KCC001220A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001220A_C01 KCC001220A_c01
CATCGCTACCTTCCTACACGGAAAGCCTTGTCGGTACCACAGTTCCCGTAACGGTCGAAA
CATGCGTGGTTTGCTACTCGCTTCCTTAGCCCTCGCGCTATTGCTCGGAGCGGCGTTACT
CAATGTCGCTGATGCAGGGAAGGCACATGCTCCGGGCCAACAGAAAAAGAAAAGCCCAAA
GCCCAAGCCGTCTCCTTCGCCAAAGCAGAAGCCCATGAACCCCTTCGCCAAGCTACCCCG
AAACCGGTACGTCATGTCGGCAGACACATGCGCCCCCACCTGCCCCATCAACACCGCCAA
GCCGCTGTGCGCGCTCTTCGAGGACGCGGCCTACGCCCCCGCGGACGCCGGCGCCGCCGA
CTGCAGCACGCTCGTGTCCGAGTCCGGCCTGACCCAGATCGCGGTGGCGGGCGGCCGCCT
CACGGCGCAGCACGGCGCCGATGCGCTGCTGTCCACCATCTGGCCGCTAGAGGCGGAGGA
TGAGGGCGTGGCGGTGGCGGCGGTGGCGCCGAACGGGCAAGGGCAGCTGGGGCATCAAGC
TGGCAAACGGCACCACTGTGGATGGGCCCGCCTACTTCAGTCGCGAGCTGGGCACCGGCT
GCCTCAAGCCAAAGTTCGGCGGCGCGGCGGCGGGGCCGTTCTACCTGTTGGCGTACGAGG
GCCAGGGACTGGAGGACAACACGCTCCGCCTGGTCAACGCCAAGCGCCAGCCGGTTTGGC
GCAGCGGCTCCTGCGACGGCAGCAGCGGCGACGGCTCGCACTAAAGCAACACAGCATCCG
CCACACCGGGGCGTGTGCTCGACCATCCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001220A_C01 KCC001220A_c01
         (809 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_310724.1| ENSANGP00000010257 [Anopheles gambiae] gi|21294...    52  9e-06
pir||T03455 ALR protein - human gi|2358287|gb|AAC51735.1| ALR [H...    52  1e-05
ref|NP_003473.1| myeloid/lymphoid or mixed-lineage leukemia 2; A...    52  1e-05
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote...    49  1e-05
ref|NP_821286.1| hypothetical protein [Streptomyces avermitilis ...    51  3e-05

>ref|XP_310724.1| ENSANGP00000010257 [Anopheles gambiae] gi|21294553|gb|EAA06698.1|
           ENSANGP00000010257 [Anopheles gambiae str. PEST]
          Length = 139

 Score = 52.4 bits (124), Expect = 9e-06
 Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
 Frame = +3

Query: 198 RQSRSP*TPSPSYPETGTSCRQTHAPPPAPSTPPS---RCARSSRTRP--TPPRTPAPPT 362
           R+S S    S   P +G    ++  PPP P+TPPS   R  R+ R  P  + PR    PT
Sbjct: 25  RRSASRRATSTKRPRSGRPPARSPPPPPPPTTPPSGRRRAGRAGRAAPPRSTPRAATAPT 84

Query: 363 AARS---CPSPA*PRSRWRAAASRRSTAPMRCCPPSG 464
           A  S   CP P    +  R++A+ R+  P   C P G
Sbjct: 85  AGSSRPPCPRPRTKMTSARSSATARTLPPAPTCRPPG 121

 Score = 37.7 bits (86), Expect = 0.22
 Identities = 34/105 (32%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
 Frame = +3

Query: 222 PSPSYPETG---TSCRQTHAPPPAPSTPPSRCARSSRTRPTPPRTPAPPTAAR----SCP 380
           PSP+ P +G    SC +  A   A ST   R  R     P PP  P  P + R       
Sbjct: 9   PSPANPRSGGPAASCPRRSASRRATSTKRPRSGRPPARSPPPPPPPTTPPSGRRRAGRAG 68

Query: 381 SPA*PRSRWRAAASRRSTAPMRCCPPSGR*RRRMRAWRWRRWRRT 515
             A PRS  RAA +  + +     PP  R R +M + R     RT
Sbjct: 69  RAAPPRSTPRAATAPTAGSSR---PPCPRPRTKMTSARSSATART 110

 Score = 32.3 bits (72), Expect = 9.3
 Identities = 37/126 (29%), Positives = 45/126 (35%)
 Frame = -3

Query: 762 SASRRRCCRRRSRCAKPAGAWR*PGGACCPPVPGPRTPTGRTAPPPRRRTLA*GSRCPAR 583
           SASRR    +R R  +P      P  +  PP P    P+G      RRR    G   P R
Sbjct: 27  SASRRATSTKRPRSGRP------PARSPPPPPPPTTPPSG------RRRAGRAGRAAPPR 74

Query: 582 D*SRRAHPQWCRLPA*CPSCPCPFGATAATATPSSSASSGQMVDSSASAPCCAVRRPPAT 403
              R A           P CP P        T  +SA S     +   AP C   RPP  
Sbjct: 75  STPRAATAPTAGSSR--PPCPRP-------RTKMTSARSSATARTLPPAPTC---RPPGP 122

Query: 402 AIWVRP 385
           +  + P
Sbjct: 123 STLLPP 128

>pir||T03455 ALR protein - human gi|2358287|gb|AAC51735.1| ALR [Homo sapiens]
          Length = 4957

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 58/188 (30%), Positives = 78/188 (40%), Gaps = 10/188 (5%)
 Frame = +3

Query: 165  KRKAQSPSRLLRQSRSP*TPSP---SYPETGTSCRQTHAPPPA-PSTPPSRCARSSRTRP 332
            KR+    S L ++S +P  P+    +Y  +    RQ  APPP  PS PPS  A S  + P
Sbjct: 4290 KRQLDILSLLKQESPAPEPPTQHRYTYNVSNLDVRQLSAPPPEEPSPPPSPLAPSPASPP 4349

Query: 333  TPP--RTPAPPTAARSCPSPA*PRSRWRAAASRRSTAPMRCCPPSGR*RR--RMRAWRWR 500
            T P    P  P A    PSP    S   +A  +    P    P  G   R  R++ W+  
Sbjct: 4350 TEPLVELPTEPLAEPPVPSPLPLASSPESARPKPRARP----PEEGEDTRPPRLKKWKGV 4405

Query: 501  RWRRTGKGSWGIKLANGTTVD--GPAYFSRELGTGCLKPKFGGAAAGPFYLLAYEGQGLE 674
            RW+R  +    I+  +G   D    A F  +LGT  L+P               EG G  
Sbjct: 4406 RWKRL-RLLLTIQKGSGRQEDEREVAEFMEQLGT-ALRPDKVPRDMRRCCFCHEEGDGAT 4463

Query: 675  DNTLRLVN 698
            D   RL+N
Sbjct: 4464 DGPARLLN 4471

 Score = 37.4 bits (85), Expect = 0.29
 Identities = 28/81 (34%), Positives = 36/81 (43%), Gaps = 2/81 (2%)
 Frame = +3

Query: 204  SRSP*TPSPSYPETGTSCRQTHAPPPAPSTPPSRCARS--SRTRPTPPRTPAPPTAARSC 377
            ++ P TP P  P   + C     P   PS P SR   S  S++    P TP P +A   C
Sbjct: 1799 AQPPLTPRPQPPPPESCCALP--PRSLPSDPFSRVPVSPQSQSSSQSPLTPRPLSAEAFC 1856

Query: 378  PSPA*PRSRWRAAASRRSTAP 440
            PSP  PR +     SR  + P
Sbjct: 1857 PSPVTPRFQSPDPYSRPPSRP 1877

 Score = 35.0 bits (79), Expect = 1.4
 Identities = 35/120 (29%), Positives = 43/120 (35%), Gaps = 10/120 (8%)
 Frame = -3

Query: 675 PPV---PGPRTPTGRTAP------PPRRRTLA*GSRCPARD*SRRAHPQWCRLPA*CPSC 523
           PP+   P P +P G  +P      PP+   L   S  P     + + P  C  PA   S 
Sbjct: 417 PPMILPPSPGSPVGPASPILMEPLPPQCSPLLQHSLVP-----QNSPPSQCSPPALPLSV 471

Query: 522 PCPFGATAATATPSSSASSGQMVDSSASAPCCAVRRPPATAIWVRPDSDTSV-LQSAAPA 346
           P P          S  A   +M     S P C    P AT+    P  D S    S APA
Sbjct: 472 PSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPSATSPLPSPMGDLSCPAPSPAPA 531

>ref|NP_003473.1| myeloid/lymphoid or mixed-lineage leukemia 2; ALL1-related gene [Homo
            sapiens] gi|7460240|pir||T03454 ALR protein - human
            gi|2358285|gb|AAC51734.1| ALR [Homo sapiens]
          Length = 5262

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 58/188 (30%), Positives = 78/188 (40%), Gaps = 10/188 (5%)
 Frame = +3

Query: 165  KRKAQSPSRLLRQSRSP*TPSP---SYPETGTSCRQTHAPPPA-PSTPPSRCARSSRTRP 332
            KR+    S L ++S +P  P+    +Y  +    RQ  APPP  PS PPS  A S  + P
Sbjct: 4595 KRQLDILSLLKQESPAPEPPTQHRYTYNVSNLDVRQLSAPPPEEPSPPPSPLAPSPASPP 4654

Query: 333  TPP--RTPAPPTAARSCPSPA*PRSRWRAAASRRSTAPMRCCPPSGR*RR--RMRAWRWR 500
            T P    P  P A    PSP    S   +A  +    P    P  G   R  R++ W+  
Sbjct: 4655 TEPLVELPTEPLAEPPVPSPLPLASSPESARPKPRARP----PEEGEDTRPPRLKKWKGV 4710

Query: 501  RWRRTGKGSWGIKLANGTTVD--GPAYFSRELGTGCLKPKFGGAAAGPFYLLAYEGQGLE 674
            RW+R  +    I+  +G   D    A F  +LGT  L+P               EG G  
Sbjct: 4711 RWKRL-RLLLTIQKGSGRQEDEREVAEFMEQLGT-ALRPDKVPRDMRRCCFCHEEGDGAT 4768

Query: 675  DNTLRLVN 698
            D   RL+N
Sbjct: 4769 DGPARLLN 4776

 Score = 37.4 bits (85), Expect = 0.29
 Identities = 28/81 (34%), Positives = 36/81 (43%), Gaps = 2/81 (2%)
 Frame = +3

Query: 204  SRSP*TPSPSYPETGTSCRQTHAPPPAPSTPPSRCARS--SRTRPTPPRTPAPPTAARSC 377
            ++ P TP P  P   + C     P   PS P SR   S  S++    P TP P +A   C
Sbjct: 2104 AQPPLTPRPQPPPPESCCALP--PRSLPSDPFSRVPVSPQSQSSSQSPLTPRPLSAEAFC 2161

Query: 378  PSPA*PRSRWRAAASRRSTAP 440
            PSP  PR +     SR  + P
Sbjct: 2162 PSPVTPRFQSPDPYSRPPSRP 2182

 Score = 35.0 bits (79), Expect = 1.4
 Identities = 35/120 (29%), Positives = 43/120 (35%), Gaps = 10/120 (8%)
 Frame = -3

Query: 675  PPV---PGPRTPTGRTAP------PPRRRTLA*GSRCPARD*SRRAHPQWCRLPA*CPSC 523
            PP+   P P +P G  +P      PP+   L   S  P     + + P  C  PA   S 
Sbjct: 722  PPMILPPSPGSPVGPASPILMEPLPPQCSPLLQHSLVP-----QNSPPSQCSPPALPLSV 776

Query: 522  PCPFGATAATATPSSSASSGQMVDSSASAPCCAVRRPPATAIWVRPDSDTSV-LQSAAPA 346
            P P          S  A   +M     S P C    P AT+    P  D S    S APA
Sbjct: 777  PSPLSPIGKVVGVSDEAELHEMETEKVSEPECPALEPSATSPLPSPMGDLSCPAPSPAPA 836

>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
           plenty-of-prolines-101; serine/arginine repetitive
           matrix protein 1 [Rattus norvegicus]
          Length = 958

 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 36/101 (35%), Positives = 45/101 (43%)
 Frame = +3

Query: 165 KRKAQSPSRLLRQSRSP*TPSPSYPETGTSCRQTHAPPPAPSTPPSRCARSSRTRPTPPR 344
           +R+  SPSR         +PSP   +  TS R+      +PS PP+R  RS    P PP 
Sbjct: 568 RRRRHSPSRSA-------SPSPRKRQKETSPRRRRR---SPSPPPARRRRSPS--PAPPP 615

Query: 345 TPAPPTAARSCPSPA*PRSRWRAAASRRSTAPMRCCPPSGR 467
            P PP   R  P+P   R        RRS +P R  PP  R
Sbjct: 616 PPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQR 656

 Score = 46.2 bits (108), Expect = 6e-04
 Identities = 43/129 (33%), Positives = 57/129 (43%), Gaps = 8/129 (6%)
 Frame = +3

Query: 84  P*PSRYCSERRYSMSLMQGRHMLRANRKRKAQSPSRLLRQSRSP*TPSPSYPETGTSCRQ 263
           P P R  S RR +      R M    R R+++SP R  R+S +  + S S   +  S   
Sbjct: 372 PSPRRRPSPRRRTPP----RRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSP 427

Query: 264 THAPPPAPSTPPSRCARSS--------RTRPTPPRTPAPPTAARSCPSPA*PRSRWRAAA 419
              PP   S+PP +  R S        R RP+ P TP P T  R  P+   P+   RA  
Sbjct: 428 PKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKT--RHSPT---PQQSNRARK 482

Query: 420 SRRSTAPMR 446
           SR S +P R
Sbjct: 483 SRVSVSPGR 491

 Score = 45.1 bits (105), Expect = 0.001
 Identities = 52/198 (26%), Positives = 76/198 (38%), Gaps = 17/198 (8%)
 Frame = +3

Query: 96   RYCSERRYSMSLMQGRHMLRANRKRKAQSPSRLLRQSRSP*TPSPSYPETGTSCRQTHAP 275
            R+   R  S S  + +      R+R++ SP    R+ RSP    P  P      R++  P
Sbjct: 571  RHSPSRSASPSPRKRQKETSPRRRRRSPSPPP-ARRRRSPSPAPPPPPPPPPRRRRSPTP 629

Query: 276  PP---APSTPPSRCARSSRT---------RPTPP-----RTPAPPTAARSCPSPA*PRSR 404
            PP    PS PP R + S R           P+PP      +P PP   R+ PSP  P+ R
Sbjct: 630  PPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP-PKRR 688

Query: 405  WRAAASRRSTAPMRCCPPSGR*RRRMRAWRWRRWRRTGKGSWGIKLANGTTVDGPAYFSR 584
                    S  P +  PP  + R    + + R+    G+ +   +         P+   R
Sbjct: 689  -----VSHSPPPKQRSPPVTKRRSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPR 743

Query: 585  ELGTGCLKPKFGGAAAGP 638
               T    P   GA+A P
Sbjct: 744  APQTSSPPPVRRGASASP 761

 Score = 43.9 bits (102), Expect = 0.003
 Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
 Frame = +3

Query: 156  ANRKRKAQSPSRLLRQSRSP*TPSPSYPETGTSCRQTHAPPP----APSTPPSRCARSSR 323
            +++ RK  SP R  R++RSP       P       QT +PPP    A ++P  R + S  
Sbjct: 711  SSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQSPSPS 770

Query: 324  TRP--TPPRTPAPPTAARSCPSPA*PRSRWRAAASR------RSTAPMRCCPPS 461
            TRP     RTP P    ++  SP+ P+S  R ++SR        TA     PPS
Sbjct: 771  TRPIRRVSRTPEPKKIKKAA-SPS-PQSVRRVSSSRSVSGSPEPTAKKPPAPPS 822

 Score = 43.1 bits (100), Expect = 0.005
 Identities = 36/95 (37%), Positives = 44/95 (45%), Gaps = 3/95 (3%)
 Frame = +3

Query: 111 RRYSMSLMQGRHMLRANRKRKAQSPSRLLRQSRSP*TPSPSYPETGTSCRQTHAPPPAPS 290
           RR+S S    R    + RKR+ ++  R  R+S SP       P        + APPP P 
Sbjct: 570 RRHSPS----RSASPSPRKRQKETSPRRRRRSPSP-------PPARRRRSPSPAPPPPPP 618

Query: 291 TPPSRCARSSRTRPTPP---RTPAPPTAARSCPSP 386
            PP R     R  PTPP   RTP+PP   R  PSP
Sbjct: 619 PPPRR-----RRSPTPPPRRRTPSPPPR-RRSPSP 647

 Score = 42.4 bits (98), Expect = 0.009
 Identities = 32/77 (41%), Positives = 36/77 (46%)
 Frame = -1

Query: 530 PAALARSAPPPPPPRPHPPPLAARWWTAAHRRRAAP*GGRPPPRSGSGRTRTRACCSRRR 351
           PA   RS  P PPP P PPP   R  T   RRR       PPPR  S   R  +   +RR
Sbjct: 602 PARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTP----SPPPRRRSPSPRRYSPPIQRR 657

Query: 350 RRPRGRRPRPRRARTAA 300
             P    P P+R RTA+
Sbjct: 658 YSP---SPPPKR-RTAS 670

 Score = 36.6 bits (83), Expect(2) = 1e-05
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
 Frame = -1

Query: 533 APAALARSAPPPPPPR----PHPPPLAARWWTAAHRRRAAP*GGRPPP------RSGSGR 384
           +P    R+A PPPPP+    P PPP      +   ++R+ P   R  P      R GS  
Sbjct: 661 SPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTKRRSPSLSSKHRKGSSP 720

Query: 383 TR-TRACCSRRRRRPRGRRPRPRRARTAA 300
            R TR   S +  +     PRPR  +T++
Sbjct: 721 GRSTREARSPQPNKRHSPSPRPRAPQTSS 749

 Score = 35.0 bits (79), Expect = 1.4
 Identities = 31/91 (34%), Positives = 43/91 (47%)
 Frame = +3

Query: 165 KRKAQSPSRLLRQSRSP*TPSPSYPETGTSCRQTHAPPPAPSTPPSRCARSSRTRPTPPR 344
           + +++S SR   +SRSP    P       S  ++++P   PS  P R  R S  R TPPR
Sbjct: 334 RSRSRSKSRSRTRSRSPSHTRPRRRHRSRS--RSYSPRRRPS--PRR--RPSPRRRTPPR 387

Query: 345 TPAPPTAARSCPSPA*PRSRWRAAASRRSTA 437
              PP   R   SP   R R  A+ S  S++
Sbjct: 388 RMPPPPRHRRSRSPGRRRRRSSASLSGSSSS 418

 Score = 34.7 bits (78), Expect(2) = 1e-05
 Identities = 20/42 (47%), Positives = 20/42 (47%)
 Frame = -3

Query: 738 RRRSRCAKPAGAWR*PGGACCPPVPGPRTPTGRTAPPPRRRT 613
           RRRS    PA   R P  A  PP P P        PPPRRRT
Sbjct: 594 RRRSPSPPPARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRT 635

 Score = 34.3 bits (77), Expect = 2.5
 Identities = 36/118 (30%), Positives = 51/118 (42%), Gaps = 3/118 (2%)
 Frame = +3

Query: 135 QGRHMLRANRKRKAQSPSRLLRQSRSP*T-PSPSYPETGTSCRQTHAPPPAPSTPPSRCA 311
           +G  M  A+  ++ +   R  +QS S    P  S+ + G   R+    P   ++P  R  
Sbjct: 526 KGSKMAAADSVQQRRQYRRQNQQSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKR 585

Query: 312 RSSRTRPTPPRTPAPPTA-ARSCPSPA*PRSRWRAAASRRS-TAPMRCCPPSGR*RRR 479
           +   +     R+P+PP A  R  PSPA P         RRS T P R   PS   RRR
Sbjct: 586 QKETSPRRRRRSPSPPPARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRR 643

 Score = 28.9 bits (63), Expect(2) = 2.1
 Identities = 21/78 (26%), Positives = 31/78 (38%)
 Frame = -1

Query: 533 APAALARSAPPPPPPRPHPPPLAARWWTAAHRRRAAP*GGRPPPRSGSGRTRTRACCSRR 354
           +P    R +  PPP +  PP    R  + + + R     GR    + S +   R   S R
Sbjct: 682 SPPPKRRVSHSPPPKQRSPPVTKRRSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPR 741

Query: 353 RRRPRGRRPRPRRARTAA 300
            R P+   P P R   +A
Sbjct: 742 PRAPQTSSPPPVRRGASA 759

 Score = 27.7 bits (60), Expect(2) = 1.3
 Identities = 15/30 (50%), Positives = 15/30 (50%)
 Frame = -3

Query: 672 PVPGPRTPTGRTAPPPRRRTLA*GSRCPAR 583
           P P  RTP  R  PPPR R     SR P R
Sbjct: 378 PSPRRRTPPRRMPPPPRHRR----SRSPGR 403

 Score = 26.2 bits (56), Expect(2) = 1.3
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = -1

Query: 518 ARSAPPPPPPRPHPPPLAARWWT---AAHRRRAAP*G-GRPPPRSGSGRTRTRACCSRRR 351
           +RS P  PP R   PP   R  +   +  RRR  P     PPP++    T  ++  +R+ 
Sbjct: 424 SRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQSNRARKS 483

Query: 350 R 348
           R
Sbjct: 484 R 484

 Score = 24.3 bits (51), Expect(2) = 2.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 672 PVPGPRTPTGRTAPPPRRR 616
           P P P+  T    PPP+RR
Sbjct: 660 PSPPPKRRTASPPPPPKRR 678

>ref|NP_821286.1| hypothetical protein [Streptomyces avermitilis MA-4680]
           gi|29603748|dbj|BAC67821.1| hypothetical protein
           [Streptomyces avermitilis MA-4680]
          Length = 844

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 30/83 (36%), Positives = 44/83 (52%), Gaps = 1/83 (1%)
 Frame = +3

Query: 210 SP*TPSPSYPETGTSCRQTHAPPP-APSTPPSRCARSSRTRPTPPRTPAPPTAARSCPSP 386
           SP   SP+ P    S     +P P A +T PS  A S+ T P+PP++P P T   +C +P
Sbjct: 736 SPPGTSPTPPSPPNSSSANSSPTPSATATHPSNSASSTTTTPSPPKSPTPATPPPTCAAP 795

Query: 387 A*PRSRWRAAASRRSTAPMRCCP 455
           A P ++  AA+S  + +P    P
Sbjct: 796 A-PTTKEDAASSSSANSPNAGAP 817

 Score = 38.1 bits (87), Expect = 0.17
 Identities = 41/139 (29%), Positives = 53/139 (37%), Gaps = 12/139 (8%)
 Frame = -3

Query: 681  CCPPVPGPRTPTGRTAPPPRRRTLA*GSRCPARD*SRRAH---PQWCRLPA*CPSCPCPF 511
            C P  P   +P+   AP P   T +  S  P    S   H   P     P   P+ P P 
Sbjct: 689  CSPTAPTTTSPSSSPAPAPSTPTKSPPSTSPPTPPSSPKHANTPPPNSPPGTSPTPPSPP 748

Query: 510  GATAA--------TAT-PSSSASSGQMVDSSASAPCCAVRRPPATAIWVRPDSDTSVLQS 358
             +++A        TAT PS+SASS     S   +P  A   P   A       D +   S
Sbjct: 749  NSSSANSSPTPSATATHPSNSASSTTTTPSPPKSPTPATPPPTCAAPAPTTKEDAASSSS 808

Query: 357  AAPASAGA*AASSKSAHSG 301
            A   +AGA A    +  SG
Sbjct: 809  ANSPNAGAPATPPPAKPSG 827

 Score = 38.1 bits (87), Expect = 0.17
 Identities = 21/59 (35%), Positives = 29/59 (48%)
 Frame = +3

Query: 219 TPSPSYPETGTSCRQTHAPPPAPSTPPSRCARSSRTRPTPPRTPAPPTAARSCPSPA*P 395
           TPSP+ P T T      +PP +P+ P       + T P+    PAP T  +S PS + P
Sbjct: 669 TPSPAPPTTSTPSATESSPPCSPTAP-------TTTSPSSSPAPAPSTPTKSPPSTSPP 720

 Score = 37.4 bits (85), Expect = 0.29
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
 Frame = +3

Query: 210 SP*TPSPSYPETGTSCRQT---HAPPPAPSTPPSRCARSSRTRPTPPRTPAPPTAARSCP 380
           +P TP+ S P T      +   HA  P P++PP        T PTPP +P   ++A S P
Sbjct: 706 APSTPTKSPPSTSPPTPPSSPKHANTPPPNSPPG-------TSPTPP-SPPNSSSANSSP 757

Query: 381 SPA*PRSRWRAAASRRSTAP 440
           +P+   +    +AS  +T P
Sbjct: 758 TPSATATHPSNSASSTTTTP 777

 Score = 36.2 bits (82), Expect = 0.65
 Identities = 25/92 (27%), Positives = 37/92 (40%)
 Frame = +3

Query: 186 SRLLRQSRSP*TPSPSYPETGTSCRQTHAPPPAPSTPPSRCARSSRTRPTPPRTPAPPTA 365
           ++L   + SP TP+ S     T+  +       PS  P   +  S T  +PP +P  PT 
Sbjct: 637 TQLPEAASSPSTPTDSSKPATTTSTKASTKCSTPSPAPPTTSTPSATESSPPCSPTAPTT 696

Query: 366 ARSCPSPA*PRSRWRAAASRRSTAPMRCCPPS 461
                SPA        A S  + +P    PP+
Sbjct: 697 TSPSSSPA-------PAPSTPTKSPPSTSPPT 721



EST assemble image


clone accession position
1 CM027h01_r AV387589 1 620
2 CM027b02_r AV387645 1 614
3 LCL022a06_r AV627159 1 376
4 LC016d12_r AV620023 255 602
5 CM038h11_r AV389019 436 821




Chlamydomonas reinhardtii
Kazusa DNA Research Institute