCRRS 178
+T R T+ S C TT P TT RP TP T++ +R + R+ S
Sbjct: 1009 TTPRSTTKTSTCAPTTTTPRSTTTTTTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPCTS 1068
Query: 179 *RRSCLAAATLAPS*CPP*TPAPSSSTRP---TAPLCRAAAGWTWRRPAPW-PWTSWSA* 346
+ +T + P T P S+T P T P T RRP P P +
Sbjct: 1069 RPTTTTPRSTTTTTTSRPTTTTPRSTTTPCPTTTPSASPTRTTTTRRPCPCHPQPPYQIP 1128
Query: 347 CWTPRTSGWRPTTTPAHCATHWRPSP 424
W S W P T + W+P+P
Sbjct: 1129 PW----SWWYPNPTYPNPVWPWQPNP 1150
Score = 43.1 bits (100), Expect = 0.002
Identities = 46/158 (29%), Positives = 62/158 (39%)
Frame = +2
Query: 2 STSRCPTRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS* 181
+T RC T PS T RP+ TT R P T++P T ++ G
Sbjct: 334 TTPRCTTTPSTT--CTRRPTTTTPRSTTTTCTSGPTTTTPRSTTTTCTSGPTTTT----- 386
Query: 182 RRSCLAAATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPR 361
RS +T P+ P + +S++ PT R+ T P T+ T
Sbjct: 387 PRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTS 442
Query: 362 TSGWRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTP 475
TSG TTTP T P T+PR +TS S P
Sbjct: 443 TSG-PTTTTPRSTTTTSTSGPTTTTPRST-TTTSTSGP 478
Score = 42.0 bits (97), Expect = 0.004
Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Frame = +2
Query: 47 TARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS*C 226
T+ P+ TT R P T++P T ++ G RS +T AP+
Sbjct: 891 TSCPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSGPTTTT-----PRSTTKTSTCAPTTT 945
Query: 227 PP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRP-TTTPAHCA 403
P + +S++RPT R+ T RP T+ TP TS RP TTTP
Sbjct: 946 TPRSTTTTSTSRPTTTTPRSTTTTTTSRPT----TTTPRSTTTPSTS--RPTTTTPRSTT 999
Query: 404 THWRPSPAATSPRPA*ASTSPST 472
T P T+PR ++T ST
Sbjct: 1000 TTSTSRPTTTTPR---STTKTST 1019
Score = 42.0 bits (97), Expect = 0.004
Identities = 44/166 (26%), Positives = 56/166 (33%), Gaps = 20/166 (12%)
Frame = +2
Query: 2 STSRCPTRPSHCW*TTARPSPTTARLALRPGPPTP------PTSSPWLTRSSAAWGRARM 163
+T R T PS TT P TT RP TP T +P T +
Sbjct: 977 TTPRSTTTPSTSRPTTTTPRSTTTTSTSRPTTTTPRSTTKTSTCAPTTTTPRSTTTTTTS 1036
Query: 164 CCRRS*RRSCLAAATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA 343
+ RS T P+ P + ++RPT R+ T RP S +
Sbjct: 1037 RPTTTTPRSTTTTTTSRPTTTTPRSTTTPCTSRPTTTTPRSTTTTTTSRPTTTTPRSTTT 1096
Query: 344 *C--WTPRTSGWRPTTTPAHCATH------------WRPSPAATSP 439
C TP S R TTT C H W P+P +P
Sbjct: 1097 PCPTTTPSASPTRTTTTRRPCPCHPQPPYQIPPWSWWYPNPTYPNP 1142
Score = 41.2 bits (95), Expect = 0.007
Identities = 44/164 (26%), Positives = 58/164 (34%), Gaps = 6/164 (3%)
Frame = +2
Query: 2 STSRCPTRPSHCW*TTARPSPTTARLALRPGPPTPP------TSSPWLTRSSAAWGRARM 163
+T R T S TT P TT P TP TS P T +
Sbjct: 849 TTPRSTTTTSTSCPTTTTPRSTTTTCTSGPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTS 908
Query: 164 CCRRS*RRSCLAAATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA 343
C + RS T P+ P + +S+ PT R+ + RP T+ +
Sbjct: 909 CPTTTTPRSTTTTCTSGPTTTTPRSTTKTSTCAPTTTTPRSTTTTSTSRP-----TTTTP 963
Query: 344 *CWTPRTSGWRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTP 475
T T+ TTTP T P T+PR +TS S P
Sbjct: 964 RSTTTTTTSRPTTTTPRSTTTPSTSRPTTTTPRST-TTTSTSRP 1006
Score = 40.0 bits (92), Expect = 0.016
Identities = 43/149 (28%), Positives = 66/149 (43%), Gaps = 13/149 (8%)
Frame = +2
Query: 95 PPTPPTSSPWLTRSSAAWGRARMCCRRS*R--RSCLAAATLAPS*CPP*TPAPSSSTRPT 268
P T T++P T S+ C ++ RS +T P+ P + ++++RPT
Sbjct: 193 PCTQETTTPTPTCSTQGTQTTPCTCAQTTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPT 252
Query: 269 APLCRAAAGWTWRRPAPWP--WTSWSA*C----WTPR----TSGWRPTTTPAHCATHWRP 418
R+ T RRP T+ ++ C TPR T+ RPTTT C T
Sbjct: 253 TTTPRSTTTTTTRRPTTTTPRCTTTTSTCAPTTTTPRSTTTTTTSRPTTTTPRCTTTTST 312
Query: 419 -SPAATSPRPA*ASTSPSTPPFSRTSAAC 502
SP T+PR ++T+ ST + T+ C
Sbjct: 313 CSPTRTTPR---STTTTSTSRPTTTTPRC 338
Score = 37.4 bits (85), Expect = 0.11
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 730 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 784
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 785 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 839
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 840 TTSTSGPTTTTPRST-TTTSTSCP 862
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 394 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 448
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 449 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 503
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 504 TTSTSGPTTTTPRST-TTTSTSGP 526
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 586 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 640
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 641 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 695
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 696 TTSTSGPTTTTPRST-TTTSTSGP 718
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 602 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 656
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 657 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 711
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 712 TTSTSGPTTTTPRST-TTTSTSGP 734
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 618 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 672
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 673 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 727
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 728 TTSTSGPTTTTPRST-TTTSTSGP 750
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 570 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 624
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 625 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 679
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 680 TTSTSGPTTTTPRST-TTTSTSGP 702
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 458 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 512
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 513 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 567
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 568 TTSTSGPTTTTPRST-TTTSTSGP 590
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 714 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 768
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 769 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 823
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 824 TTSTSGPTTTTPRST-TTTSTSGP 846
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 442 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 496
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 497 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 551
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 552 TTSTSGPTTTTPRST-TTTSTSGP 574
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 698 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 752
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 753 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 807
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 808 TTSTSGPTTTTPRST-TTTSTSGP 830
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 666 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 720
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 721 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 775
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 776 TTSTSGPTTTTPRST-TTTSTSGP 798
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 426 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 480
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 481 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 535
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 536 TTSTSGPTTTTPRST-TTTSTSGP 558
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 650 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 704
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 705 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 759
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 760 TTSTSGPTTTTPRST-TTTSTSGP 782
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 634 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 688
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 689 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 743
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 744 TTSTSGPTTTTPRST-TTTSTSGP 766
Score = 37.0 bits (84), Expect = 0.14
Identities = 39/144 (27%), Positives = 57/144 (39%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 410 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 464
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 465 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 519
Query: 404 THWRPSPAATSPRPA*ASTSPSTP 475
T P T+PR +TS S P
Sbjct: 520 TTSTSGPTTTTPRST-TTTSTSGP 542
Score = 36.2 bits (82), Expect = 0.24
Identities = 39/155 (25%), Positives = 60/155 (38%), Gaps = 2/155 (1%)
Frame = +2
Query: 44 TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLAAATLAPS* 223
+T+ P+ TT R P T++P T +++ G RS +T P+
Sbjct: 746 STSGPTTTTPRSTTTTSTSGPTTTTPRSTTTTSTSGPTTTT-----PRSTTTTSTSGPTT 800
Query: 224 CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRPTTTPAHCA 403
P + +S++ PT R+ T P T+ T TSG TTTP
Sbjct: 801 TTPRSTTTTSTSGPTTTTPRS----TTTTSTSGPTTTTPRSTTTTSTSG-PTTTTPRSTT 855
Query: 404 THWRPSPAATSPR--PA*ASTSPSTPPFSRTSAAC 502
T P T+PR ++ P+T T+ C
Sbjct: 856 TTSTSCPTTTTPRSTTTTCTSGPTTTTPRSTTTTC 890
Score = 31.6 bits (70), Expect = 5.8
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Frame = +2
Query: 191 CLAAATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSG 370
C+ +T+ P+ +P +T PT P C T P T+ + T ++
Sbjct: 182 CIDTSTVIPT-----SPCTQETTTPT-PTCSTQG--TQTTPCTCAQTTTTPRSTTTTSTS 233
Query: 371 WRPTTTPAHCATHWRPSPAATSPRPA*AST----SPSTPPFSRTSAAC 502
TTTP T P T+PR +T + +TP + T++ C
Sbjct: 234 RPTTTTPRSTTTTTTSRPTTTTPRSTTTTTTRRPTTTTPRCTTTTSTC 281
>gb|AAA59875.1| mucin
Length = 573
Score = 50.4 bits (119), Expect = 1e-05
Identities = 52/168 (30%), Positives = 70/168 (40%), Gaps = 4/168 (2%)
Frame = +2
Query: 2 STSRCP--TRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRR 175
ST+ P T PS TT P PTT P PPT T SP +T ++
Sbjct: 289 STTTLPPTTTPSPPPTTTTTPPPTTT-----PSPPTTTTPSPPITTTTTPPPTTTPS--- 340
Query: 176 S*RRSCLAAATLAPS*CPP*TP--APSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*C 349
+ T PS PP T PS +T P++P+ + P+P P T +
Sbjct: 341 -------SPITTTPS--PPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTP-- 389
Query: 350 WTPRTSGWRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRTS 493
+P T+ PTTT SP T+P P + T P+ PFS T+
Sbjct: 390 -SPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPP-SITPPTFSPFSTTT 435
Score = 47.8 bits (112), Expect = 8e-05
Identities = 49/165 (29%), Positives = 65/165 (38%), Gaps = 2/165 (1%)
Frame = +2
Query: 2 STSRCP--TRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRR 175
ST+ P T PS TT P PTT P TPPTS+ L ++
Sbjct: 171 STTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTP---------- 220
Query: 176 S*RRSCLAAATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWT 355
S T P P TP+P ++T P+ P P+P T+ +
Sbjct: 221 ----SPPPTTTTTPP--PTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTP---P 271
Query: 356 PRTSGWRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRT 490
P T+ PTTTP T P T+P P T+ +TPP + T
Sbjct: 272 PTTTPSPPTTTPITPPTSTTTLPPTTTPSP--PPTTTTTPPPTTT 314
Score = 43.1 bits (100), Expect = 0.002
Identities = 46/163 (28%), Positives = 62/163 (37%), Gaps = 2/163 (1%)
Frame = +2
Query: 11 RCPTRPSHCW*TTARPSPTTARL--ALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*R 184
+C T PS T + P +T L P PPT T++P T + +
Sbjct: 52 KCITTPSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSP------------- 98
Query: 185 RSCLAAATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRT 364
+ T P P TP+P ST T P P+P P T
Sbjct: 99 --PITTTTTPP---PTTTPSPPISTTTTPPPTTT--------PSP------------PTT 133
Query: 365 SGWRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRTS 493
+ PTTTP+ T P T+P P +T+P TPP S T+
Sbjct: 134 TPSPPTTTPSPPTTTTTTPPPTTTPSP--PTTTPITPPASTTT 174
Score = 43.1 bits (100), Expect = 0.002
Identities = 47/161 (29%), Positives = 61/161 (37%), Gaps = 3/161 (1%)
Frame = +2
Query: 20 TRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLA 199
T PS TT P PTT P TPP S+ L ++
Sbjct: 140 TTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPP------P 193
Query: 200 AATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRP---APWPWTSWSA*CWTPRTSG 370
T +P P TP S++T P T P P P T+ + T T+
Sbjct: 194 TTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTT 253
Query: 371 WRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRTS 493
PTTTP+ T P T+P P +T+P TPP S T+
Sbjct: 254 PPPTTTPSPPTTTTTTPPPTTTPSP--PTTTPITPPTSTTT 292
Score = 42.7 bits (99), Expect = 0.003
Identities = 44/158 (27%), Positives = 60/158 (37%)
Frame = +2
Query: 20 TRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLA 199
T PS TT P PTT P TPPTS+ L ++ +
Sbjct: 258 TTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTT--------TTTP 309
Query: 200 AATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRP 379
T PS TP+P +T T P + P+P T + T +S
Sbjct: 310 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 369
Query: 380 TTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRTS 493
TTTP+ T P T+P P +T+PS P + T+
Sbjct: 370 TTTPSSTTTPSPPPTTMTTPSP---TTTPSPPTTTMTT 404
>pir||A43932 mucin 2 precursor, intestinal - human (fragments)
Length = 3020
Score = 50.4 bits (119), Expect = 1e-05
Identities = 52/168 (30%), Positives = 70/168 (40%), Gaps = 4/168 (2%)
Frame = +2
Query: 2 STSRCP--TRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRR 175
ST+ P T PS TT P PTT P PPT T SP +T ++
Sbjct: 1631 STTTLPPTTTPSPPPTTTTTPPPTTT-----PSPPTTTTPSPPITTTTTPPPTTTPS--- 1682
Query: 176 S*RRSCLAAATLAPS*CPP*TP--APSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*C 349
+ T PS PP T PS +T P++P+ + P+P P T +
Sbjct: 1683 -------SPITTTPS--PPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTP-- 1731
Query: 350 WTPRTSGWRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRTS 493
+P T+ PTTT SP T+P P + T P+ PFS T+
Sbjct: 1732 -SPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPP-SITPPTFSPFSTTT 1777
Score = 47.8 bits (112), Expect = 8e-05
Identities = 49/165 (29%), Positives = 65/165 (38%), Gaps = 2/165 (1%)
Frame = +2
Query: 2 STSRCP--TRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRR 175
ST+ P T PS TT P PTT P TPPTS+ L ++
Sbjct: 1513 STTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTP---------- 1562
Query: 176 S*RRSCLAAATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWT 355
S T P P TP+P ++T P+ P P+P T+ +
Sbjct: 1563 ----SPPPTTTTTPP--PTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTP---P 1613
Query: 356 PRTSGWRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRT 490
P T+ PTTTP T P T+P P T+ +TPP + T
Sbjct: 1614 PTTTPSPPTTTPITPPTSTTTLPPTTTPSP--PPTTTTTPPPTTT 1656
Score = 43.5 bits (101), Expect = 0.001
Identities = 46/163 (28%), Positives = 60/163 (36%), Gaps = 2/163 (1%)
Frame = +2
Query: 11 RCPTRPSHCW*TTARPSPTTARL--ALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*R 184
+C T PS T + P TT L P PPT T++P T + +
Sbjct: 1394 KCITTPSPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSP------------- 1440
Query: 185 RSCLAAATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRT 364
T + P TP+P ST T P P+P P T
Sbjct: 1441 -----PITTTTTPLPTTTPSPPISTTTTPPPTTT--------PSP------------PTT 1475
Query: 365 SGWRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRTS 493
+ PTTTP+ T P T+P P T+P TPP S T+
Sbjct: 1476 TPSPPTTTPSPPTTTTTTPPPTTTPSP--PMTTPITPPASTTT 1516
Score = 43.1 bits (100), Expect = 0.002
Identities = 47/161 (29%), Positives = 61/161 (37%), Gaps = 3/161 (1%)
Frame = +2
Query: 20 TRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLA 199
T PS TT P PTT P TPP S+ L ++
Sbjct: 1482 TTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPP------P 1535
Query: 200 AATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRP---APWPWTSWSA*CWTPRTSG 370
T +P P TP S++T P T P P P T+ + T T+
Sbjct: 1536 TTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTT 1595
Query: 371 WRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRTS 493
PTTTP+ T P T+P P +T+P TPP S T+
Sbjct: 1596 PPPTTTPSPPTTTTTTPPPTTTPSP--PTTTPITPPTSTTT 1634
Score = 42.7 bits (99), Expect = 0.003
Identities = 44/158 (27%), Positives = 60/158 (37%)
Frame = +2
Query: 20 TRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLA 199
T PS TT P PTT P TPPTS+ L ++ +
Sbjct: 1600 TTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTT--------TTTP 1651
Query: 200 AATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRP 379
T PS TP+P +T T P + P+P T + T +S
Sbjct: 1652 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 1711
Query: 380 TTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRTS 493
TTTP+ T P T+P P +T+PS P + T+
Sbjct: 1712 TTTPSSTTTPSPPPTTMTTPSP---TTTPSPPTTTMTT 1746
>gb|AAA59163.1| mucin
Length = 1270
Score = 50.4 bits (119), Expect = 1e-05
Identities = 52/168 (30%), Positives = 70/168 (40%), Gaps = 4/168 (2%)
Frame = +2
Query: 2 STSRCP--TRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRR 175
ST+ P T PS TT P PTT P PPT T SP +T ++
Sbjct: 1006 STTTLPPTTTPSPPPTTTTTPPPTTT-----PSPPTTTTPSPPITTTTTPPPTTTPS--- 1057
Query: 176 S*RRSCLAAATLAPS*CPP*TP--APSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*C 349
+ T PS PP T PS +T P++P+ + P+P P T +
Sbjct: 1058 -------SPITTTPS--PPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTP-- 1106
Query: 350 WTPRTSGWRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRTS 493
+P T+ PTTT SP T+P P + T P+ PFS T+
Sbjct: 1107 -SPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPP-SITPPTFSPFSTTT 1152
Score = 47.8 bits (112), Expect = 8e-05
Identities = 49/165 (29%), Positives = 65/165 (38%), Gaps = 2/165 (1%)
Frame = +2
Query: 2 STSRCP--TRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRR 175
ST+ P T PS TT P PTT P TPPTS+ L ++
Sbjct: 888 STTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTP---------- 937
Query: 176 S*RRSCLAAATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWT 355
S T P P TP+P ++T P+ P P+P T+ +
Sbjct: 938 ----SPPPTTTTTPP--PTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTP---P 988
Query: 356 PRTSGWRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRT 490
P T+ PTTTP T P T+P P T+ +TPP + T
Sbjct: 989 PTTTPSPPTTTPITPPTSTTTLPPTTTPSP--PPTTTTTPPPTTT 1031
Score = 43.5 bits (101), Expect = 0.001
Identities = 46/163 (28%), Positives = 60/163 (36%), Gaps = 2/163 (1%)
Frame = +2
Query: 11 RCPTRPSHCW*TTARPSPTTARL--ALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*R 184
+C T PS T + P TT L P PPT T++P T + +
Sbjct: 769 KCITTPSPPTTTPSPPPTTTTTLPPTTTPSPPTTTTTTPPPTTTPSP------------- 815
Query: 185 RSCLAAATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRT 364
T + P TP+P ST T P P+P P T
Sbjct: 816 -----PITTTTTPLPTTTPSPPISTTTTPPPTTT--------PSP------------PTT 850
Query: 365 SGWRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRTS 493
+ PTTTP+ T P T+P P T+P TPP S T+
Sbjct: 851 TPSPPTTTPSPPTTTTTTPPPTTTPSP--PMTTPITPPASTTT 891
Score = 43.1 bits (100), Expect = 0.002
Identities = 47/161 (29%), Positives = 61/161 (37%), Gaps = 3/161 (1%)
Frame = +2
Query: 20 TRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLA 199
T PS TT P PTT P TPP S+ L ++
Sbjct: 857 TTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPP------P 910
Query: 200 AATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRP---APWPWTSWSA*CWTPRTSG 370
T +P P TP S++T P T P P P T+ + T T+
Sbjct: 911 TTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTT 970
Query: 371 WRPTTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRTS 493
PTTTP+ T P T+P P +T+P TPP S T+
Sbjct: 971 PPPTTTPSPPTTTTTTPPPTTTPSP--PTTTPITPPTSTTT 1009
Score = 42.7 bits (99), Expect = 0.003
Identities = 44/158 (27%), Positives = 60/158 (37%)
Frame = +2
Query: 20 TRPSHCW*TTARPSPTTARLALRPGPPTPPTSSPWLTRSSAAWGRARMCCRRS*RRSCLA 199
T PS TT P PTT P TPPTS+ L ++ +
Sbjct: 975 TTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTT--------TTTP 1026
Query: 200 AATLAPS*CPP*TPAPSSSTRPTAPLCRAAAGWTWRRPAPWPWTSWSA*CWTPRTSGWRP 379
T PS TP+P +T T P + P+P T + T +S
Sbjct: 1027 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 1086
Query: 380 TTTPAHCATHWRPSPAATSPRPA*ASTSPSTPPFSRTS 493
TTTP+ T P T+P P +T+PS P + T+
Sbjct: 1087 TTTPSSTTTPSPPPTTMTTPSP---TTTPSPPTTTMTT 1121
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
LC074g04_r |
AV624228 |
1 |
504 |
2 |
CM027c08_r |
AV387620 |
171 |
670 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute