Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001205A_C01 KCC001205A_c01
(881 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_139425.2| similar to two pore potassium channel KT3.2 [Ra... 55 2e-06
ref|NP_733671.1| probable translational initiation factor [Strep... 53 8e-06
ref|NP_506359.1| putative protein family member (5O42) [Caenorha... 51 2e-05
dbj|BAC65530.1| mKIAA0324 protein [Mus musculus] 51 3e-05
ref|XP_128495.3| RIKEN cDNA 5033413A03 [Mus musculus] 51 3e-05
>ref|XP_139425.2| similar to two pore potassium channel KT3.2 [Rattus norvegicus]
[Mus musculus]
Length = 330
Score = 55.1 bits (131), Expect = 2e-06
Identities = 36/108 (33%), Positives = 54/108 (49%), Gaps = 2/108 (1%)
Frame = +1
Query: 7 AAVTTPAAASPPLPPSSSGRLSDPS--GKPPLPSQPPPVSQPAAPAQPALPVQPAASAEM 180
AA PAA + P P+ ++P+ +P P++P ++PAAPA+PA P +PAA AE
Sbjct: 39 AAPAEPAAPTEPAAPAEPAAPAEPAEPAEPAEPAEPAEPAEPAAPAEPAAPAEPAAPAEE 98
Query: 181 RRSSTTGLANGGAARSTGAGMGAGVATKSGYHTPAGEEGGSVGGSSLK 324
+ G A+ G A S +G G +S GE GG ++
Sbjct: 99 AEPAEPG-ASAGPAESAESG-EPGEVVESQEPAAPGETPQPSGGGEVR 144
Score = 43.9 bits (102), Expect = 0.004
Identities = 24/59 (40%), Positives = 34/59 (56%)
Frame = +1
Query: 1 ARAAVTTPAAASPPLPPSSSGRLSDPSGKPPLPSQPPPVSQPAAPAQPALPVQPAASAE 177
+RA V A PP+ S L P +P +P++P ++PAAP +PA P +PAA AE
Sbjct: 5 SRAPVVITTPADPPVYAESVA-LGAPE-EPAVPAEPAAPAEPAAPTEPAAPAEPAAPAE 61
>ref|NP_733671.1| probable translational initiation factor [Streptomyces coelicolor
A3(2)] gi|24413891|emb|CAD55362.1| probable
translational initiation factor [Streptomyces coelicolor
A3(2)]
Length = 1033
Score = 52.8 bits (125), Expect = 8e-06
Identities = 39/110 (35%), Positives = 44/110 (39%), Gaps = 9/110 (8%)
Frame = +1
Query: 10 AVTTPAAASPPLPPSSSGRLSDPSGKP---PLPSQPPPVSQPAAPAQPALPVQPAASAEM 180
A PAA S P P S G P KP P P+ P + PAAPA P+ P PA S
Sbjct: 107 AAQQPAAPSAPAPAPSQGPRPTPGPKPAPRPAPAAPEFTAPPAAPAAPSTPA-PAPSGPK 165
Query: 181 RRSSTTGLANGGAARSTGAGMGAGVATKSGYH------TPAGEEGGSVGG 312
+ G G AR +G G G G PA GG GG
Sbjct: 166 PGGARPGAPKPGGARPSGPGQDRGQQGGQGRPGGQRPGAPAQRPGGRPGG 215
Score = 48.9 bits (115), Expect = 1e-04
Identities = 38/115 (33%), Positives = 47/115 (40%), Gaps = 15/115 (13%)
Frame = +1
Query: 4 RAAVTTPAAA------------SPPLPPSSSGRLSDPSGKP---PLPSQPPPVSQPAAPA 138
RAA P+AA S P P S G P KP P P+ P + PAAPA
Sbjct: 93 RAAAPRPSAAPKAPAAQQPAAPSAPAPAPSQGPRPTPGPKPAPRPAPAAPEFTAPPAAPA 152
Query: 139 QPALPVQPAASAEMRRSSTTGLANGGAARSTGAGMGAGVATKSGYHTPAGEEGGS 303
P+ P PA S + G G AR +G G G + G P G+ G+
Sbjct: 153 APSTPA-PAPSGPKPGGARPGAPKPGGARPSGPGQDRG--QQGGQGRPGGQRPGA 204
Score = 40.8 bits (94), Expect = 0.030
Identities = 43/130 (33%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
Frame = -2
Query: 433 AATSAAAGRVAAAPPPRPLPRPARPSWLL*ARG----STRPSASCH-PRCRPPRRPVCGS 269
+A AA + AA P P P A PS A G + RPSA+ P + P P +
Sbjct: 59 SAGRPAAPKKAAPRPSAPSPAQAGPSQAAPAAGDRAAAPRPSAAPKAPAAQQPAAPSAPA 118
Query: 268 PTSSQHPRPCPRLCCAQRHRSQAPWWTSAASLRTRQAAQAVPAALALPAATPAEAAMAAA 89
P SQ PRP P A R AP +T A PAA A + A A
Sbjct: 119 PAPSQGPRPTPGPKPAPRPAPAAPEFT------------------APPAAPAAPSTPAPA 160
Query: 88 ACRWGPRGAR 59
P GAR
Sbjct: 161 PSGPKPGGAR 170
Score = 37.0 bits (84), Expect = 0.44
Identities = 34/109 (31%), Positives = 42/109 (38%)
Frame = -2
Query: 436 TAATSAAAGRVAAAPPPRPLPRPARPSWLL*ARGSTRPSASCHPRCRPPRRPVCGSPTSS 257
+A + A AG AAP RPS +A P + P P +P S
Sbjct: 74 SAPSPAQAGPSQAAPAAGDRAAAPRPS-----------AAPKAPAAQQPAAPSAPAPAPS 122
Query: 256 QHPRPCPRLCCAQRHRSQAPWWTSAASLRTRQAAQAVPAALALPAATPA 110
Q PRP P A R AP +T A A PAA + PA P+
Sbjct: 123 QGPRPTPGPKPAPRPAPAAPEFT---------APPAAPAAPSTPAPAPS 162
>ref|NP_506359.1| putative protein family member (5O42) [Caenorhabditis elegans]
gi|7498004|pir||T20268 hypothetical protein C56A3.1 -
Caenorhabditis elegans gi|3875269|emb|CAB01137.1| C.
elegans GRL-17 protein (corresponding sequence C56A3.1)
[Caenorhabditis elegans]
Length = 393
Score = 51.2 bits (121), Expect = 2e-05
Identities = 37/128 (28%), Positives = 42/128 (31%)
Frame = -1
Query: 404 CCCAAASAATSSCAALMAAMSSWIDTPFSELPPTLPPSSPAGVW*PDFVATPAPMPAPVL 225
CCC + +SC A P + P PP P P PAP
Sbjct: 34 CCCGCGTPQPASCGCAPAC-------PQAPSCPVCPP--------------PQPCPAP-- 70
Query: 224 RAAPPFASPVVDERRISADAAGCTGSAGCAGAAGCDTGGGCDGSGGLPLGSERRPLEDGG 45
P P V + + GC G G GC GGGC G GG G GG
Sbjct: 71 ---PAAYCPQVQPVYVQSGGGGCGGGGCGGGGGGCGGGGGCGGGGGGGCG--------GG 119
Query: 44 SGGDAAAG 21
GG G
Sbjct: 120 GGGGCGGG 127
Score = 34.3 bits (77), Expect = 2.8
Identities = 30/98 (30%), Positives = 32/98 (32%), Gaps = 3/98 (3%)
Frame = +1
Query: 49 PSSSGRLSDPSGKPPLPSQPPPVSQPAAPAQPALPVQPA---ASAEMRRSSTTGLANGGA 219
P+S G P P PPP PA PA VQP + G GG
Sbjct: 43 PASCGCAPACPQAPSCPVCPPPQPCPAPPAAYCPQVQPVYVQSGGGGCGGGGCGGGGGGC 102
Query: 220 ARSTGAGMGAGVATKSGYHTPAGEEGGSVGGSSLKGVS 333
G G G G G G GG GG G S
Sbjct: 103 GGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGGS 140
>dbj|BAC65530.1| mKIAA0324 protein [Mus musculus]
Length = 1754
Score = 50.8 bits (120), Expect = 3e-05
Identities = 55/144 (38%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Frame = +2
Query: 20 RQRQRRRHSRRLQAGASRTPAASRRCHRSLRRCRSRQRQRSRHCLCSLPRPQRCGARPPR 199
RQ R SRR + G SRTP SR+ RS +R RSR S +R +R P
Sbjct: 834 RQESSRTSSRR-RRGRSRTPLTSRKRSRSRTSPAPWKRSRSR---ASPATHRRSRSRTP- 888
Query: 200 GLRTVALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR*RACRSTSS*QP*GPRRTR* 379
++ R +++R RRSR+ R +R A+ V+ R RS S P RR+R
Sbjct: 889 ---LISRRRSRSRTSPVSRRRSRSVNRRRSRSRASPVSRR----RSRSRTPPVTRRRSRS 941
Query: 380 R-PRRRRS-SNTACRGRRRCRLRT 445
R P RRRS S T RRR R RT
Sbjct: 942 RTPTRRRSRSRTPPVTRRRSRSRT 965
Score = 45.4 bits (106), Expect = 0.001
Identities = 50/141 (35%), Positives = 61/141 (42%), Gaps = 15/141 (10%)
Frame = +2
Query: 68 SRTPAASRRCHRSL------RRCRSRQRQRSRHCLCSLPRPQRCGARPP-----RGLRTV 214
SRTP SRR RS RR RS R+RSR + R + PP RT
Sbjct: 885 SRTPLISRRRSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTP 944
Query: 215 ALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR*RACRSTSS*QP*GPRRTR*R---- 382
R +++R RRSR+ T RR + + RS S P RR+R R
Sbjct: 945 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPV 1004
Query: 383 PRRRRSSNTACRGRRRCRLRT 445
RRR S T+ RRR R RT
Sbjct: 1005 TRRRSRSRTSPVTRRRSRSRT 1025
Score = 42.4 bits (98), Expect = 0.010
Identities = 50/150 (33%), Positives = 65/150 (43%), Gaps = 7/150 (4%)
Frame = +2
Query: 17 RRQRQ-RRRHSRRLQAGASRTPAASRRCHRSLRRCRSRQ--RQRSRHCLCSLPRPQRCGA 187
RR R RR SR + SR + SR + RR RSR R+RSR + R +
Sbjct: 905 RRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRTPPVTRRRSRSR 964
Query: 188 RPPRGLRTVALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR*RACRSTSS*QP*GPR 367
PP V R +++R RRSR+ T RR + + RS S P R
Sbjct: 965 TPP-----VTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRR 1019
Query: 368 RTR*RP----RRRRSSNTACRGRRRCRLRT 445
R+R R RRR S T R+R R R+
Sbjct: 1020 RSRSRTPPAIRRRSRSRTPLLPRKRSRSRS 1049
Score = 42.0 bits (97), Expect = 0.014
Identities = 54/157 (34%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Frame = +2
Query: 11 R*RRQRQRRRHSRRLQAGA---SRTPAASRRCHRSLRRCRSRQRQRSRHCLCSLPRPQ-R 178
R +R R R R +RR + G+ SR+P S RR +R RSR L S R + R
Sbjct: 807 RRQRSRSRSRVTRRRRGGSGYHSRSPTRQESSRTSSRR----RRGRSRTPLTSRKRSRSR 862
Query: 179 CGARPPRGLRTVALRAAQARAWARV----LRRSRATTHRPARRAAAWVAAR*RACRSTSS 346
P + R+ A A R+ +R RRSR+ T +RR + V R RS S
Sbjct: 863 TSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSVNRR----RSRSR 918
Query: 347 *QP*GPRRTR*RPRRRRSSNTACRGRRRCRLRTLTAR 457
P RR+R S T RRR R RT T R
Sbjct: 919 ASPVSRRRSR--------SRTPPVTRRRSRSRTPTRR 947
Score = 40.4 bits (93), Expect = 0.039
Identities = 50/147 (34%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Frame = +2
Query: 17 RRQRQRRRHSRRLQAGASRTPAASRRCHRSLRRCRSRQRQRSRHCLCSLPRPQRCGARPP 196
RR R R RR + SRTP +RR RS +R+R RSR + P +R R
Sbjct: 937 RRSRSRTPTRRRSR---SRTPPVTRRRSRSRTPPVTRRRSRSR----TSPVTRR---RSR 986
Query: 197 RGLRTVALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR*RACRSTSS*QP*GPRRTR 376
V R +++R RRSR+ T RR RS S P RR+R
Sbjct: 987 SRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRR------------RSRSRTPPAIRRRSR 1034
Query: 377 *R----PRRRRSSNTACRGRRRCRLRT 445
R PR+R S + RRR R RT
Sbjct: 1035 SRTPLLPRKRSRSRSPLAIRRRSRSRT 1061
Score = 36.6 bits (83), Expect = 0.57
Identities = 49/171 (28%), Positives = 71/171 (40%), Gaps = 24/171 (14%)
Frame = +2
Query: 5 EPR*RRQRQRRRHSRRLQAGASRTPAASRRCH------RSLRRCRSRQRQRSRHCLCSLP 166
EP + + RRR S + RT SRR R L+R RSR R+ +
Sbjct: 741 EPTEKSRSSRRRRS----VSSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTR---TTR 793
Query: 167 RPQRCGARPPRGLRTVALRAAQARAWARVLRRSRA----TTHRPARRAAAWVAAR*R--- 325
R R G+ ++ + R ++R+ +RV RR R + P R+ ++ ++R R
Sbjct: 794 RRDRSGSS-----QSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPTRQESSRTSSRRRRGR 848
Query: 326 ---------ACRSTSS*QP*GPRRTR*RP--RRRRSSNTACRGRRRCRLRT 445
RS +S P R+R P RR S T RRR R RT
Sbjct: 849 SRTPLTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRT 899
Score = 33.5 bits (75), Expect = 4.8
Identities = 36/106 (33%), Positives = 45/106 (41%), Gaps = 5/106 (4%)
Frame = +2
Query: 17 RRQRQR-----RRHSRRLQAGASRTPAASRRCHRSLRRCRSRQRQRSRHCLCSLPRPQRC 181
RR R R RR SR SRTP A RR RS R+R RSR L R +
Sbjct: 1007 RRSRSRTSPVTRRRSR------SRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSR 1060
Query: 182 GARPPRGLRTVALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR 319
R RG R++ R+ + RRS + + R+A A R
Sbjct: 1061 TPRAARGKRSL------TRSPPAIRRRSASGSSSDRSRSATPPATR 1100
Score = 32.7 bits (73), Expect = 8.2
Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Frame = +1
Query: 16 TTPAAASPPLPPSSSGRLSDPSGKPPLPSQPP--------PVSQPAAPAQPALPVQPAAS 171
++ +++S SSSG S S LP+QP P P + P +P +
Sbjct: 1547 SSSSSSSSSSSSSSSGSSSSDSEGSSLPAQPEVALKRVPSPTPVPKEAIREGRPQEPTPA 1606
Query: 172 AEMRRSSTTGLANGGAARSTGAGMGAGVATKSGYHTPAGEEGGSVGGSS 318
RRSS++ ++ ++ S+ + + ++ S + + S S
Sbjct: 1607 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 1655
>ref|XP_128495.3| RIKEN cDNA 5033413A03 [Mus musculus]
Length = 2607
Score = 50.8 bits (120), Expect = 3e-05
Identities = 55/144 (38%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Frame = +2
Query: 20 RQRQRRRHSRRLQAGASRTPAASRRCHRSLRRCRSRQRQRSRHCLCSLPRPQRCGARPPR 199
RQ R SRR + G SRTP SR+ RS +R RSR S +R +R P
Sbjct: 1687 RQESSRTSSRR-RRGRSRTPLTSRKRSRSRTSPAPWKRSRSR---ASPATHRRSRSRTP- 1741
Query: 200 GLRTVALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR*RACRSTSS*QP*GPRRTR* 379
++ R +++R RRSR+ R +R A+ V+ R RS S P RR+R
Sbjct: 1742 ---LISRRRSRSRTSPVSRRRSRSVNRRRSRSRASPVSRR----RSRSRTPPVTRRRSRS 1794
Query: 380 R-PRRRRS-SNTACRGRRRCRLRT 445
R P RRRS S T RRR R RT
Sbjct: 1795 RTPTRRRSRSRTPPVTRRRSRSRT 1818
Score = 47.4 bits (111), Expect = 3e-04
Identities = 51/149 (34%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Frame = +2
Query: 20 RQRQRRRHSRRLQAGASRTPAASRRCHRSLRRCRSRQRQRSRHCLCSLPRPQRCGARPPR 199
R R R R R SRTPA R R+ R RSR R +R P R +R
Sbjct: 471 RGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSR--- 527
Query: 200 GLRTVALRAAQARAWARVLRRSRATTHRPARRAA---AWVAAR*RACRSTSS*QP*GPRR 370
R+ R +++R+ AR RSR+ T PARR+ + AR RS + + R
Sbjct: 528 -TRSPVRRRSRSRSQARRSGRSRSRT--PARRSGRSRSRTPARRGRSRSRTPARRSARSR 584
Query: 371 TR*RPRRRRSSNTACRGRRRCRLRTLTAR 457
+R P RR S + RRR R R+L R
Sbjct: 585 SR-TPARRGRSRSRTPARRRSRSRSLVRR 612
Score = 45.4 bits (106), Expect = 0.001
Identities = 50/141 (35%), Positives = 61/141 (42%), Gaps = 15/141 (10%)
Frame = +2
Query: 68 SRTPAASRRCHRSL------RRCRSRQRQRSRHCLCSLPRPQRCGARPP-----RGLRTV 214
SRTP SRR RS RR RS R+RSR + R + PP RT
Sbjct: 1738 SRTPLISRRRSRSRTSPVSRRRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTP 1797
Query: 215 ALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR*RACRSTSS*QP*GPRRTR*R---- 382
R +++R RRSR+ T RR + + RS S P RR+R R
Sbjct: 1798 TRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPV 1857
Query: 383 PRRRRSSNTACRGRRRCRLRT 445
RRR S T+ RRR R RT
Sbjct: 1858 TRRRSRSRTSPVTRRRSRSRT 1878
Score = 42.7 bits (99), Expect = 0.008
Identities = 48/142 (33%), Positives = 62/142 (42%), Gaps = 3/142 (2%)
Frame = +2
Query: 20 RQRQRRRHSRRLQAGASRTPAASRRCHRSLRRCRSRQRQRSRHCLCSLPRPQRCGARPPR 199
R QRR SR + G S + + + R R R R RSR P R +R
Sbjct: 447 RNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSR-------TPARRRSRS-- 497
Query: 200 GLRTVALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR*RACRSTSS*QP*GPRRTR- 376
RT A R +++R A RR R+ + PARR + + R RS S + G R+R
Sbjct: 498 --RTPARRRSRSRTPA---RRGRSRSRTPARRRSRTRSPVRRRSRSRSQARRSGRSRSRT 552
Query: 377 --*RPRRRRSSNTACRGRRRCR 436
R R RS A RGR R R
Sbjct: 553 PARRSGRSRSRTPARRGRSRSR 574
Score = 42.4 bits (98), Expect = 0.010
Identities = 50/150 (33%), Positives = 65/150 (43%), Gaps = 7/150 (4%)
Frame = +2
Query: 17 RRQRQ-RRRHSRRLQAGASRTPAASRRCHRSLRRCRSRQ--RQRSRHCLCSLPRPQRCGA 187
RR R RR SR + SR + SR + RR RSR R+RSR + R +
Sbjct: 1758 RRSRSVNRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTRRRSRSRTPPVTRRRSRSR 1817
Query: 188 RPPRGLRTVALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR*RACRSTSS*QP*GPR 367
PP V R +++R RRSR+ T RR + + RS S P R
Sbjct: 1818 TPP-----VTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRR 1872
Query: 368 RTR*RP----RRRRSSNTACRGRRRCRLRT 445
R+R R RRR S T R+R R R+
Sbjct: 1873 RSRSRTPPAIRRRSRSRTPLLPRKRSRSRS 1902
Score = 42.0 bits (97), Expect = 0.014
Identities = 54/157 (34%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Frame = +2
Query: 11 R*RRQRQRRRHSRRLQAGA---SRTPAASRRCHRSLRRCRSRQRQRSRHCLCSLPRPQ-R 178
R +R R R R +RR + G+ SR+P S RR +R RSR L S R + R
Sbjct: 1660 RRQRSRSRSRVTRRRRGGSGYHSRSPTRQESSRTSSRR----RRGRSRTPLTSRKRSRSR 1715
Query: 179 CGARPPRGLRTVALRAAQARAWARV----LRRSRATTHRPARRAAAWVAAR*RACRSTSS 346
P + R+ A A R+ +R RRSR+ T +RR + V R RS S
Sbjct: 1716 TSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSVNRR----RSRSR 1771
Query: 347 *QP*GPRRTR*RPRRRRSSNTACRGRRRCRLRTLTAR 457
P RR+R S T RRR R RT T R
Sbjct: 1772 ASPVSRRRSR--------SRTPPVTRRRSRSRTPTRR 1800
Score = 40.8 bits (94), Expect = 0.030
Identities = 47/157 (29%), Positives = 64/157 (39%), Gaps = 6/157 (3%)
Frame = +2
Query: 8 PR*RRQRQRRRHSRRL---QAGASRTPAAS--RRCHRSLRRCRSRQRQRSR-HCLCSLPR 169
P+ RR R +R + + G SR+P R + RR RSR +R R H R
Sbjct: 412 PQWRRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATR 471
Query: 170 PQRCGARPPRGLRTVALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR*RACRSTSS* 349
+ P R R+ + A+ R+ +R R R+ + PARR RS S
Sbjct: 472 GRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRG-----------RSRSRT 520
Query: 350 QP*GPRRTR*RPRRRRSSNTACRGRRRCRLRTLTART 460
RTR RRR S + R R R RT R+
Sbjct: 521 PARRRSRTRSPVRRRSRSRSQARRSGRSRSRTPARRS 557
Score = 40.4 bits (93), Expect = 0.039
Identities = 50/147 (34%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Frame = +2
Query: 17 RRQRQRRRHSRRLQAGASRTPAASRRCHRSLRRCRSRQRQRSRHCLCSLPRPQRCGARPP 196
RR R R RR + SRTP +RR RS +R+R RSR + P +R R
Sbjct: 1790 RRSRSRTPTRRRSR---SRTPPVTRRRSRSRTPPVTRRRSRSR----TSPVTRR---RSR 1839
Query: 197 RGLRTVALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR*RACRSTSS*QP*GPRRTR 376
V R +++R RRSR+ T RR RS S P RR+R
Sbjct: 1840 SRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRR------------RSRSRTPPAIRRRSR 1887
Query: 377 *R----PRRRRSSNTACRGRRRCRLRT 445
R PR+R S + RRR R RT
Sbjct: 1888 SRTPLLPRKRSRSRSPLAIRRRSRSRT 1914
Score = 36.6 bits (83), Expect = 0.57
Identities = 49/171 (28%), Positives = 71/171 (40%), Gaps = 24/171 (14%)
Frame = +2
Query: 5 EPR*RRQRQRRRHSRRLQAGASRTPAASRRCH------RSLRRCRSRQRQRSRHCLCSLP 166
EP + + RRR S + RT SRR R L+R RSR R+ +
Sbjct: 1594 EPTEKSRSSRRRRS----VSSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTR---TTR 1646
Query: 167 RPQRCGARPPRGLRTVALRAAQARAWARVLRRSRA----TTHRPARRAAAWVAAR*R--- 325
R R G+ ++ + R ++R+ +RV RR R + P R+ ++ ++R R
Sbjct: 1647 RRDRSGSS-----QSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPTRQESSRTSSRRRRGR 1701
Query: 326 ---------ACRSTSS*QP*GPRRTR*RP--RRRRSSNTACRGRRRCRLRT 445
RS +S P R+R P RR S T RRR R RT
Sbjct: 1702 SRTPLTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRT 1752
Score = 33.5 bits (75), Expect = 4.8
Identities = 36/106 (33%), Positives = 45/106 (41%), Gaps = 5/106 (4%)
Frame = +2
Query: 17 RRQRQR-----RRHSRRLQAGASRTPAASRRCHRSLRRCRSRQRQRSRHCLCSLPRPQRC 181
RR R R RR SR SRTP A RR RS R+R RSR L R +
Sbjct: 1860 RRSRSRTSPVTRRRSR------SRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSR 1913
Query: 182 GARPPRGLRTVALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR 319
R RG R++ R+ + RRS + + R+A A R
Sbjct: 1914 TPRAARGKRSL------TRSPPAIRRRSASGSSSDRSRSATPPATR 1953
Score = 32.7 bits (73), Expect = 8.2
Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Frame = +1
Query: 16 TTPAAASPPLPPSSSGRLSDPSGKPPLPSQPP--------PVSQPAAPAQPALPVQPAAS 171
++ +++S SSSG S S LP+QP P P + P +P +
Sbjct: 2400 SSSSSSSSSSSSSSSGSSSSDSEGSSLPAQPEVALKRVPSPTPVPKEAIREGRPQEPTPA 2459
Query: 172 AEMRRSSTTGLANGGAARSTGAGMGAGVATKSGYHTPAGEEGGSVGGSS 318
RRSS++ ++ ++ S+ + + ++ S + + S S
Sbjct: 2460 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2508
Score = 32.7 bits (73), Expect = 8.2
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Frame = +2
Query: 17 RRQRQRRRH-SRRLQAGASRTPAASRRCH-RSLRRCRSRQRQRSRHCLCSLPRPQRCGAR 190
RR R R R +RR SRTPA R R+ R RSR R R PQR G
Sbjct: 567 RRGRSRSRTPARRSARSRSRTPARRGRSRSRTPARRRSRSRSLVRRGRSHSRTPQRRGRS 626
Query: 191 PPRGLRTVALRAAQARAWARVLRRSRATTHRPARRAAAWVAAR*RA---CRSTSS*QP*G 361
R R +Q R+ + + +H +RR+ + + R +A RS S P
Sbjct: 627 GSSSERKNKSRTSQRRSRSNSSPEMK-KSHVSSRRSRSLSSPRSKAKSLRRSLSGSSPCP 685
Query: 362 PRRTR*RPRRRRSSNT 409
++++ RR RS ++
Sbjct: 686 KQKSQTPTRRSRSGSS 701
