Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001206A_C01 KCC001206A_c01
(584 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA39492.1| GLP_26_54603_52153 [Giardia lamblia ATCC 50803] 49 7e-05
ref|ZP_00092392.1| COG0642: Signal transduction histidine kinase... 49 7e-05
ref|NP_823727.1| putative translation initiation factor IF-2 [St... 46 4e-04
ref|ZP_00006681.1| COG0665: Glycine/D-amino acid oxidases (deami... 45 0.001
prf||1709354B voltage dependent Ca channel BI-2 44 0.002
>gb|EAA39492.1| GLP_26_54603_52153 [Giardia lamblia ATCC 50803]
Length = 816
Score = 48.5 bits (114), Expect = 7e-05
Identities = 63/197 (31%), Positives = 71/197 (35%), Gaps = 26/197 (13%)
Frame = -2
Query: 514 RPHSRRSTAPARPSPQPRIAP---GIWARTGTAVATAPAAASASAPHS*LVGSFG*KR-R 347
RP R + A RP P PR G+ AR G A AA + G G +R R
Sbjct: 222 RPRGRGACARRRPLPVPRARGPPRGVRARLGRDAARRGVAARGPPARAAAPGRAGDRRGR 281
Query: 346 LGRRNR-------------------QQEPPRSAARRVRAPRRRATGWQRRAAARSRGRGL 224
G R R ++ PPR ARR PR R +RRA RS RG
Sbjct: 282 PGPRPRVRAPLRPRHADGRLSPPPGRRGPPRGDARRGPPPRPRRPRPRRRAPLRSARRGA 341
Query: 223 RRW*FECARSTGSSHCRAPPAA*CPRPGRGAAGLAGRMRTMRAARLRGHSGL-AAPPPA- 50
AR CR PP GRG A RG + L APPPA
Sbjct: 342 -----PDARRRRRRVCRGPPR------GRGGAP-------------RGPARLPRAPPPAA 377
Query: 49 -PAAPRPAPG*TRTRTP 2
P P P R R P
Sbjct: 378 RPGPPPPGRALVRARAP 394
Score = 44.7 bits (104), Expect = 0.001
Identities = 58/176 (32%), Positives = 68/176 (37%), Gaps = 32/176 (18%)
Frame = +3
Query: 21 QPGAGRGAAGA--------GGGAASPE*PRSLAALIVLILPA--RPAAPRPGRGHYAAGG 170
+PG RGA A G G P P +L + LPA R A P GRG AA G
Sbjct: 19 RPGRPRGAQRAPRPAPDPPGPGRRPPRAPGALGGM----LPAAGRLAGPARGRGLRAASG 74
Query: 171 ARQWLLPVLRAHSNH--------------QRRRPRPRLLAAARRCQPVARRRGARTRRAA 308
A + + PVLR + R RPR A R RRR RRA
Sbjct: 75 ALRGVRPVLRPRGRPVARPGRVGRGGGLGRLRDGRPRQRAPGRALGAPGRRRPPAGRRAP 134
Query: 309 ERGG-SCWRLRRPNR----RFQPKLPTN*LCGAEALAAAGAVATA---VPVLAQIP 452
RG R R P R R P+ P +C A GA A VPV ++P
Sbjct: 135 VRGDRRRGRPRAPRRGPGGRLGPRAP---VCRRPRRAGRGAPGRAPGRVPVRRRVP 187
Score = 40.0 bits (92), Expect = 0.024
Identities = 52/173 (30%), Positives = 60/173 (34%), Gaps = 10/173 (5%)
Frame = -2
Query: 511 PHSRRSTAPARPSPQPRIAPGIWARTGTAVATAPAAASASAPHS*LVGSFG*KRRLGRRN 332
P + R PAR G+ A +G P P + G G LGR
Sbjct: 55 PAAGRLAGPAR-------GRGLRAASGALRGVRPVLRPRGRPVA-RPGRVGRGGGLGRLR 106
Query: 331 RQQEPPRSAARRVRAPRRRATGWQRRAAARS-RGRGLRRW*FECARSTGSSHCRAPPAA* 155
+ R+ R + AP RR RRA R R RG R A G P A
Sbjct: 107 DGRPRQRAPGRALGAPGRRRPPAGRRAPVRGDRRRGRPR-----APRRGPGGRLGPRAPV 161
Query: 154 CPRPGRGAAGLAGRMRTMRAARLRGHSGLAAPP---------PAPAAPRPAPG 23
C RP R G GR R R + A PP P APR APG
Sbjct: 162 CRRPRRAGRGAPGRAPGRVPVRRRVPARPAPPPAARYRVRALPERGAPRGAPG 214
Score = 37.7 bits (86), Expect = 0.12
Identities = 42/110 (38%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Frame = +3
Query: 3 GVRVRVQPG--AGRGAAGAGGGAASPE*PRSLAALIVLILPARPAAPRPGRGHYAAGGAR 176
GV R P A G AG G P PR A L R +P PGR G AR
Sbjct: 259 GVAARGPPARAAAPGRAGDRRGRPGPR-PRVRAPLRPRHADGR-LSPPPGRRGPPRGDAR 316
Query: 177 QWLLPVLRAHSNHQRRRPRPRL---LAAARRCQPVARRRGARTRRAAERG 317
+ P + RRPRPR L +ARR P ARRR R R RG
Sbjct: 317 RGPPP--------RPRRPRPRRRAPLRSARRGAPDARRRRRRVCRGPPRG 358
Score = 37.7 bits (86), Expect = 0.12
Identities = 31/91 (34%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Frame = +2
Query: 29 RGTRSGRRGRRSGKS*VTPKPRGPHRP-HPSGKTCCAPPRTWTLRG--RRSAAVATTGTT 199
R GR G R G+ P+ R P RP H G+ P R RG RR
Sbjct: 268 RAAAPGRAGDRRGRPGPRPRVRAPLRPRHADGRLSPPPGRRGPPRGDARRGPPPRPRRPR 327
Query: 200 SAFKSPAAEAAATAP-RRRPPLPACRPPPRG 289
++P A AP RR CR PPRG
Sbjct: 328 PRRRAPLRSARRGAPDARRRRRRVCRGPPRG 358
Score = 37.4 bits (85), Expect = 0.16
Identities = 56/152 (36%), Positives = 62/152 (39%), Gaps = 12/152 (7%)
Frame = +3
Query: 9 RVRVQPGAGRGAAGAGGGAASPE*PRSLAALIVLILPARPAAPRPGRGHYAAG------- 167
R RV G RG GA G A PR+ ARP P PGR A
Sbjct: 348 RRRVCRGPPRGRGGAPRGPARL--PRAPPPA------ARPGPPPPGRALVRARAPAARLR 399
Query: 168 GARQWLLPVLRAHSNHQRRRPR-PRLLAAARRCQPVARRRGARTRRAAERGGSCWRLRRP 344
GAR+ P A R RPR PR+L A RR +PVA R R R G RR
Sbjct: 400 GARRG--PPRGALRRRPRARPRVPRVLRAPRRDRPVAPR--PRPVRRGPPGAEARPGRRR 455
Query: 345 NRRFQPKLPTN*LC----GAEALAAAGAVATA 428
RR P PT+ L GA AA AT+
Sbjct: 456 GRRGGP--PTSGLAFTQSGAPDPRAARRPATS 485
Score = 35.4 bits (80), Expect = 0.59
Identities = 41/118 (34%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
Frame = +3
Query: 12 VRVQPGAGRGAAGAGGGAASPE*PRSLAALIVLILPARPAAPRPGRGHYAAGGARQWLLP 191
VR +PGA R G A PR PA P P PGR A GA +LP
Sbjct: 11 VRRRPGAPRPGRPRGAQRA----PR----------PA-PDPPGPGRRPPRAPGALGGMLP 55
Query: 192 VLRAHSNHQRRRPRPRLLAAARRCQPVARRRGARTRRAAE--RGGSCWRLR--RPNRR 353
+ R R A R +PV R RG R RGG RLR RP +R
Sbjct: 56 AAGRLAGPARGRGLRAASGALRGVRPVLRPRGRPVARPGRVGRGGGLGRLRDGRPRQR 113
Score = 31.6 bits (70), Expect = 8.5
Identities = 62/184 (33%), Positives = 66/184 (35%), Gaps = 22/184 (11%)
Frame = -2
Query: 514 RPHSRRSTAPARPSPQPRI-APGIWARTGTAVATAPAAASASAPHS*LVGSFG*KRRLGR 338
R +RR P P+PR AP AR G A P G+ RL R
Sbjct: 312 RGDARRGPPPRPRRPRPRRRAPLRSARRGAPDARRRRRRVCRGPPRGRGGAPRGPARLPR 371
Query: 337 R-----NRQQEPPRSAARRVRAPRRRATGWQR---RAAARSRGRGLRRW*FECARSTGSS 182
PP A R RAP R G +R R A R R R AR
Sbjct: 372 APPPAARPGPPPPGRALVRARAPAARLRGARRGPPRGALRRRPR---------ARPRVPR 422
Query: 181 HCRAP----PAA*CPRPGR----GAAGLAGRMRTMRAARLRGHSGLA-----APPPAPAA 41
RAP P A PRP R GA GR R R SGLA AP P AA
Sbjct: 423 VLRAPRRDRPVAPRPRPVRRGPPGAEARPGRRRGRRGG--PPTSGLAFTQSGAPDPR-AA 479
Query: 40 PRPA 29
RPA
Sbjct: 480 RRPA 483
>ref|ZP_00092392.1| COG0642: Signal transduction histidine kinase [Azotobacter
vinelandii]
Length = 719
Score = 48.5 bits (114), Expect = 7e-05
Identities = 55/184 (29%), Positives = 69/184 (36%), Gaps = 26/184 (14%)
Frame = -2
Query: 502 RRSTAPARPSPQPRIAPGIWARTGTAVATAPAAASASAPHS*LVGSFG*KRRLGRRNRQQ 323
RR PARP+ PG+ G PA + + P + + G +R RR R
Sbjct: 43 RRRAGPARPAATLSQRPGL---CGPRPGRRPAPGAPARPRA--LRRAGARRDDARRGRPV 97
Query: 322 EPPRSAA-------RRVRAPRRRATGWQRRAAARSRGRGLRRW*FECARSTGSSHCRAPP 164
P A R PRR A R R R L F+ AR+ G+ PP
Sbjct: 98 PVPAPARAGRDHSHRHAHRPRRSAGPHHRPGDGRRR---LPAQAFQSARAAGAHRSADPP 154
Query: 163 AA*CPRPGRGAAGL-AGRMRTMRAA------------------RLRGHSGLAAPPPAPAA 41
A RP R AG A R+R ++ A R+R G PP A A
Sbjct: 155 PAHARRPHRPVAGRRADRLRPLQPAPRRTPPAPRRRRHPADQRRVRPAPGPGPPPRAAAR 214
Query: 40 PRPA 29
PRPA
Sbjct: 215 PRPA 218
>ref|NP_823727.1| putative translation initiation factor IF-2 [Streptomyces
avermitilis MA-4680] gi|29606199|dbj|BAC70262.1|
putative translation initiation factor IF-2
[Streptomyces avermitilis MA-4680]
Length = 1046
Score = 45.8 bits (107), Expect = 4e-04
Identities = 66/215 (30%), Positives = 81/215 (36%), Gaps = 40/215 (18%)
Frame = -2
Query: 538 ARRPTAYCRPHSRRSTAPARPSPQPR-----IAPGIWARTGTAVATAPAAASASAPHS*L 374
A RP A RP + + RP P+P AP A TA +APAA +A+A
Sbjct: 92 AERPAAAERPAAAPAAPGPRPGPKPAPRPAPAAPAPAAPEFTAPPSAPAAPAAAASGPRP 151
Query: 373 VGSFG*KRRLGRRNRQQEPPRSAARRVRAPRR----RATGWQRRAAARSRGRGLR----- 221
G + G R P + +VR R R R+ AAR G+ R
Sbjct: 152 GARPGAPKPGGA--RPATPGQGQGGQVRGERTDRGDRGDRGDRQGAARPGGQAPRPGARP 209
Query: 220 ------RW*FECARSTGSSHCRAPPAA*CPRPGRGAA-------GLAGRMRTMR------ 98
F STG + +AP PRPG A G G+ R R
Sbjct: 210 AGPRPGNNPFTSGGSTGMARPQAPRPGGAPRPGGAGAPGGPRPQGAGGQDRAPRPQGGPG 269
Query: 97 -AARLRGHSGLAAPPPA----PAAPRP--APG*TR 14
A R +G G A P P P APRP APG R
Sbjct: 270 GAPRPQGGPGGARPTPGGMPRPQAPRPGGAPGGNR 304
Score = 32.0 bits (71), Expect = 6.5
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Frame = +2
Query: 83 PKPRGPHRPHPSGKTCCAP----PRTWTLRGRRSAAVATTGTTSAFKSPAAEAAATAPRR 250
PKP RP + + AP PR R A A F +P + AA A
Sbjct: 87 PKPAAAERPAAAERPAAAPAAPGPRPGPKPAPRPAPAAPAPAAPEFTAPPSAPAAPAAAA 146
Query: 251 RPPLPACRPPPRGPDPPR 304
P P RP P R
Sbjct: 147 SGPRPGARPGAPKPGGAR 164
>ref|ZP_00006681.1| COG0665: Glycine/D-amino acid oxidases (deaminating) [Rhodobacter
sphaeroides]
Length = 778
Score = 44.7 bits (104), Expect = 0.001
Identities = 46/122 (37%), Positives = 53/122 (42%), Gaps = 10/122 (8%)
Frame = +3
Query: 9 RVRVQPGAGRGAAG---AGGGAASPE*PRSLA------ALIVLILPARPAAPRPGRGHYA 161
R+ +PGAGRG G AG G A+ P A A L PARP PR GR H
Sbjct: 9 RLEDRPGAGRGLLGDREAGRGDAAHRAPGGRAGDGGGRAAGRLQRPARP-RPRSGRAHRP 67
Query: 162 AGGARQWLLPVLRAHSNHQRRRPRPRLLAAARRCQPVARRRGARTRRA-AERGGSCWRLR 338
A G R+ LL H+ R P L A RR +P +G R E GG R R
Sbjct: 68 AHGHRRRLL--------HRLDRNGPALPALCRRVEP----QGGHARDGRQESGGGARRCR 115
Query: 339 RP 344
P
Sbjct: 116 EP 117
>prf||1709354B voltage dependent Ca channel BI-2
Length = 2424
Score = 43.5 bits (101), Expect = 0.002
Identities = 56/190 (29%), Positives = 67/190 (34%), Gaps = 15/190 (7%)
Frame = -2
Query: 532 RPTAYCRPHSRRSTAPARPSP-----QPRIAPGIWARTGTAVATAPAAASASAPHS*LVG 368
RP + H P R SP + R P R A A A A A A AP L+
Sbjct: 2217 RPHHHHHHHHHPGRGPGRVSPGVSARRRRRGPVARVRPARAPALAHARARARAPAR-LLP 2275
Query: 367 SFG*KRRLGRRNRQQEPPRSAARRVRAPRRRATGWQRRAAARSRGRGLRRW*FECARSTG 188
+R R RQ+ PR RRA G + A S GRG AR G
Sbjct: 2276 ELRLRRARRPRPRQRRRPRRRRGGGGRALRRAPGPREPLAQDSPGRGPSVCLARAARPAG 2335
Query: 187 SSHCRAPPAA*CPRPGRGAAGLAGRMRTMRAARLRGHSGLAAPPPAPA----------AP 38
R P PR G+ + R R L+ PPP P P
Sbjct: 2336 PQ--RLLPG---PRTGQAPRARLPQKPARSVQRERRGLVLSPPPPPPGELAPRAHPARTP 2390
Query: 37 RPAPG*TRTR 8
RP PG +R+R
Sbjct: 2391 RPGPGDSRSR 2400
