KCC001208A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001208A_C02 KCC001208A_c02
TCGCCCACACACCAGATCAGGAACTTGTCAGTTCCTATCTGTCCAGCAAAATGGCCCTGG
CTATCCGCTCCTCCCTGGCGCGCGGCCGCGATGGGCCGCAAGGGCCTTCCGCCAGGCCGT
GCCTGTGCGCGTCGCCCCCGGCCCAACGCGTGCGCTCGGTGACCACTGCCAGCGCTGAGA
TCACTGCTTACAGCGTGGAGGAGAAGGGCCCCAAGGGACTCCCTGGAGTACCGCATGTTC
TTCAAGCAGGGCTGCCAAGGAGGTGTCGTGCTGGCACGAGATCCCCCTTTACGCCGGTGA
CGGCCACCTGCACTACATCTGCGAGATCCCCAAGGAGACCTCGGCCAAGATGGAGGTCGC
CACGGACGAGCCCCGCACCCCCATCAAGCAGGACGTGAAGAAGGGCAAGCTCCGCTTCTA
CCCGTACAACATCAACTGGAACTACGGCATGCTGCCCCAGACCTGGGAGGACCCCGGCCA
CACCGACGCCACCCTGGGCGCCGCGGGTGACAACGACCCGGTTGATGTTGTGGAGATCGG
TGCTGCCGCTGCTAAGCGCGGCGGTGTGTACAAGGTCAAGCCCGTGGGCGTGCTGGCCAT
GATCGACGACGGCGAGCTGGACTGGAAGGTCATCGCCATCTCCGCTGACGACCCGAAGGC
GGCTCTGTGCAACGACGTCGAGGACGTGGAGAAGCACTTCCCGGGTGAGATCCAGAAGGT
CCTGGAGTGGTTCCGGGACTACAAAATCCCTGACGGCAAGCCCGCCAACAAGTTTGGCTA
CGACAACAAGTGCATGAACAAGGAGTTCACCCTGAACGTGATCAAGGAGACCCACGAGGC
CTACGTCAAGCTCAAGTCGGGCGCCCGCGCCAACTCTGAGGAGCTGTCCCTGATCTAAGT
AACCCCGTGTGATGCAGCTTGAGGTCTAATGCGCCGCAGTGGCTGGTGGGGCTGCCGGGA
CCTGGTGTTCGCTTTTTGATTTGGCGTCTTGTGCATAACAGCATGCGCGGCGTGTGCTGG
TCGTAGCGTTGCGGGGATATCAGCGGTGCATGGTTGCAGCACAGGTTCCGTACCATATGC
ACGGAAGTTTTTCCTCTGCGCCTGTGCAGTGCGCGTGCACTACATGCGTGTAACACCCCG
CAagacagt


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001208A_C02 KCC001208A_c02
         (1149 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAC42762.1| inorganic pyrophosphatase precursor [Chlamydomon...   459  e-128
ref|NP_196527.1| inorganic pyrophosphatase - like protein [Arabi...   290  2e-77
gb|AAM64828.1| inorganic pyrophosphatase-like protein [Arabidops...   287  2e-76
ref|XP_215416.2| similar to RIKEN cDNA 2010317E03 [Rattus norveg...   233  5e-60
gb|AAH54303.1| Unknown (protein for IMAGE:6880302) [Xenopus laevis]   228  6e-60

>emb|CAC42762.1| inorganic pyrophosphatase precursor [Chlamydomonas reinhardtii]
          Length = 280

 Score =  459 bits (1182), Expect = e-128
 Identities = 228/265 (86%), Positives = 233/265 (87%)
 Frame = +2

Query: 101 RAFRQAVPVRVAPGPTRALGDHCQR*DHCLQRGGEGPQGTPWSTACSSSRAAKEVSCWHE 280
           +AFRQAVPVRVAP                     +GP+ +         + AKEVSCWHE
Sbjct: 17  KAFRQAVPVRVAPAQRVRSVTTASAEITAYSVEEKGPKDS-LEYRMFFKQGAKEVSCWHE 75

Query: 281 IPLYAGDGHLHYICEIPKETSAKMEVATDEPRTPIKQDVKKGKLRFYPYNINWNYGMLPQ 460
           IPLYAGDGHLHYICEIPKETSAKMEVATDEPRTPIKQDVKKGKLRFYPYNINWNYGMLPQ
Sbjct: 76  IPLYAGDGHLHYICEIPKETSAKMEVATDEPRTPIKQDVKKGKLRFYPYNINWNYGMLPQ 135

Query: 461 TWEDPGHTDATLGAAGDNDPVDVVEIGAAAAKRGGVYKVKPVGVLAMIDDGELDWKVIAI 640
           TWEDPGHTDATLGAAGDNDPVDVVEIGAAAAKRGGVYKVKPVGVLAMIDDGELDWKVIAI
Sbjct: 136 TWEDPGHTDATLGAAGDNDPVDVVEIGAAAAKRGGVYKVKPVGVLAMIDDGELDWKVIAI 195

Query: 641 SADDPKAALCNDVEDVEKHFPGEIQKVLEWFRDYKIPDGKPANKFGYDNKCMNKEFTLNV 820
           SADDPKAALCNDVEDVEKHFPGEIQKVLEWFRDYKIPDGKPANKFGYDNKCMNKEFTLNV
Sbjct: 196 SADDPKAALCNDVEDVEKHFPGEIQKVLEWFRDYKIPDGKPANKFGYDNKCMNKEFTLNV 255

Query: 821 IKETHEAYVKLKSGARANSEELSLI 895
           IKETHEAYVKLKSGARANSEELSLI
Sbjct: 256 IKETHEAYVKLKSGARANSEELSLI 280

 Score = 60.1 bits (144), Expect = 7e-08
 Identities = 39/56 (69%), Positives = 40/56 (70%), Gaps = 1/56 (1%)
 Frame = +3

Query: 51  MALAIRSSLARGRDGPQG-PSARPCLCASPPAQRVRSVTTASAEITAYSVEEKGPK 215
           MALAIRSSL     G +    A P   A  PAQRVRSVTTASAEITAYSVEEKGPK
Sbjct: 1   MALAIRSSLRAAAMGRKAFRQAVPVRVA--PAQRVRSVTTASAEITAYSVEEKGPK 54

 Score = 40.4 bits (93), Expect = 0.058
 Identities = 28/64 (43%), Positives = 35/64 (53%), Gaps = 4/64 (6%)
 Frame = +1

Query: 79  RAAAMGRKG----LPPGRACARRPRPNACAR*PLPALRSLLTAWRRRAPRDSLEYRMFFK 246
           RAAAMGRK     +P   A A+R R    A   + A      +   + P+DSLEYRMFFK
Sbjct: 10  RAAAMGRKAFRQAVPVRVAPAQRVRSVTTASAEITAY-----SVEEKGPKDSLEYRMFFK 64

Query: 247 QGCQ 258
           QG +
Sbjct: 65  QGAK 68

>ref|NP_196527.1| inorganic pyrophosphatase - like protein [Arabidopsis thaliana]
           gi|11358468|pir||T49933 inorganic pyrophosphatase-like
           protein - Arabidopsis thaliana
           gi|7671424|emb|CAB89365.1| inorganic
           pyrophosphatase-like protein [Arabidopsis thaliana]
           gi|9758993|dbj|BAB09520.1| inorganic
           pyrophosphatase-like protein [Arabidopsis thaliana]
           gi|12057177|emb|CAC19853.1| inorganic pyrophosphatase
           [Arabidopsis thaliana] gi|15028285|gb|AAK76619.1|
           putative inorganic pyrophosphatase [Arabidopsis
           thaliana] gi|19310711|gb|AAL85086.1| putative inorganic
           pyrophosphatase [Arabidopsis thaliana]
          Length = 300

 Score =  290 bits (743), Expect = 2e-77
 Identities = 133/202 (65%), Positives = 162/202 (79%), Gaps = 1/202 (0%)
 Frame = +2

Query: 251 AAKEVSCWHEIPLYAGDGHLHYICEIPKETSAKMEVATDEPRTPIKQDVKKGKLRFYPYN 430
           + K+VS WH+IPL  GDG  ++I EIPKE+ AKMEVATDE  TPIKQD KKGKLR+YPYN
Sbjct: 86  SGKKVSPWHDIPLTLGDGVFNFIVEIPKESKAKMEVATDEDFTPIKQDTKKGKLRYYPYN 145

Query: 431 INWNYGMLPQTWEDPGHTDATL-GAAGDNDPVDVVEIGAAAAKRGGVYKVKPVGVLAMID 607
           INWNYG+LPQTWEDP H ++ + G  GDNDPVDVVEIG    K G + K+KP+  LAMID
Sbjct: 146 INWNYGLLPQTWEDPSHANSEVEGCFGDNDPVDVVEIGETQRKIGDILKIKPLAALAMID 205

Query: 608 DGELDWKVIAISADDPKAALCNDVEDVEKHFPGEIQKVLEWFRDYKIPDGKPANKFGYDN 787
           +GELDWK++AIS DDPKA L NDVEDVEKHFPG +  + +WFRDYKIPDGKPAN+FG  +
Sbjct: 206 EGELDWKIVAISLDDPKAHLVNDVEDVEKHFPGTLTAIRDWFRDYKIPDGKPANRFGLGD 265

Query: 788 KCMNKEFTLNVIKETHEAYVKL 853
           K  NK++ L +I+ET+E++ KL
Sbjct: 266 KPANKDYALKIIQETNESWAKL 287

>gb|AAM64828.1| inorganic pyrophosphatase-like protein [Arabidopsis thaliana]
          Length = 300

 Score =  287 bits (735), Expect = 2e-76
 Identities = 131/202 (64%), Positives = 161/202 (78%), Gaps = 1/202 (0%)
 Frame = +2

Query: 251 AAKEVSCWHEIPLYAGDGHLHYICEIPKETSAKMEVATDEPRTPIKQDVKKGKLRFYPYN 430
           + K+VS WH+IPL  GDG  ++I EIPKE+ AKMEVATDE  TPIKQD KKGKLR+YPYN
Sbjct: 86  SGKKVSPWHDIPLTLGDGVFNFIVEIPKESKAKMEVATDEDFTPIKQDTKKGKLRYYPYN 145

Query: 431 INWNYGMLPQTWEDPGHTDATL-GAAGDNDPVDVVEIGAAAAKRGGVYKVKPVGVLAMID 607
           INWNYG+LPQTWEDP H ++ + G  GDNDPVDVVEIG    K G +  +KP+  LAMID
Sbjct: 146 INWNYGLLPQTWEDPSHANSEVEGCFGDNDPVDVVEIGETQRKIGDILNIKPLAALAMID 205

Query: 608 DGELDWKVIAISADDPKAALCNDVEDVEKHFPGEIQKVLEWFRDYKIPDGKPANKFGYDN 787
           +GELDWK++AIS DDPKA L NDVEDVEKHFPG +  + +WFRDYKIPDGKPAN+FG  +
Sbjct: 206 EGELDWKIVAISLDDPKAHLVNDVEDVEKHFPGTLTAIRDWFRDYKIPDGKPANRFGLGD 265

Query: 788 KCMNKEFTLNVIKETHEAYVKL 853
           K  N+++ L +I+ET+E++ KL
Sbjct: 266 KPANRDYALKIIQETNESWAKL 287

>ref|XP_215416.2| similar to RIKEN cDNA 2010317E03 [Rattus norvegicus]
          Length = 289

 Score =  233 bits (594), Expect = 5e-60
 Identities = 105/202 (51%), Positives = 146/202 (71%), Gaps = 5/202 (2%)
 Frame = +2

Query: 263 VSCWHEIPLYAGDGHLHYICEIPKETSAKMEVATDEPRTPIKQDVKKGKLRF----YPYN 430
           +S +H++P+YA     H + E+P+ ++AKME+AT +P  PIKQDVKKGKLR+    +PY 
Sbjct: 29  ISPFHDVPIYADKDVFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYK 88

Query: 431 -INWNYGMLPQTWEDPGHTDATLGAAGDNDPVDVVEIGAAAAKRGGVYKVKPVGVLAMID 607
              WNYG +PQTWEDPGH+D   G  GDNDP+DV EIG+    RG + +VK +G+LAMID
Sbjct: 89  GYIWNYGAIPQTWEDPGHSDEHTGCCGDNDPIDVCEIGSKVCARGEIIRVKVLGILAMID 148

Query: 608 DGELDWKVIAISADDPKAALCNDVEDVEKHFPGEIQKVLEWFRDYKIPDGKPANKFGYDN 787
           +GE DWKVIAI+ DDP AA  +D+ DVE+  PG ++  ++WFR YK+PDGKP N+F ++ 
Sbjct: 149 EGETDWKVIAINVDDPDAANYHDISDVERLKPGYLEATVDWFRRYKVPDGKPENEFAFNA 208

Query: 788 KCMNKEFTLNVIKETHEAYVKL 853
           +  NKEF +++IK TH+ +  L
Sbjct: 209 EFKNKEFAVDIIKNTHDYWKAL 230

>gb|AAH54303.1| Unknown (protein for IMAGE:6880302) [Xenopus laevis]
          Length = 308

 Score =  228 bits (581), Expect(2) = 6e-60
 Identities = 108/225 (48%), Positives = 157/225 (69%), Gaps = 7/225 (3%)
 Frame = +2

Query: 263 VSCWHEIPLYAGDGH--LHYICEIPKETSAKMEVATDEPRTPIKQDVKKGKLRF----YP 424
           +S +H+IP++A +     + + E+P+ T+AKME+AT +P  PIKQDVKKGKLR+    +P
Sbjct: 47  ISPFHDIPMFADEAKAIFNMVVEVPRWTNAKMEIATKDPLNPIKQDVKKGKLRYVANVFP 106

Query: 425 YN-INWNYGMLPQTWEDPGHTDATLGAAGDNDPVDVVEIGAAAAKRGGVYKVKPVGVLAM 601
           +    WNYG LPQTWE+P H D   G  GDNDP+DV +IG+   +RG V KVK +G LA+
Sbjct: 107 HKGYIWNYGALPQTWENPTHIDENTGFGGDNDPIDVCDIGSKVCERGEVIKVKILGTLAL 166

Query: 602 IDDGELDWKVIAISADDPKAALCNDVEDVEKHFPGEIQKVLEWFRDYKIPDGKPANKFGY 781
           ID+GE DWK+IAI+ADDP+A+L ND+ED+ +  P  ++  ++WFR YK+PDGKP N+F +
Sbjct: 167 IDEGETDWKIIAINADDPEASLYNDIEDIRRLKPNYLESTVDWFRRYKVPDGKPENQFAF 226

Query: 782 DNKCMNKEFTLNVIKETHEAYVKLKSGARANSEELSLI*VTPCDA 916
           D +  NK+F +N+IK THE +  L +  +    E++ + VT  D+
Sbjct: 227 DAEFKNKDFAINIIKSTHEHWKALVT-KKVEGGEINCVNVTVQDS 270

 Score = 26.6 bits (57), Expect(2) = 6e-60
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 202 RRAPRDSLEYRMFFKQGCQG 261
           +RA  +SLEYR+FFK  C+G
Sbjct: 26  QRAKANSLEYRLFFK-NCKG 44



EST assemble image


clone accession position
1 HC021a07_r AV633457 1 605
2 LC087b12_r AV625054 5 623
3 MX221f01_r BP090288 9 448
4 HC099b03_r AV639420 10 550
5 MX019e03_r BP086882 11 588
6 HC075c11_r AV637608 13 513
7 MX030h10_r BP087293 14 504
8 LC058h05_r AV623097 32 654
9 LC059h07_r AV623170 39 656
10 CM026c06_r AV387533 90 721
11 HC001d03_r AV631893 94 642
12 HC091d09_r AV638833 95 508
13 HC009b09_r AV632513 95 628
14 HC079a04_r AV637891 95 550
15 MX002c10_r BP086123 95 416
16 MX011c07_r BP086551 98 380
17 HC088d02_r AV638596 98 541
18 HC073a06_r AV637426 98 633
19 MX036g05_r BP087537 98 478
20 HC066e07_r AV636947 98 560
21 MX214a10_r BP089797 98 511
22 HC022b12_r AV633556 98 493
23 MX024c05_r BP087063 98 521
24 LC081e07_r AV624710 99 600
25 LC050b02_r AV622464 99 639
26 LC005b07_r AV619208 99 660
27 CM072e03_r AV391445 99 576
28 MX248h02_r BP092035 99 446
29 MX060c01_r BP088426 99 447
30 LC080f10_r AV624647 100 623
31 LC096b01_r AV625659 100 557
32 CM075f02_r AV391651 100 722
33 LC028a04_r AV620876 100 628
34 HC066c01_r AV636930 101 552
35 MX250a12_r BP092127 102 550
36 HC017b09_r AV633134 102 634
37 HC040d06_r AV634979 102 653
38 HC022h09_r AV633610 102 611
39 HC082h10_r AV638181 102 547
40 LC039h05_r AV621702 102 638
41 LC013a03_r AV619772 103 622
42 HC001e11_r AV631907 103 639
43 LC080f07_r AV624644 103 651
44 HC026d03_r AV633873 104 580
45 HC027b10_r AV633937 104 643
46 HC066g07_r AV636964 104 572
47 MX235h10_r BP091245 104 414
48 LC038g04_r AV621631 105 628
49 HC082d12_r AV638139 106 543
50 HC036b05_r AV634658 106 615
51 CM091b08_r AV397541 106 632
52 HC017h06_r AV633195 106 576
53 HC018c05_r AV633225 108 589
54 HC003a08_r AV632029 108 594
55 HC014d04_r AV632919 108 621
56 LC004c05_r AV619132 109 651
57 LC088d11_r AV625143 109 465
58 MX241d10_r BP091592 109 587
59 MX104c08_r BP089055 109 607
60 HC015h08_r AV633035 110 607
61 HC008f12_r AV632476 110 620
62 MX103c09_r BP088972 110 541
63 HC084c07_r AV638276 110 638
64 HC024h06_r AV633758 110 582
65 LC080g09_r AV624653 110 638
66 MX217h09_r BP090042 111 437
67 HC093d05_r AV638981 111 532
68 HC034d04_r AV634512 111 607
69 LC019e04_r AV620245 111 625
70 MX029f09_r BP087270 111 495
71 HC094g06_r AV639081 112 517
72 MX255d07_r BP092527 112 584
73 MX053a12_r BP088164 113 609
74 MX034d12_r BP087435 115 510
75 HC079g06_r AV637947 116 569
76 HC080b05_r AV637974 116 579
77 MX016f08_r BP086780 116 598
78 MX210b04_r BP089581 116 572
79 HC012d02_r AV632769 116 624
80 LC046b11_r AV622179 116 622
81 MX033a11_r BP087364 116 623
82 HC058g03_r AV636379 116 509
83 HC078f08_r AV637868 116 634
84 HC083b09_r AV638199 116 581
85 HC016f11_r AV633095 116 638
86 MX006b02_r BP086298 116 550
87 HC097c10_r AV639281 117 550
88 MX019h02_r BP086903 118 544
89 HC039g11_r AV634933 118 611
90 LC100g03_r AV625987 118 503
91 MX241e05_r BP091597 118 523
92 HC081e10_r AV638074 118 572
93 HC033f09_r AV634461 118 616
94 MX052f04_r BP088140 119 611
95 HC001e08_r AV631904 119 683
96 MX015h05_r BP086748 125 539
97 MX066a05_r BP088660 125 477
98 HC068d10_r AV637082 127 550
99 MX260g07_r BP092913 127 627
100 LC096d07_r AV625682 127 587
101 HC040g07_r AV635010 145 706
102 MX026g12_r BP087153 167 642
103 MX018b09_r BP086840 207 659
104 HC077h07_r AV637816 257 770
105 HC018h09_r AV633282 320 790
106 MX203b01_r BP089220 454 918
107 MX059h07_r BP088416 503 854
108 LC080c03_r AV624615 695 1122
109 HCL063e05_r AV643087 699 1164
110 MX256f05_r BP092612 826 1294
111 MX024f07_r BP087079 842 1258
112 HC086h04_r AV638476 926 1259




Chlamydomonas reinhardtii
Kazusa DNA Research Institute