KCC001222A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001222A_C01 KCC001222A_c01
taaAAAGATGGCCACCATGCTCAACGCCCAGCGTGTCGCCCTGAAGGGCCGCGCCTTCCA
GCCTTGCGCGCCCATGGTCGCTGTCCGTGGTCGCCGCGCCCTGGCCGTCCGCGCCTCGGG
CGACGACGCGTTCGCCAACTACAAGCCCACTATCGCGGCATTGTTCCCCGGCCAGGGTGC
GCAGAGCGTCGGCATGGCCAAGGACCTTGTGGCGACCGTGCCGAAGGCCAAGGAGATGTT
CGACAAGGCGTCTGAGATCCTGGGCTACGACCTGCTGAAGGTGTGCGTGGAGGGCCCCAA
GGAGAAGCTGGACAGCACCGCCGTGAGTCAGCCCGCTATCTACGTGGCCTCGCTGGCCGC
CGTGGAGAAGCTGCGCGCGGACGAGGGCCAGGCCGCCATTGACGCCATTGACGTGGCGTG
CGGCCTGTCGCTGGGCGAGTACACGGCCCTGGCCTTCGCTGGTGCCATGAGCTTCGAGGA
CGGCCTGCGGCTGGTGAAGCTGCGCGGCGAGTCCATGCAGGCGGCTGCTGACGCGCAGCC
CAGCAGCATGGTGTCCGTCATTGGGCTGGACAGCGCCAAGGTGGCGGAGCTGTGCAAGGC
CGCCACGGAGCAGGTGGGTCAGGACAAGCCGGTCCAGATCGCCAACTACCTGTGCCCCGG
CAACTACGCCGTGTCGGGCTCCAAGGAGGGCTGCGACGCTGTGGAGAAGCTGGGCAAGAG
CTTCGGCGCGCGCATGACTGTGCGCCTGGCTGTGGCCGGCGCCTTCCACACCTCCTACAT
GTCCCCCGCCGTGGACAAGCTCAAGGCCGCCCTGGCGCAGACCAACATCGTCAAGCCGCG
CATCCCTGTGGTCTCCAACGTGGACGCCCAGCCGCACTCCGACCCCGCCGTCATCAAGGA
CATCCTGTCGCGCCAGGTGACCTCCCCCGTGCTGTGGGAGAACACCATTAAGTCGCTGCA
GGAGAAGGGCCTGACCAAGTCCTACGAGGTCGGCCCCGGCAAGGTCATCGCTGGCATCGT
TAAGCGCATGGACAAGGGCGCGAACATCGTCAACATC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001222A_C01 KCC001222A_c01
         (1057 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAB45522.1| [acyl-carrier protein] S-malonyltransferase [Bra...   422  e-117
gb|AAM64515.1| putative malonyl-CoA:Acyl carrier protein transac...   419  e-116
gb|AAG43518.1|AF210698_1 malonyl-CoA:ACP transacylase [Perilla f...   419  e-116
ref|NP_565697.1| malonyl-CoA:Acyl carrier protein transacylase -...   419  e-116
pir||T00580 probable [acyl-carrier-protein] S-malonyltransferase...   419  e-116

>emb|CAB45522.1| [acyl-carrier protein] S-malonyltransferase [Brassica napus]
          Length = 349

 Score =  422 bits (1086), Expect = e-117
 Identities = 221/330 (66%), Positives = 263/330 (78%), Gaps = 6/330 (1%)
 Frame = +2

Query: 86   RGRRALAVRASG-----DDAFANYKPTIAALFPGQGAQSVGMAKDLVATVPKAKEMFDKA 250
            R R +++V A+      D  FA+YKPT A LFPGQGAQ+VGM K+ ++ V  A E+++KA
Sbjct: 21   RSRVSISVSAASHTAVNDSLFADYKPTSAFLFPGQGAQAVGMGKEALS-VAAAGELYNKA 79

Query: 251  SEILGYDLLKVCVEGPKEKLDSTAVSQPAIYVASLAAVEKLRADEG-QAAIDAIDVACGL 427
            + ILGYDL+ VCV GPKEKLDST +SQPAIYV SLAAVE LR  EG +  I+++DV CGL
Sbjct: 80   NHILGYDLVDVCVNGPKEKLDSTVISQPAIYVTSLAAVELLRVREGGEKIINSVDVTCGL 139

Query: 428  SLGEYTALAFAGAMSFEDGLRLVKLRGESMQAAADAQPSSMVSVIGLDSAKVAELCKAAT 607
            SLGEYTALAFAGA SFEDGL+LVKLRGE+MQAAADA  S+MVS+IGLDS KV +LC AA 
Sbjct: 140  SLGEYTALAFAGAFSFEDGLKLVKLRGEAMQAAADAAKSAMVSIIGLDSEKVQQLCDAAN 199

Query: 608  EQVGQDKPVQIANYLCPGNYAVSGSKEGCDAVEKLGKSFGARMTVRLAVAGAFHTSYMSP 787
            ++V +   VQIANYLCPGNYAVSG  +G + VE   KSF ARMTVRLAVAGAFHTS+M P
Sbjct: 200  QEVDEADKVQIANYLCPGNYAVSGGLKGIEVVEAKAKSFKARMTVRLAVAGAFHTSFMEP 259

Query: 788  AVDKLKAALAQTNIVKPRIPVVSNVDAQPHSDPAVIKDILSRQVTSPVLWENTIKSLQEK 967
            AV +L+AALA+T I  PRIPV+SNVDAQPH+DP  IK IL+RQVTSPV WE T+K+L  K
Sbjct: 260  AVSRLEAALAETEIRSPRIPVISNVDAQPHADPDTIKKILARQVTSPVQWETTVKTLLSK 319

Query: 968  GLTKSYEVGPGKVIAGIVKRMDKGANIVNI 1057
            GL  SYE+GPGKVIAGI KR+DK A++ NI
Sbjct: 320  GLKSSYELGPGKVIAGIFKRVDKSASVENI 349

>gb|AAM64515.1| putative malonyl-CoA:Acyl carrier protein transacylase [Arabidopsis
            thaliana]
          Length = 367

 Score =  419 bits (1078), Expect = e-116
 Identities = 221/331 (66%), Positives = 259/331 (77%), Gaps = 7/331 (2%)
 Frame = +2

Query: 86   RGRRALAVRASG------DDAFANYKPTIAALFPGQGAQSVGMAKDLVATVPKAKEMFDK 247
            R R +++V A        D  FA+YKPT A LFPGQGAQ+VGM K+   +V  A E++ K
Sbjct: 36   RSRISMSVSAGSQSTTVHDSLFADYKPTSAFLFPGQGAQAVGMGKE-AQSVGAAGELYKK 94

Query: 248  ASEILGYDLLKVCVEGPKEKLDSTAVSQPAIYVASLAAVEKLRADEG-QAAIDAIDVACG 424
            A++ILGYDLL +CV GPKEKLDST +SQPAIYV SLAAVE LR  EG +  I+++DV CG
Sbjct: 95   ANDILGYDLLDICVNGPKEKLDSTVISQPAIYVTSLAAVELLRVREGGEQIINSVDVTCG 154

Query: 425  LSLGEYTALAFAGAMSFEDGLRLVKLRGESMQAAADAQPSSMVSVIGLDSAKVAELCKAA 604
            LSLGEYTALAFAGA SFEDGL+LVKLRGE+MQAAADA  S+MVS+IGLDS KV +LC AA
Sbjct: 155  LSLGEYTALAFAGAFSFEDGLKLVKLRGEAMQAAADAAKSAMVSIIGLDSEKVQQLCDAA 214

Query: 605  TEQVGQDKPVQIANYLCPGNYAVSGSKEGCDAVEKLGKSFGARMTVRLAVAGAFHTSYMS 784
             ++V +   VQIANYLCPGNYAVSG  +G + VE   KSF ARMTVRLAVAGAFHTS+M 
Sbjct: 215  NQEVDEADKVQIANYLCPGNYAVSGGLKGIEVVEAKAKSFKARMTVRLAVAGAFHTSFME 274

Query: 785  PAVDKLKAALAQTNIVKPRIPVVSNVDAQPHSDPAVIKDILSRQVTSPVLWENTIKSLQE 964
            PAV +L+AALA T I  PRIPV+SNVDAQPH+DP  IK IL+RQVTSPV WE T+K+L  
Sbjct: 275  PAVSRLEAALAATEIRSPRIPVISNVDAQPHADPDTIKKILARQVTSPVQWETTVKTLLS 334

Query: 965  KGLTKSYEVGPGKVIAGIVKRMDKGANIVNI 1057
            KGL  SYE+GPGKVIAGI KR+DK A+  NI
Sbjct: 335  KGLQSSYELGPGKVIAGIFKRVDKSASFENI 365

>gb|AAG43518.1|AF210698_1 malonyl-CoA:ACP transacylase [Perilla frutescens]
          Length = 376

 Score =  419 bits (1077), Expect = e-116
 Identities = 220/314 (70%), Positives = 253/314 (80%), Gaps = 2/314 (0%)
 Frame = +2

Query: 122  DDA-FANYKPTIAALFPGQGAQSVGMAKDLVATVPKAKEMFDKASEILGYDLLKVCVEGP 298
            DDA F +YKP+ A LFPGQGAQ+VGM  +    VP A E++ +A++ILG+DLL  C+ GP
Sbjct: 62   DDALFKDYKPSTAFLFPGQGAQTVGMGLE-AQKVPAAAELYKRANDILGFDLLDTCINGP 120

Query: 299  KEKLDSTAVSQPAIYVASLAAVEKLRA-DEGQAAIDAIDVACGLSLGEYTALAFAGAMSF 475
            KEKLDST +SQPAIYV SLAAVE LRA D GQ  ID++DV CGLSLGEYTALAFAGA SF
Sbjct: 121  KEKLDSTVLSQPAIYVTSLAAVEVLRARDGGQQIIDSVDVTCGLSLGEYTALAFAGAFSF 180

Query: 476  EDGLRLVKLRGESMQAAADAQPSSMVSVIGLDSAKVAELCKAATEQVGQDKPVQIANYLC 655
            EDGL+LVKLRGE+MQ AADA  S+MVS+IGLDSAKV  LC AA E V +   VQIAN+LC
Sbjct: 181  EDGLKLVKLRGEAMQDAADAAQSAMVSIIGLDSAKVQALCDAANEDVDEANKVQIANFLC 240

Query: 656  PGNYAVSGSKEGCDAVEKLGKSFGARMTVRLAVAGAFHTSYMSPAVDKLKAALAQTNIVK 835
             GNYAVSG  +G +AVE   KSF ARMTVRLAVAGAFHT +M PAV +L+ ALA T I K
Sbjct: 241  TGNYAVSGGLKGIEAVEAKAKSFKARMTVRLAVAGAFHTGFMEPAVSRLEGALASTVISK 300

Query: 836  PRIPVVSNVDAQPHSDPAVIKDILSRQVTSPVLWENTIKSLQEKGLTKSYEVGPGKVIAG 1015
            PRIPV+SNVDA+PH+DP  IK IL+RQVTSPV WE T+K+L  +GLTKSYE+GPGKVIAG
Sbjct: 301  PRIPVISNVDAEPHADPETIKKILARQVTSPVQWETTVKTLLSRGLTKSYELGPGKVIAG 360

Query: 1016 IVKRMDKGANIVNI 1057
            IVKRMDKGA I NI
Sbjct: 361  IVKRMDKGAAIENI 374

>ref|NP_565697.1| malonyl-CoA:Acyl carrier protein transacylase -related [Arabidopsis
            thaliana] gi|20197098|gb|AAM14913.1| putative
            malonyl-CoA:Acyl carrier protein transacylase
            [Arabidopsis thaliana] gi|20258830|gb|AAM13897.1|
            putative malonyl-CoA:Acyl carrier protein transacylase
            [Arabidopsis thaliana] gi|21689721|gb|AAM67482.1|
            putative malonyl-CoA [Arabidopsis thaliana]
          Length = 393

 Score =  419 bits (1076), Expect = e-116
 Identities = 221/331 (66%), Positives = 259/331 (77%), Gaps = 7/331 (2%)
 Frame = +2

Query: 86   RGRRALAVRASG------DDAFANYKPTIAALFPGQGAQSVGMAKDLVATVPKAKEMFDK 247
            R R +++V A        D  FA+YKPT A LFPGQGAQ+VGM K+   +V  A E++ K
Sbjct: 62   RSRISMSVSAGSQSTTVHDSLFADYKPTSAFLFPGQGAQAVGMGKES-QSVGAAGELYKK 120

Query: 248  ASEILGYDLLKVCVEGPKEKLDSTAVSQPAIYVASLAAVEKLRADEG-QAAIDAIDVACG 424
            A++ILGYDLL +CV GPKEKLDST +SQPAIYV SLAAVE LR  EG +  I+++DV CG
Sbjct: 121  ANDILGYDLLDICVNGPKEKLDSTVISQPAIYVTSLAAVELLRVREGGEQIINSVDVTCG 180

Query: 425  LSLGEYTALAFAGAMSFEDGLRLVKLRGESMQAAADAQPSSMVSVIGLDSAKVAELCKAA 604
            LSLGEYTALAFAGA SFEDGL+LVKLRGE+MQAAADA  S+MVS+IGLDS KV +LC AA
Sbjct: 181  LSLGEYTALAFAGAFSFEDGLKLVKLRGEAMQAAADAAKSAMVSIIGLDSEKVQQLCDAA 240

Query: 605  TEQVGQDKPVQIANYLCPGNYAVSGSKEGCDAVEKLGKSFGARMTVRLAVAGAFHTSYMS 784
             ++V +   VQIANYLCPGNYAVSG  +G + VE   KSF ARMTVRLAVAGAFHTS+M 
Sbjct: 241  NQEVDEADKVQIANYLCPGNYAVSGGLKGIEVVEAKAKSFKARMTVRLAVAGAFHTSFME 300

Query: 785  PAVDKLKAALAQTNIVKPRIPVVSNVDAQPHSDPAVIKDILSRQVTSPVLWENTIKSLQE 964
            PAV +L+AALA T I  PRIPV+SNVDAQPH+DP  IK IL+RQVTSPV WE T+K+L  
Sbjct: 301  PAVSRLEAALAATEIRSPRIPVISNVDAQPHADPDTIKKILARQVTSPVQWETTVKTLLS 360

Query: 965  KGLTKSYEVGPGKVIAGIVKRMDKGANIVNI 1057
            KGL  SYE+GPGKVIAGI KR+DK A+  NI
Sbjct: 361  KGLKSSYELGPGKVIAGIFKRVDKSASFENI 391

>pir||T00580 probable [acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39)
            T27E13.6 [similarity] - Arabidopsis thaliana
          Length = 367

 Score =  419 bits (1076), Expect = e-116
 Identities = 221/331 (66%), Positives = 259/331 (77%), Gaps = 7/331 (2%)
 Frame = +2

Query: 86   RGRRALAVRASG------DDAFANYKPTIAALFPGQGAQSVGMAKDLVATVPKAKEMFDK 247
            R R +++V A        D  FA+YKPT A LFPGQGAQ+VGM K+   +V  A E++ K
Sbjct: 36   RSRISMSVSAGSQSTTVHDSLFADYKPTSAFLFPGQGAQAVGMGKES-QSVGAAGELYKK 94

Query: 248  ASEILGYDLLKVCVEGPKEKLDSTAVSQPAIYVASLAAVEKLRADEG-QAAIDAIDVACG 424
            A++ILGYDLL +CV GPKEKLDST +SQPAIYV SLAAVE LR  EG +  I+++DV CG
Sbjct: 95   ANDILGYDLLDICVNGPKEKLDSTVISQPAIYVTSLAAVELLRVREGGEQIINSVDVTCG 154

Query: 425  LSLGEYTALAFAGAMSFEDGLRLVKLRGESMQAAADAQPSSMVSVIGLDSAKVAELCKAA 604
            LSLGEYTALAFAGA SFEDGL+LVKLRGE+MQAAADA  S+MVS+IGLDS KV +LC AA
Sbjct: 155  LSLGEYTALAFAGAFSFEDGLKLVKLRGEAMQAAADAAKSAMVSIIGLDSEKVQQLCDAA 214

Query: 605  TEQVGQDKPVQIANYLCPGNYAVSGSKEGCDAVEKLGKSFGARMTVRLAVAGAFHTSYMS 784
             ++V +   VQIANYLCPGNYAVSG  +G + VE   KSF ARMTVRLAVAGAFHTS+M 
Sbjct: 215  NQEVDEADKVQIANYLCPGNYAVSGGLKGIEVVEAKAKSFKARMTVRLAVAGAFHTSFME 274

Query: 785  PAVDKLKAALAQTNIVKPRIPVVSNVDAQPHSDPAVIKDILSRQVTSPVLWENTIKSLQE 964
            PAV +L+AALA T I  PRIPV+SNVDAQPH+DP  IK IL+RQVTSPV WE T+K+L  
Sbjct: 275  PAVSRLEAALAATEIRSPRIPVISNVDAQPHADPDTIKKILARQVTSPVQWETTVKTLLS 334

Query: 965  KGLTKSYEVGPGKVIAGIVKRMDKGANIVNI 1057
            KGL  SYE+GPGKVIAGI KR+DK A+  NI
Sbjct: 335  KGLKSSYELGPGKVIAGIFKRVDKSASFENI 365



EST assemble image


clone accession position
1 LCL091b06_r AV631267 1 215
2 CM049g08_r AV389594 3 408
3 HC094h05_r AV639091 4 463
4 HCL001g10_r AV639607 10 224
5 HC043f02_r AV635229 168 671
6 CM027b11_r AV387659 236 827
7 HC040f07_r AV635000 252 626
8 MXL019c02_r BP094183 445 877
9 HC005c02_r AV632201 446 1057
10 CM054d11_r AV389978 454 765




Chlamydomonas reinhardtii
Kazusa DNA Research Institute