KCC001200A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC001200A_C01 KCC001200A_c01
cacaGGTTCCTGTACACCCTCATACATACACATACACCACTTTAGACGCGCAGTGCAAGC
ACAATGCAGGTCATGCAGACTCGCACCGTTTCGGGCGCTCGCCCTATTGGCGCCAGCAGC
AGCCGTGTGACCCTGGCTGCCTGTGAAGCAGGTGAAGGTGTCGTCCACCACCACCAGCGC
TTCTCCCCAGGAGGAGATCTACATCGGCTTCGTCAAGGAGGAGGGCTTCGGCTCGCGCGA
GGGCCGCAAGGGCCGCGTCATCAAGGACGACCCCAAGAAGTACCCCAGCCGCGACTGGGT
TGGCGTGGGTGGCTGGGCTGGTGGCGAGGCCGGCCTGTGGCAGCTGCGTGAGCAGGTCAT
TAAGGAGAAGGACTCCAAGAAGCCCGCCGTCCCCGACCCCTCGTCGCCCCTGCCGGTGAA
GGTCCCCAAGGCCCCCGCGGGCAAGGCGCCGGTCTACATTGGCTTCGTCAAGGAGGAGGG
CTTCGGCAACCGCGACGGCAAGCGCGGCCGCATCGTTGTTGACGACCCCCGCAAGTACGG
CGGCAAGGAGGACCTGGGCCCCCTGCCCGGCGTCACCGGTGGCTTCGCTGCCGGCGAGGT
GGGCCTGAAGCAGTACGTGGCCACTGGCGATGTGAAGCTGCGCCAGCCCGGCCAGCCGGG
TCCCCGGCAGTTCTCGCCGCTGACCCTGGCGGGCGTGGTGGCCCTGGCCGGCGCGCTCGG
TGGCGTGCTGCTGGGCCTGGTGAACGACGCGGCGGGCGGCAACTGATGAGAACACGCTCA
AGTACGTTGCAGTCGGTGCGGCGGTGGTGGGCGGCTCGGCGGTGCTGATCGCGGTGAACA
ACGCGGTGCGCTCGCTGCAGCGGCAGGTCGAGGAGAACGGGGGTCGCGTGGTCGTGTCGG
CGGCGTTCCTGGCCGTGGTGATTCTGCTCGCCAAGAGCATCATCGAGAGCCAGTAAGGAG
CGCGAGGAGGCGCGGGATTAACGCGCCGGCTGCCGTGTGCTGCTTGCCTGGAGGGTAATT
CTGGGGAGCAGCGCGCCGCCGTTTTGGCACAGCAGGATGGCAATGAGAGAGGACTCACGA
CGTTGGGCGAAAGGGAGTTTCGGCACCCTTGACACCTGCGGAGATGCTGAACCGCTGGAC
CACGCAATTCTTTACCTTCCCCTTCGGCATGCTGCTATACGTTTGCTGCTGCCGCTGCAG
ATTGCAGCCGATGGTGTGTGTTTGTGTATTAGGGGTTTTCTGGGGGCCGGGCGCGGTACA
ATTGGGCGCGCCGCCGTCCGCCGTGCACTGCCGTTGTGAGCTGCTGCAAAGCGTTTTGTG
TGTGTGTGTGATGTGATGTGATTGCATCATGGGCTGATGGCTCATTGCAGCTAATTTTCT
GAGACTGTTGCTTTGGGACACCTGCCGGGTGTTGTCTGATTTTCCCGCGGAGCTCTGGCC
CCGCTGTTGCGGGTTGGCAACCGCTCAATAAACCTTACTGCCTCCCGCATCCGCTTTGGT
TCGCGGCGCGCTTCCGGACGTTTGTGGACGGGAGGGCTGCCCCGAGCCCTTGGCACAAGC
CCTGAGGCGCAGGCGGCGGCTCCTCGC
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001200A_C01 KCC001200A_c01
(1587 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 74 1e-11
ref|NP_730262.2| CG13731-PA [Drosophila melanogaster] gi|2838049... 70 1e-10
gb|AAB70928.1| proline rich protein [Santalum album] 67 1e-09
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote... 67 1e-09
gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major] 66 2e-09
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 73.6 bits (179), Expect = 1e-11
Identities = 100/357 (28%), Positives = 120/357 (33%), Gaps = 6/357 (1%)
Frame = -1
Query: 1257 TAPGPQKTPNTQTHTIGCN--LQRQQQTYSSMPKGKVKNCVVQRFSISAGVKGAETPFRP 1084
TA + NT +H G + + Q Q + P GK K G GA P P
Sbjct: 12 TALTAMQLANTASHAQGASPLVVAQAQPQETGPDGKPKQP-------PKGPPGAAPPAAP 64
Query: 1083 TS*VLSHCHPAVPKRRRAAPQNYPPGKQHTAAGALIPRLLALLTGSR*CSWRAESPRPGT 904
PA P A P +PP AA P A P P
Sbjct: 65 A-------RPAAPPPAAAPP--HPPAAPPPAAAPPRPA--------------APPPPPPP 101
Query: 903 PPTRPRDPRSPRPAAAASAPRCSPRSAPPSR---PPPPHRLQRT*ACSHQLPPAASFTRP 733
P RP P P P AA P P +AP PPPP A + PP A+ +
Sbjct: 102 PAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQH 161
Query: 732 SSTPPSAPARATTPARVSGENCRGPGWPGWRSFTSPVATYCFRPTSPAAKPPVTPGRGPR 553
+ PP PA TP P P R +P AT PT P A PP P P
Sbjct: 162 APPPPPPPAARPTPTPPPPP----PAGPAARPTPAPTAT----PT-PVAPPPAAPTARPG 212
Query: 552 SSLPPYLRGSSTTMRPRLPSRLPKPSSLTKPM*T-GALPAGALGTFTGRGDEGSGTAGFL 376
S P + T P+ P P++ P T GA PAG G GS A
Sbjct: 213 SPAPAATPAPTPT---PAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAA-- 267
Query: 375 ESFSLMTCSRSCHRPASPPAQPPTPTQSRLGYFLGSSLMTRPLRPSREPKPSSLTKP 205
SPPA TP + G++ PS P P+S P
Sbjct: 268 ---------------GSPPAPGATPAPTTTPAPGGTA-----TPPSGRPGPASTPAP 304
Score = 42.7 bits (99), Expect = 0.018
Identities = 61/229 (26%), Positives = 75/229 (32%), Gaps = 8/229 (3%)
Frame = -2
Query: 752 PRRSPGPAARHRAR---RPGPPRP---PGSAARTAGDPA-GRAGAASHRQWPRTASGPPR 594
P +P P + A RPG P P PGS PA G A + P + PP
Sbjct: 234 PTATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTATPP- 292
Query: 593 RQRSHR*RRAGGPGPPCRRTCGGRQQR-CGRACRRGCRSPPP*RSQCRPAPCPRGPWGPS 417
+G PGP G G +PPP R P P P+G G
Sbjct: 293 ---------SGRPGPASTPAPGAATPAPTATPAPGGALTPPPGRPGAGPTPGPQG--GTP 341
Query: 416 PAGATRGRGRRASWSPSP**PAHAAATGRPRHQPSHPRQPSRGWGTSWGRP**RGPCGPR 237
PAGA A G P P P+R P G
Sbjct: 342 PAGAP--------------------AAGTPAAPPQAGGLPARP----------AAPAGAA 371
Query: 236 ASRSPPP*RSRCRSPPGEKRWWWWTTPSPASQAARVTRLLLAPIGRAPE 90
A + P S +PP + + T +PA QAA L P R P+
Sbjct: 372 APSTVPG--SAAATPPPNRAQFAPPTVTPAFQAAPTVVAPLPPPPRPPQ 418
Score = 39.3 bits (90), Expect = 0.20
Identities = 77/286 (26%), Positives = 95/286 (32%), Gaps = 43/286 (15%)
Frame = +3
Query: 165 PPPPALLPRRRSTSASSRRR-------ASARARAARAASSRT-TPRSTPAATGLAWVAGL 320
PPPP P R T A + A+ AR A + T P TPA T
Sbjct: 178 PPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAPTPTPAPTA---TPAP 234
Query: 321 VARPACGSCVSRSLRRRTPRSPPSPTPRRPCR*RSPRPP--------------------- 437
A PA GS R PP P P SP P
Sbjct: 235 TATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTATPPSG 294
Query: 438 RARRRSTLASSRRRASATATASAAASLLTTPASTAARRTWAPCPASPVASLPARWA*SS- 614
R ST A + TAT + +L P A T P +P A PA ++
Sbjct: 295 RPGPASTPAPGAATPAPTATPAPGGALTPPPGRPGAGPTPGPQGGTPPAGAPAAGTPAAP 354
Query: 615 -------TWPLAM*SCASPASRVPGSSRR--*PWRAWWP----WPARSVACCWAW*TTRR 755
P A A+P S VPGS+ P RA + PA A
Sbjct: 355 PQAGGLPARPAAPAGAAAP-STVPGSAAATPPPNRAQFAPPTVTPAFQAAPTVVAPLPPP 413
Query: 756 AATDENTLKYVAVGAAVVGGSAVLIAVNNAVRSLQRQVEENGGRVV 893
+ L +A+GA VV G+ +I A QR+ GGR V
Sbjct: 414 PRPPQRDLTPLAIGAGVVAGA--VIGATIADLHNQRRESIEGGRTV 457
Score = 37.4 bits (85), Expect = 0.76
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Frame = -1
Query: 927 AESPRPGTPPTRPRD---PRSPRPAAAASAPRCSPRSAPPSRPPPPHRLQ-RT*ACSHQL 760
A +P GTP P+ P P A A+AP P SA + PPP+R Q +
Sbjct: 343 AGAPAAGTPAAPPQAGGLPARPAAPAGAAAPSTVPGSA--AATPPPNRAQFAPPTVTPAF 400
Query: 759 PPAASFTRPSSTPPSAPARATTPARV 682
A + P PP P R TP +
Sbjct: 401 QAAPTVVAPLPPPPRPPQRDLTPLAI 426
>ref|NP_730262.2| CG13731-PA [Drosophila melanogaster] gi|28380492|gb|AAF49349.4|
CG13731-PA [Drosophila melanogaster]
Length = 926
Score = 69.7 bits (169), Expect = 1e-10
Identities = 93/321 (28%), Positives = 121/321 (36%), Gaps = 37/321 (11%)
Frame = -1
Query: 1056 PAVPKRRRAAPQNYPPG---KQHTAAGALIPRLLALLTGSR*CSWRAESPRPGTPPTRP- 889
P V RR P PP + T A +P L + +PRP PPT+P
Sbjct: 350 PPVTTRRPTPPPTRPPPPPTRASTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTPPPTKPP 409
Query: 888 -RDPRS--PRPAAAASAPRCSPRSAPPSRPP----PPHRLQRT*ACSHQLPPAASFTRPS 730
R P + P P + P P + PP++PP PP ++ T A PP TRP
Sbjct: 410 TRPPTTYLPPPTVRTTRPP-PPPTRPPTKPPTTYLPPVTVRTTRATP---PPTRPPTRPP 465
Query: 729 STPPSAPARATTPA----------------RVSGENCRGPGWPGWRSFTSPVATYCFRPT 598
+ PP+ R TTPA R + P P + T P TY PT
Sbjct: 466 TYPPTT-RRLTTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTKPPTRPPTTYLPPPT 524
Query: 597 SPAAKPPVTPGRGPR----SSLPPY-LRGSSTTMRPRLPSRLPKPSSLTKPM*TGALPAG 433
+PP P R P + LPP +R + T P P P T+P P
Sbjct: 525 VRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTPPPTRP------PPP 578
Query: 432 ALGTFTGRGDEGSGTAGFLESFSLMTCSRSCHRPASPPAQPPT--PTQSRLGYFLGSSLM 259
T T L ++ T R+ RP PP +PPT PT Y S+
Sbjct: 579 PTRASTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTKPPTRPPTT----YLPPPSVR 634
Query: 258 TR--PLRPSREP-KPSSLTKP 205
T P P+R P KP + P
Sbjct: 635 TTRPPPPPTRPPTKPPTTYLP 655
Score = 68.6 bits (166), Expect = 3e-10
Identities = 90/320 (28%), Positives = 120/320 (37%), Gaps = 36/320 (11%)
Frame = -1
Query: 1056 PAVPKRRRAAPQNYPPGKQHTAAGALIPRLLALLTGSR*CSWRAESPRPGTPPTRP--RD 883
P P R P PP + T A +P L + +PRP PPT+P R
Sbjct: 567 PPTPPPTRPPP---PPTRASTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTKPPTRP 623
Query: 882 PRS--PRPAAAASAPRCSPRSAPPSRPP----PPHRLQRT*ACSHQLPPAASFTRPSSTP 721
P + P P+ + P P + PP++PP PP ++ T A PP TRP + P
Sbjct: 624 PTTYLPPPSVRTTRPP-PPPTRPPTKPPTTYLPPVTVRTTRATP---PPTRPPTRPPTYP 679
Query: 720 PSAPARATTPA----------------RVSGENCRGPGWPGWRSFTSPVATYCFRPTSPA 589
P+ R TTPA R + P P + T P TY PT
Sbjct: 680 PTT-RRLTTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTKPPTRPPTTYLPPPTVRT 738
Query: 588 AKPPVTPGRGPR----SSLPPY----LRGSSTTMRP--RLPSRLPKPSSLTKPM*TGALP 439
+PP P R P + LPP R + RP R P+ P LT P T P
Sbjct: 739 TRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTYPPTTRRLTTPAPTYLPP 798
Query: 438 AGALGTFTGRGDEGSGTAGFLESFSLMTCSRSCHRPASPPAQPPTPTQSRLGYFLGSSLM 259
T L ++ T R+ RP PP +PPT + + L
Sbjct: 799 ----------------TNKPLPPVTVRTTVRTTPRPTLPPTRPPTKPPT-------TYLP 835
Query: 258 TRPLRPSREPKPSSL--TKP 205
+R +R P P + TKP
Sbjct: 836 PPTVRTTRPPPPPTRPPTKP 855
Score = 65.1 bits (157), Expect = 3e-09
Identities = 82/288 (28%), Positives = 102/288 (34%), Gaps = 49/288 (17%)
Frame = -1
Query: 921 SPRPGTPPTRPRDPRSP--------RPAAAASA----PRCSPRSAPPSRP---PPPHRLQ 787
+P P PPTRP R P +P + P PR+ PP+RP PP R
Sbjct: 279 TPPPTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTKPPTTRPP 338
Query: 786 RT*ACSHQLPPAASFTR----PSSTPPSAPARATTPA----------------RVSGENC 667
T PP TR P + PP P RA+TPA R +
Sbjct: 339 ATYLPPTNKPPPPVTTRRPTPPPTRPPPPPTRASTPAPTYLPPTNKPLPPVTVRTTVRTT 398
Query: 666 RGPGWPGWRSFTSPVATYCFRPTSPAAKPPVTPGRGPRSSLPPYL--------RGSSTTM 511
P P + T P TY PT +PP P R P YL R +
Sbjct: 399 PRPTPPPTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPT 458
Query: 510 RP--RLPSRLPKPSSLTKPM*TGALPAGALGTFTGRGDEGSGTAGFLESFSLMTCSRSCH 337
RP R P+ P LT P T P T L ++ T R+
Sbjct: 459 RPPTRPPTYPPTTRRLTTPAPTYLPP----------------TNKPLPPVTVRTTVRTTP 502
Query: 336 RPASPPAQPPT--PTQSRLGYFLGSSLMTRPLRPSREPKPSSL--TKP 205
RP PP +PPT PT + L +R +R P P + TKP
Sbjct: 503 RPTLPPTKPPTRPPT---------TYLPPPTVRTTRPPPPPTRPPTKP 541
Score = 60.1 bits (144), Expect = 1e-07
Identities = 66/216 (30%), Positives = 85/216 (38%), Gaps = 30/216 (13%)
Frame = -1
Query: 1047 PKRRRAAPQNYPPGKQH--TAAGALIPRLLALLTGSR*CSWRAESPRPGTPPTRP--RDP 880
P R P YPP + T A +P L + +PRP PPT+P R P
Sbjct: 668 PTRPPTRPPTYPPTTRRLTTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTKPPTRPP 727
Query: 879 RS--PRPAAAASAPRCSPRSAPPSRPP----PPHRLQRT*ACSHQLPPAASFTRPSSTPP 718
+ P P + P P + PP++PP PP ++ T A PP TRP + PP
Sbjct: 728 TTYLPPPTVRTTRPP-PPPTRPPTKPPTTYLPPVTVRTTRATP---PPTRPPTRPPTYPP 783
Query: 717 SAPARATTPA----------------RVSGENCRGPGWPGWRSFTSPVATYCFRPTSPAA 586
+ R TTPA R + P P R T P TY PT
Sbjct: 784 TT-RRLTTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLPPTRPPTKPPTTYLPPPTVRTT 842
Query: 585 KPPVTPGRGPR----SSLPPYLRGSSTTMRPRLPSR 490
+PP P R P + LPP + TT P P+R
Sbjct: 843 RPPPPPTRPPTKPPTTYLPP-VTVVRTTRPPPPPTR 877
Score = 56.6 bits (135), Expect = 1e-06
Identities = 74/259 (28%), Positives = 93/259 (35%), Gaps = 20/259 (7%)
Frame = -1
Query: 921 SPRPGTPPTRPRDPRSP--------RPAAAASA----PRCSPRSAPPSRPPPPHRLQRT* 778
+P P PPTRP R P +P + P SPR+ PP+RPP R T
Sbjct: 236 TPPPTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPSPRTPPPTRPPT--RPPTTR 293
Query: 777 ACSHQLPPAASFTRPSST--PPSAPARATTPARVSGENCRGPGWPGWRSFTSPVATYCFR 604
+ LPP P +T PP P T P
Sbjct: 294 PPATYLPPTNKPLPPVTTRLPPPPPPPRTPP----------------------------- 324
Query: 603 PTSPAAKPPVTPGRGPRSSLPPYLRGSS--TTMRPRLPSRLPKPSSLTKPM*TGALPAGA 430
PT P KPP T R P + LPP + TT RP P P P P + PA
Sbjct: 325 PTRPPTKPPTT--RPPATYLPPTNKPPPPVTTRRPTPPPTRPPP-----PPTRASTPAPT 377
Query: 429 LGTFTGRGDEGSGTAGFLESFSLMTCSRSCHRPASPPAQPPT--PTQSRLGYFLGSSLMT 256
T + L ++ T R+ RP PP +PPT PT + L
Sbjct: 378 YLPPTNKP---------LPPVTVRTTVRTTPRPTPPPTKPPTRPPT---------TYLPP 419
Query: 255 RPLRPSREPKPSSL--TKP 205
+R +R P P + TKP
Sbjct: 420 PTVRTTRPPPPPTRPPTKP 438
Score = 52.0 bits (123), Expect = 3e-05
Identities = 57/211 (27%), Positives = 74/211 (35%), Gaps = 5/211 (2%)
Frame = -1
Query: 918 PRPGTPPTRPRDPRSPRPAAAASAPRCSPRSAPPSRP--PPPHRLQRT*ACSHQLPPAAS 745
P P P P P P + P P + PP+RP PPP L T + LPP +
Sbjct: 170 PPPDVPFDLPVRTTQP-PTRPPTRPPTRPPTRPPTRPPTPPPTYLPPT---NKPLPPVTT 225
Query: 744 FTRPSSTPPSAPARATTPARVSGENCRGPGWPGWRSFTSPVATYC-FRPTSPAAKPPVTP 568
P PP P P R P PV T P SP PP P
Sbjct: 226 RLPPPPPPPRTPPPTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPSPRTPPPTRP 285
Query: 567 GRGPRSSLPP--YLRGSSTTMRPRLPSRLPKPSSLTKPM*TGALPAGALGTFTGRGDEGS 394
P ++ PP YL ++ + P + +RLP P + P T
Sbjct: 286 PTRPPTTRPPATYLPPTNKPL-PPVTTRLPPPPPPPRTPPPTRPPTKPPTT--------R 336
Query: 393 GTAGFLESFSLMTCSRSCHRPASPPAQPPTP 301
A +L + + RP PP +PP P
Sbjct: 337 PPATYLPPTNKPPPPVTTRRPTPPPTRPPPP 367
>gb|AAB70928.1| proline rich protein [Santalum album]
Length = 326
Score = 66.6 bits (161), Expect = 1e-09
Identities = 68/221 (30%), Positives = 88/221 (39%), Gaps = 11/221 (4%)
Frame = -1
Query: 927 AESPRP-GTPPTRPRDPRSPRPAAAASAPRCSPRSAPPSRPPPPHRLQRT*ACSHQLPPA 751
++ P P GTPPT R P P A+ + +P P + P RP P T + + PP
Sbjct: 119 SDPPTPYGTPPTVRRSPSPPESASPSPSPG-PPAATPTPRPSSPTSTPPTDGETPR-PPG 176
Query: 750 ASFTRPSSTPPSAPARATTPARVSGENCRG-PGWPGWRSFTSPVATYCFRPTSPAAKPPV 574
PS PPS +P+ + R PG P + + SP PT PA+ P
Sbjct: 177 PRSPSPSPGPPSCSPSPKSPSPPASSPPRSRPGPPDYTTSPSPPTPRSVPPTPPASPSPP 236
Query: 573 T-----PGRG----PRSSLPPYLRGSSTTMRPRLPSRLPKPSSLTKPM*TGALPAGALGT 421
T P RG P +S P R S + P PS P P L P+ T PA
Sbjct: 237 TAKPSPPSRGSSPSPPTSPTPTPRPPSYSPSPTPPSSRPSPP-LRSPILTPPSPAAVPPI 295
Query: 420 FTGRGDEGSGTAGFLESFSLMTCSRSCHRPASPPAQPPTPT 298
GR S + S P+SPP PPTP+
Sbjct: 296 --GRSPP-----------SPIDPPCSSPEPSSPPTSPPTPS 323
Score = 57.4 bits (137), Expect = 7e-07
Identities = 58/196 (29%), Positives = 76/196 (38%), Gaps = 2/196 (1%)
Frame = -1
Query: 1053 AVPKRRRAAPQNYPP--GKQHTAAGALIPRLLALLTGSR*CSWRAESPRPGTPPTRPRDP 880
A P R ++P + PP G+ G PR + G CS +SP P P + P
Sbjct: 152 ATPTPRPSSPTSTPPTDGETPRPPG---PRSPSPSPGPPSCSPSPKSPSP--PASSPPRS 206
Query: 879 RSPRPAAAASAPRCSPRSAPPSRPPPPHRLQRT*ACSHQLPPAASFTRPSSTPPSAPARA 700
R P S +PRS PP+ P P PP A + PS +P +
Sbjct: 207 RPGPPDYTTSPSPPTPRSVPPTPPASPS------------PPTAKPSPPSRGSSPSPPTS 254
Query: 699 TTPARVSGENCRGPGWPGWRSFTSPVATYCFRPTSPAAKPPVTPGRGPRSSLPPYLRGSS 520
TP P P R + P+ + P SPAA PP+ GR P S + P
Sbjct: 255 PTPTPRPPSYSPSPTPPSSRP-SPPLRSPILTPPSPAAVPPI--GRSPPSPIDPPCSSPE 311
Query: 519 TTMRPRLPSRLPKPSS 472
+ P P P PSS
Sbjct: 312 PSSPPTSP---PTPSS 324
Score = 50.1 bits (118), Expect = 1e-04
Identities = 75/269 (27%), Positives = 91/269 (32%), Gaps = 31/269 (11%)
Frame = -1
Query: 930 RAESPRPGT--------------PPTRPRDP-----------RSPRPAAAASAPRCSPR- 829
R ESP P + PP+ P P + P P P PR
Sbjct: 28 RGESPAPDSRNKNNVKSSGISLLPPSAPTYPTPLQVISQSRTKIPSPTLGLPFPPLDPRK 87
Query: 828 --SAPPSRPPPPHRLQRT*ACSHQLP---PAASFTRPSSTPPSAPARATTPARVSGENCR 664
S P P P L H P P + P TPP+ + P S
Sbjct: 88 PPSGPFGNPNSPASLIPWRRWDHTPPLFNPPSDPPTPYGTPPTVRRSPSPPESASPSPSP 147
Query: 663 GPGWPGWRSFTSPVATYCFRPTSPAAKPPVTPGRGPRSSLPPYLRGSSTTMRPRLPSRLP 484
GP P AT RP+SP + PP T G PR PP R S + P PS P
Sbjct: 148 GP----------PAATPTPRPSSPTSTPP-TDGETPR---PPGPRSPSPSPGP--PSCSP 191
Query: 483 KPSSLTKPM*TGALPAGALGTFTGRGDEGSGTAGFLESFSLMTCSRSCHRPASPPAQPPT 304
P S + P + G + S S T RS P +PPA P
Sbjct: 192 SPKSPSPPA-------------SSPPRSRPGPPDYTTSPSPPT-PRSV--PPTPPASPSP 235
Query: 303 PTQSRLGYFLGSSLMTRPLRPSREPKPSS 217
PT GSS + P P+ P+P S
Sbjct: 236 PTAKPSPPSRGSS-PSPPTSPTPTPRPPS 263
Score = 43.1 bits (100), Expect = 0.014
Identities = 70/230 (30%), Positives = 81/230 (34%), Gaps = 10/230 (4%)
Frame = -2
Query: 752 PRRSPGPAARHRARRPGPPR--PP--GSAARTAG--DPAGRAGAASHRQWPRT----ASG 603
P SPGP A RP P PP G R G P+ G S P++ AS
Sbjct: 143 PSPSPGPPAATPTPRPSSPTSTPPTDGETPRPPGPRSPSPSPGPPSCSPSPKSPSPPASS 202
Query: 602 PPRRQRSHR*RRAGGPGPPCRRTCGGRQQRCGRACRRGCRSPPP*RSQCRPAPCPRGPWG 423
PPR + PGPP T SPP RS P P P
Sbjct: 203 PPRSR----------PGPPDYTTSP---------------SPPTPRS----VP-PTPPAS 232
Query: 422 PSPAGATRGRGRRASWSPSP**PAHAAATGRPRHQPSHPRQPSRGWGTSWGRP**RGPCG 243
PSP A R S SPSP P T RP PS+ P+
Sbjct: 233 PSPPTAKPSPPSRGS-SPSP--PTSPTPTPRP---PSYSPSPT----------------- 269
Query: 242 PRASRSPPP*RSRCRSPPGEKRWWWWTTPSPASQAARVTRLLLAPIGRAP 93
P +SR PP RS +P PSPA+ + PIGR+P
Sbjct: 270 PPSSRPSPPLRSPILTP-----------PSPAA---------VPPIGRSP 299
Score = 42.0 bits (97), Expect = 0.031
Identities = 45/147 (30%), Positives = 65/147 (43%), Gaps = 9/147 (6%)
Frame = +3
Query: 165 PPPPALLPRRRSTS--ASSRRRASARARAARAASSRTTPRSTPAATGLAWVAGLVARPAC 338
P PP+ P +S S ASS R+ + S TPRS P T A + A+P+
Sbjct: 184 PGPPSCSPSPKSPSPPASSPPRSRPGPPDYTTSPSPPTPRSVPP-TPPASPSPPTAKPSP 242
Query: 339 GSCVSRSLRRRTPRSPPSPTPRRPCR*RSPRPPRAR----RRSTLASSRRRASATATASA 506
S S +P + P+PTPR P SP PP +R RS + + A+ +
Sbjct: 243 PSRGSSP----SPPTSPTPTPRPPSYSPSPTPPSSRPSPPLRSPILTPPSPAAVPPIGRS 298
Query: 507 AASLLTTPAST---AARRTWAPCPASP 578
S + P S+ ++ T P P+SP
Sbjct: 299 PPSPIDPPCSSPEPSSPPTSPPTPSSP 325
Score = 35.0 bits (79), Expect = 3.8
Identities = 29/83 (34%), Positives = 38/83 (44%), Gaps = 3/83 (3%)
Frame = -1
Query: 930 RAESPRPGTPPT-RPRDPR-SPRPAAAASAPRCSPRSAPPSRPPPPHRLQRT-*ACSHQL 760
R SP P T PT PR P SP P +S P P +P PP P + + +
Sbjct: 245 RGSSPSPPTSPTPTPRPPSYSPSPTPPSSRP-SPPLRSPILTPPSPAAVPPIGRSPPSPI 303
Query: 759 PPAASFTRPSSTPPSAPARATTP 691
P S PSS PP++P ++P
Sbjct: 304 DPPCSSPEPSS-PPTSPPTPSSP 325
>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
plenty-of-prolines-101; serine/arginine repetitive matrix
protein 1 [Rattus norvegicus]
Length = 958
Score = 66.6 bits (161), Expect = 1e-09
Identities = 127/506 (25%), Positives = 179/506 (35%), Gaps = 14/506 (2%)
Frame = -2
Query: 1553 PRARGSPPVHKRPEARREPKRMREAVRFIERLPTRNSGARAPRENQTTPGRCPKATVSEN 1374
PR R SP P R P+RM R +R+ G R R + + G ++ S +
Sbjct: 368 PRRRPSPRRRPSPRRRTPPRRMPPPPRHRR---SRSPGRRRRRSSASLSGSSSSSSSSRS 424
Query: 1373 *LQ*AISP*CNHITSHTHTKRFAAAHNGSARRTAARPIVPRPAPRKPLIHKHTPSAAICS 1194
P TS K + + S R RP P P K +H+P+ +
Sbjct: 425 RSPPKKPP---KRTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKT---RHSPTPQQSN 478
Query: 1193 GSSKRIAACRRGR*RIAWSSGSASPQVSRVPKLPFAQRRESSLIAILLCQNGGALLPRIT 1014
+ K R++ S G S +V K ++RES A PR
Sbjct: 479 RARKS---------RVSVSPGRTS---GKVTKHKGTEKRESP---------SPAPKPRKV 517
Query: 1013 LQASSTRQPAR*SRASSRSLLALDDALGEQNHHGQERRRHDHATPVLLDLPLQRAHRVVH 834
+ S S +A D++ ++ Q RR++ ++ D +R+H V +
Sbjct: 518 ELSESEEDKG--------SKMAAADSVQQRR---QYRRQNQQSSSE--DERPKRSH-VKN 563
Query: 833 RDQHRRAAHHRRTDCNVLERVLISCRPPRR-----SPGPAARHRARRPGPPRPPGSAART 669
+ RR H + R PRR SP PA R R+ P PP PP R
Sbjct: 564 GEVGRRRRHSPSRSASPSPRKRQKETSPRRRRRSPSPPPARRRRSPSPAPPPPPPPPPRR 623
Query: 668 AGDPAGRAGAASHRQWPRTASGPPRRQRSHR*RRAGGPGPPCRRTCGGRQQRCGRACRRG 489
P PP R+R+ P PP RR ++ RR
Sbjct: 624 RRSPT-----------------PPPRRRT--------PSPPPRRRSPSPRRYSPPIQRRY 658
Query: 488 CRSPPP*RSQCRPAPCPRGPWGPSPAGATRGRGRRASWSPSP**PAHAAATGR-PRHQPS 312
SPPP R P P P+ PSP RR S SP P + R P
Sbjct: 659 SPSPPPKRRTASPPPPPKRRASPSPPPK-----RRVSHSPPPKQRSPPVTKRRSPSLSSK 713
Query: 311 HPRQPSRGWGTSWGR---P**R-----GPCGPRASRSPPP*RSRCRSPPGEKRWWWWTTP 156
H + S G T R P R P P+ S PP R SP G + +P
Sbjct: 714 HRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQ------SP 767
Query: 155 SPASQAARVTRLLLAPIGRAPETVRV 78
SP+++ R + R PE ++
Sbjct: 768 SPSTRPIR-------RVSRTPEPKKI 786
Score = 59.3 bits (142), Expect = 2e-07
Identities = 74/280 (26%), Positives = 103/280 (36%), Gaps = 1/280 (0%)
Frame = -1
Query: 1056 PAVPKRRRAAPQNYPPGKQHTAAGALIPRLLALLTGSR*CSWRAESPRPGTPPTRPRDPR 877
P P RRR +P PP ++ T + PR R+ SPR +PP + R
Sbjct: 617 PPPPPRRRRSPT--PPPRRRTPSPP--PRR------------RSPSPRRYSPPIQRRYSP 660
Query: 876 SPRPAAAASAPRCSPRSAPPSRPPPPHRLQRT*ACSHQLPPAASFTRPSSTPPSAPARAT 697
SP P ++P P+ PPP R+ + + PP PS + S + +
Sbjct: 661 SPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPPVTKRRSPSLS--SKHRKGS 718
Query: 696 TPARVSGENCRGPGWPGWRSFTSPVATYCFRPTSPAAKPPVTPGRGPRSSLPPYLRGSST 517
+P R S R P P R SP RP +P P RG +S P + S
Sbjct: 719 SPGR-STREARSP-QPNKRHSPSP------RPRAPQTSSPPPVRRGASAS-PQGRQSPSP 769
Query: 516 TMRP-RLPSRLPKPSSLTKPM*TGALPAGALGTFTGRGDEGSGTAGFLESFSLMTCSRSC 340
+ RP R SR P+P + K P + R GS
Sbjct: 770 STRPIRRVSRTPEPKKIKKA--ASPSPQSVRRVSSSRSVSGSP----------------- 810
Query: 339 HRPASPPAQPPTPTQSRLGYFLGSSLMTRPLRPSREPKPS 220
A P PP+P QS+ S P + ++ P PS
Sbjct: 811 EPTAKKPPAPPSPVQSQSPSTNWSP--AAPAKKAKSPTPS 848
Score = 51.6 bits (122), Expect = 4e-05
Identities = 44/143 (30%), Positives = 65/143 (44%), Gaps = 7/143 (4%)
Frame = +3
Query: 192 RRSTSASSRRRASARARAARAASSRTTPRSTPAATGLAWVAGLVARPACGSCVSRSLRRR 371
+ T SR R+ +R+R + S T PR + ++ RR
Sbjct: 328 KEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSY---------------SPRRRP 372
Query: 372 TPRSPPSPTPRRPCR*RSPRPPRARRRSTLASSRRRASAT---ATASAAASLLTTPASTA 542
+PR PSP R P R R P PPR RR + RRR+SA+ +++S+++S +P
Sbjct: 373 SPRRRPSPRRRTPPR-RMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSPPKKP 431
Query: 543 ARRTWAP----CPASPVASLPAR 599
+RT +P SP AS P R
Sbjct: 432 PKRTSSPPRKTRRLSPSASPPRR 454
Score = 42.7 bits (99), Expect = 0.018
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 363 RRRTPR-SPPSPTPRRPCR*RSPRPPRARRRSTLASSRRRASATATASAAASLLTTPAST 539
RRR+P +PP P P P R RSP PP RRR+ RRR+ + S +P+
Sbjct: 605 RRRSPSPAPPPPPPPPPRRRRSPTPP-PRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP 663
Query: 540 AARRTWAPCP 569
RRT +P P
Sbjct: 664 PKRRTASPPP 673
Score = 42.7 bits (99), Expect = 0.018
Identities = 38/140 (27%), Positives = 56/140 (39%), Gaps = 2/140 (1%)
Frame = +3
Query: 156 RCRPPPPALLPRRRSTSASSRRRASARARAARAASSRTTPRSTPAATGLAWVAGLVARPA 335
R PPPP RR + RRR+SA + ++SS + RS P P
Sbjct: 387 RRMPPPPR--HRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSPPKKP-----------PK 433
Query: 336 CGSCVSRSLRRRTPRSPPSPTPRRPCR*RSPRPPRARRRSTLASSR--RRASATATASAA 509
S R RR +P + P RP +P PP+ R T S R++ + +
Sbjct: 434 RTSSPPRKTRRLSPSASPPRRRHRPSSPATP-PPKTRHSPTPQQSNRARKSRVSVSPGRT 492
Query: 510 ASLLTTPASTAARRTWAPCP 569
+ +T T R + +P P
Sbjct: 493 SGKVTKHKGTEKRESPSPAP 512
Score = 40.8 bits (94), Expect = 0.069
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 3/161 (1%)
Frame = +3
Query: 102 PYWRQQQPCDPGCL*SR*RCRPPPPALLPRRRSTSASSRRRASARARAARAASSRTTPRS 281
P R+ P P R PPPP P+RR++ + +R + + + S T R
Sbjct: 653 PIQRRYSPSPPP---KRRTASPPPP---PKRRASPSPPPKRRVSHSPPPKQRSPPVTKRR 706
Query: 282 TPAATGLAWVAGLVARPACGSCVSRSLRRRT---PRSPPSPTPRRPCR*RSPRPPRARRR 452
+P+ L ++ GS RS R P SP+P RP ++ PP RR
Sbjct: 707 SPS---------LSSKHRKGSSPGRSTREARSPQPNKRHSPSP-RPRAPQTSSPPPVRRG 756
Query: 453 STLASSRRRASATATASAAASLLTTPASTAARRTWAPCPAS 575
++ AS + R S + + + TP ++ +P P S
Sbjct: 757 AS-ASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQS 796
Score = 40.0 bits (92), Expect = 0.12
Identities = 48/181 (26%), Positives = 67/181 (36%), Gaps = 5/181 (2%)
Frame = +3
Query: 165 PPPPALLPRRRSTSASSRRRASA-----RARAARAASSRTTPRSTPAATGLAWVAGLVAR 329
PPPP RRRS + RRR + R+ + R S R +P+ A
Sbjct: 615 PPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPP 674
Query: 330 PACGSCVSRSLRRRTPRSPPSPTPRRPCR*RSPRPPRARRRSTLASSRRRASATATASAA 509
P + S +RR SPP + PP +RRS SS+ R ++ S
Sbjct: 675 PKRRASPSPPPKRRVSHSPPP---------KQRSPPVTKRRSPSLSSKHRKGSSPGRSTR 725
Query: 510 ASLLTTPASTAARRTWAPCPASPVASLPARWA*SSTWPLAM*SCASPASRVPGSSRR*PW 689
+ P R + +P P +P S P P+ + ASP R S P
Sbjct: 726 EARSPQPNK---RHSPSPRPRAPQTSSPP--------PVRRGASASPQGRQSPSPSTRPI 774
Query: 690 R 692
R
Sbjct: 775 R 775
Score = 38.1 bits (87), Expect = 0.45
Identities = 37/133 (27%), Positives = 48/133 (35%), Gaps = 13/133 (9%)
Frame = -1
Query: 930 RAESPRPGTPPTRPRDPRSPRPAAAASAPRCSP---RSAPPSRPPPP----------HRL 790
R+ SP P R R +PR P R PP R PPP R
Sbjct: 346 RSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRR 405
Query: 789 QRT*ACSHQLPPAASFTRPSSTPPSAPARATTPARVSGENCRGPGWPGWRSFTSPVATYC 610
+R+ A ++S +R S P P R ++P R + P R
Sbjct: 406 RRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRR---------- 455
Query: 609 FRPTSPAAKPPVT 571
RP+SPA PP T
Sbjct: 456 HRPSSPATPPPKT 468
Score = 33.9 bits (76), Expect = 8.4
Identities = 44/156 (28%), Positives = 58/156 (36%), Gaps = 19/156 (12%)
Frame = +3
Query: 168 PPPALLPRRRSTSASSRRRASARARAARAASSRTTPRSTPAATGLAWVAGLVARPACGSC 347
P PA PR+ S S + S A A R R ++ RP
Sbjct: 508 PSPAPKPRKVELSESEEDKGSKMAAADSVQQRRQYRRQNQQSSSED------ERPKRSHV 561
Query: 348 VSRSLRRRTPRSPP---SPTPRR-------PCR*RSPRPPRARRRSTLASS--------- 470
+ + RR SP SP+PR+ R RSP PP ARRR + + +
Sbjct: 562 KNGEVGRRRRHSPSRSASPSPRKRQKETSPRRRRRSPSPPPARRRRSPSPAPPPPPPPPP 621
Query: 471 RRRASATATASAAASLLTTPASTAARRTWAPCPASP 578
RRR S T TP+ RR+ +P SP
Sbjct: 622 RRRRSPTPPPRR-----RTPSPPPRRRSPSPRRYSP 652
>gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]
Length = 1325
Score = 65.9 bits (159), Expect = 2e-09
Identities = 93/487 (19%), Positives = 177/487 (36%), Gaps = 8/487 (1%)
Frame = -1
Query: 1515 GSAPRTKADAGGSKVY*AVANPQQRGQSSAGKSDNTRQVSQSNSLRKLAAMSHQPMMQSH 1336
G P T AD G + A P+ A ++ + S+S ++ S S
Sbjct: 627 GCLPSTWADKNGVSMM-ITAQPELLASDCATENACKPETESSSSAPSASSSSASSSSSSA 685
Query: 1335 HITHTHKTLCSSSQRQCTADGGAPNCTAPGPQKT----PNTQTHTIGCNLQRQQQTYSSM 1168
+ SSS + AP+ ++ P + P++ + + + SS
Sbjct: 686 PSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSA 745
Query: 1167 PKGKVKNCVVQRFSISAGVKGAETPFRPTS*VLSHCHPAVPKRRRAAPQNYPPGKQHTAA 988
P + S S+ A + P+S S P+ + + P ++A
Sbjct: 746 PSASSSSAP----SSSSSAPSASSSSAPSS--SSSSAPSASSSSAPSSSSSAPSASSSSA 799
Query: 987 GALIPRLLALLTGSR*CSWRAESPRPGTPPTRPRDPRSPRPAAAASAPRCSPRSAPPSRP 808
+ + S + S P + + P S P++++SAP S SAP S
Sbjct: 800 PS---------SSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS 850
Query: 807 PPPHRLQRT*ACSHQLPPAASFTRPSSTPPSAPARATTPA----RVSGENCRGPGWPGWR 640
P + S P+AS + S+ SAP+ +++ A S + P
Sbjct: 851 SAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSS 910
Query: 639 SFTSPVATYCFRPTSPAAKPPVTPGRGPRSSLPPYLRGSSTTMRPRLPSRLPKPSSLTKP 460
S ++P A+ P+S ++ P SS +S++ P S P SS + P
Sbjct: 911 SSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAP 970
Query: 459 M*TGALPAGALGTFTGRGDEGSGTAGFLESFSLMTCSRSCHRPASPPAQPPTPTQSRLGY 280
+ + P+ + + + +A + S + + S ++P + P+
Sbjct: 971 SSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPS------ 1024
Query: 279 FLGSSLMTRPLRPSREPKPSSLTKPM*ISSWGEALVVVDDTFTCFTGSQGHTAAAGANRA 100
+S + P S P SS + P SS A + + + +++A ++ +
Sbjct: 1025 ---ASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSS 1081
Query: 99 SARNGAS 79
SA + +S
Sbjct: 1082 SAPSASS 1088
Score = 61.2 bits (147), Expect = 5e-08
Identities = 97/463 (20%), Positives = 167/463 (35%), Gaps = 7/463 (1%)
Frame = -1
Query: 1554 AKGSGQPSRPQTSGSAPRTKADAGGSKVY*AVANPQQRGQSSAGKSDNTRQVSQSNSLRK 1375
A S S ++ SA + A + S A ++ SSA + ++ S S+S
Sbjct: 673 ASSSSASSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPS 732
Query: 1374 LAAMSHQPMMQSHHITHTHKTLCSSSQRQCTADGGAPNCTAPGPQKTPNTQTHTIGCNLQ 1195
++ S S + SSS + AP+ ++ P+ + + +
Sbjct: 733 ASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSS---SSAPSASSSSAPSSSS 789
Query: 1194 RQQQTYSSMPKGKVKNCVVQRFSISAGVKGAETPFRPTS*VLSHCHPAVPKRRRAAPQNY 1015
SS + S SA + P +S P+ +A +
Sbjct: 790 SAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSS-----SAPSSSSSAPSASSSS 844
Query: 1014 PPGKQHTAAGALIPRLLALLTGSR*CSWRAESPRPGTPPTRPRDPRSPRPAAAASAPRCS 835
P +A A + S P + + P S P++++SAP S
Sbjct: 845 APSSSSSAPSA------------------SSSSAPSSSSSAPSASSSSAPSSSSSAPSAS 886
Query: 834 PRSAP---PSRPPPPHRLQRT*ACSHQLPPAASFTRPSSTPPSAPARATTPA----RVSG 676
SAP S P + S P A+S + PSS+ SAP+ +++ A S
Sbjct: 887 SSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSA 946
Query: 675 ENCRGPGWPGWRSFTSPVATYCFRPTSPAAKPPVTPGRGPRSSLPPYLRGSSTTMRPRLP 496
+ P S ++P A+ P+S ++ P + P SS SS++ P
Sbjct: 947 PSASSSSAPS-SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSS-APSSS 1004
Query: 495 SRLPKPSSLTKPM*TGALPAGALGTFTGRGDEGSGTAGFLESFSLMTCSRSCHRPASPPA 316
S P SS + P + + P+ + + S +A S S + S S P++ +
Sbjct: 1005 SSAPSASSSSAPSSSSSAPSAS----SSSAPSSSSSAPSASSSSAPSSSSSA--PSASSS 1058
Query: 315 QPPTPTQSRLGYFLGSSLMTRPLRPSREPKPSSLTKPM*ISSW 187
P+ + S +S + P S P SS + P SS+
Sbjct: 1059 SAPSSSSSSAP---SASSSSAPSSSSSAPSASSSSAPSSSSSF 1098
Score = 57.8 bits (138), Expect = 5e-07
Identities = 74/347 (21%), Positives = 135/347 (38%), Gaps = 1/347 (0%)
Frame = -1
Query: 1554 AKGSGQPSRPQTSGSAPRTKADAGGSKVY*AVANPQQRGQSSAGKSDNTRQVSQSNSLRK 1375
A S PS ++ SA + A + S + ++ SS+ S ++ S+S
Sbjct: 779 ASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP 838
Query: 1374 LAAMSHQPMMQSHHITHTHKTLCSSSQRQCTADGG-APNCTAPGPQKTPNTQTHTIGCNL 1198
A+ S P S + + + SSS +A AP+ ++ P + ++ + +
Sbjct: 839 SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS--SSS 896
Query: 1197 QRQQQTYSSMPKGKVKNCVVQRFSISAGVKGAETPFRPTS*VLSHCHPAVPKRRRAAPQN 1018
+ SS P + S + + P +S S + P +A +
Sbjct: 897 SAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAP----SASSS 952
Query: 1017 YPPGKQHTAAGALIPRLLALLTGSR*CSWRAESPRPGTPPTRPRDPRSPRPAAAASAPRC 838
P +A A A + S S + S + + P S P++++SAP
Sbjct: 953 SAPSSSSSAPSA--SSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSA 1010
Query: 837 SPRSAPPSRPPPPHRLQRT*ACSHQLPPAASFTRPSSTPPSAPARATTPARVSGENCRGP 658
S SAP S P + S P++S + PS++ SAP+ +++ S +
Sbjct: 1011 SSSSAPSSSSSAP-------SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSA--- 1060
Query: 657 GWPGWRSFTSPVATYCFRPTSPAAKPPVTPGRGPRSSLPPYLRGSST 517
P S ++P A+ P+S ++ P + P SS +L GS +
Sbjct: 1061 --PSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS-SSFLSGSGS 1104
Score = 45.8 bits (107), Expect = 0.002
Identities = 60/298 (20%), Positives = 108/298 (36%), Gaps = 3/298 (1%)
Frame = -1
Query: 1554 AKGSGQPSRPQTSGSAPRTKADAGGSKVY*AVANPQQRGQSSAGKSDNTRQVSQSNSLRK 1375
A S PS ++ SA + A + S A ++ SSA + ++ S S+S
Sbjct: 840 ASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAP 899
Query: 1374 LAAMSHQPMMQSHHITHTHKTLCSSSQRQCTADGGAPNCTAPGPQKTPNTQTHTIGCNLQ 1195
A+ S P S + SSS ++ AP+ ++ P++ + +
Sbjct: 900 SASSSSAPSSSS-----SSAPSASSSSAPSSSSSSAPSASS---SSAPSSSSSSAPSASS 951
Query: 1194 RQQQTYSSMPKGKVKNCVVQRFSISAGVKGAETPFRPTS*VLSHCHPAVPKRRRAAPQ-- 1021
+ SS + S + + P +S S + P +AP
Sbjct: 952 SSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSAS 1011
Query: 1020 -NYPPGKQHTAAGALIPRLLALLTGSR*CSWRAESPRPGTPPTRPRDPRSPRPAAAASAP 844
+ P +A A + S P + + P S P++++SAP
Sbjct: 1012 SSSAPSSSSSAPSA------------------SSSSAPSSSSSAPSASSSSAPSSSSSAP 1053
Query: 843 RCSPRSAPPSRPPPPHRLQRT*ACSHQLPPAASFTRPSSTPPSAPARATTPARVSGEN 670
S SAP S + S P++S + PS++ SAP+ +++ SG +
Sbjct: 1054 SASSSSAPSSSSSSAP------SASSSSAPSSSSSAPSASSSSAPSSSSSFLSGSGSD 1105
Score = 45.4 bits (106), Expect = 0.003
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Frame = +3
Query: 198 STSASSRRRASARARAARAASSRTTPRSTPAATGLAWVAGLVARPACGSCVSRSLRRRTP 377
S S+SS +S+ A +A ++S+ ++ S P+A+ + + + P+ S + S P
Sbjct: 824 SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP 883
Query: 378 RS-----PPSPTPRRPCR*RSPRPPRARRRSTLASSRRRASATATASAAASLLTTPASTA 542
+ P S + P S P + + ASS S++++++ +AS + P+S++
Sbjct: 884 SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSS 943
Query: 543 ARRTWAPCPASPVASLPARWA*SSTWPLAM*SCASPASRVPGSS 674
+ A ++P +S A A SS+ P + S S +S SS
Sbjct: 944 SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 987
Score = 43.1 bits (100), Expect = 0.014
Identities = 42/164 (25%), Positives = 79/164 (47%), Gaps = 5/164 (3%)
Frame = +3
Query: 198 STSASSRRRASARARAARAASSRTTPRSTPAATGLAWVAGLVARPACGSCVSRSLRRRTP 377
S S+SS +S+ A +A ++S+ ++ S P+A+ + + + P+ S + S P
Sbjct: 809 SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP 868
Query: 378 R----SPPSPTPRRPCR*RSPRPPRARRRSTLASSRRRASATATASAAASLLTTPASTAA 545
S PS + P S P + + ASS S++++++ +AS + P+S+++
Sbjct: 869 SASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSS 928
Query: 546 RRTWAPCPASPVASLPARWA*SSTWPLAM*SCA-SPASRVPGSS 674
A ++P +S SS+ P A S A S +S P +S
Sbjct: 929 SAPSASSSSAPSSS-------SSSAPSASSSSAPSSSSSAPSAS 965
Score = 42.0 bits (97), Expect = 0.031
Identities = 44/165 (26%), Positives = 78/165 (46%), Gaps = 8/165 (4%)
Frame = +3
Query: 204 SASSRRRASARARAARAASSRTTPRST---PAATGLAWVAGLVARPACG-----SCVSRS 359
SASS S+ + +A +ASS + P S+ P+A+ + + + P+ S S S
Sbjct: 932 SASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSS 991
Query: 360 LRRRTPRSPPSPTPRRPCR*RSPRPPRARRRSTLASSRRRASATATASAAASLLTTPAST 539
+ S PS + P S P + + +SS +S+++ SA++S + +S+
Sbjct: 992 APSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 1051
Query: 540 AARRTWAPCPASPVASLPARWA*SSTWPLAM*SCASPASRVPGSS 674
A + + P+S +S P+ A SS+ P + S S +S SS
Sbjct: 1052 APSASSSSAPSSSSSSAPS--ASSSSAPSSSSSAPSASSSSAPSS 1094
Score = 41.2 bits (95), Expect = 0.053
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Frame = +3
Query: 204 SASSRRRASARARAARAASSRTTPRST----PAATGLAWVAGLVARPACGSCVSRSLRRR 371
SASS S+ + +A +ASS + P S+ A++ A + + P+ S + S
Sbjct: 762 SASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSS 821
Query: 372 TP----RSPPSPTPRRPCR*RSPRPPRARRRSTLASSRRRASATATASAAASLLTTPAST 539
P S PS + P S P + + +SS +S+++ SA++S + +S+
Sbjct: 822 APSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 881
Query: 540 AARRTWAPCPASPVASLPARWA*SSTWPLAM*SCASPA--SRVPGSS 674
A + + P+S +S P+ A SS+ P + S A A S P SS
Sbjct: 882 APSASSSSAPSSSSSSAPS--ASSSSAPSSSSSSAPSASSSSAPSSS 926
Score = 40.4 bits (93), Expect = 0.090
Identities = 43/168 (25%), Positives = 81/168 (47%), Gaps = 5/168 (2%)
Frame = +3
Query: 198 STSASSRRRASARARAARAASSRTTPRSTPAATGLAWVAGLVARPACGSCVSRSLRRRTP 377
S S+SS +S+ A +A ++S+ ++ S P+A+ + + + P+ S + S P
Sbjct: 702 SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP 761
Query: 378 R----SPPSPTPRRPCR*RSPRPPRARRRSTLASSRRRASATATASAAASLLTTPASTAA 545
S PS + S P + + ASS S++++++ +AS + P+S+++
Sbjct: 762 SASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSS 821
Query: 546 RRTWAPCPASPVASLPARWA*SSTWPLAM*SCAS-PASRVPGSSRR*P 686
+ A ++P +S A A SS+ P + S S +S P SS P
Sbjct: 822 APS-ASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP 868
Score = 38.5 bits (88), Expect = 0.34
Identities = 40/163 (24%), Positives = 79/163 (47%), Gaps = 6/163 (3%)
Frame = +3
Query: 204 SASSRRRASARARAARAASSRTTPRST----PAATGLAWVAGLVARPACGSCVSRSLRRR 371
SASS S+ + +A +ASS + P S+ P+A+ + + + P+ S + S
Sbjct: 916 SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 975
Query: 372 TPRSPPSPTPRRPCR*RSPRPPRARRRSTLASSRRRASATATASAAASLLTTPASTAARR 551
P + S P S P + + +SS ++++++A +++S + +S++A
Sbjct: 976 APSASSSSAPSSS---SSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPS 1032
Query: 552 TWAPCPASPVASLPARWA*SSTWPLAM*SCA--SPASRVPGSS 674
+ + P++ +S P+ SS+ P A S A S +S P +S
Sbjct: 1033 SSSSAPSASSSSAPSS---SSSAPSASSSSAPSSSSSSAPSAS 1072
Score = 36.2 bits (82), Expect = 1.7
Identities = 28/115 (24%), Positives = 46/115 (39%)
Frame = -1
Query: 1554 AKGSGQPSRPQTSGSAPRTKADAGGSKVY*AVANPQQRGQSSAGKSDNTRQVSQSNSLRK 1375
A S PS ++ SA + A + S A ++ SSA + ++ S S+S
Sbjct: 1010 ASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAP 1069
Query: 1374 LAAMSHQPMMQSHHITHTHKTLCSSSQRQCTADGGAPNCTAPGPQKTPNTQTHTI 1210
A+ S P S + + + SSS + G C + P TP H++
Sbjct: 1070 SASSSSAPSSSSSAPSASSSSAPSSSSSFLSGSGSDGGCHSDVPYYTPTQVAHSM 1124
EST assemble image
|
|
|
|
|
|
clone |
accession |
position |
| 1 |
LCL029f08_r |
AV627625 |
0 |
537 |
| 2 |
MX223h02_r |
BP090433 |
1 |
201 |
| 3 |
CM025h04_r |
AV388083 |
4 |
477 |
| 4 |
LCL087c09_r |
AV630989 |
5 |
382 |
| 5 |
MXL054b09_r |
BP096183 |
6 |
390 |
| 6 |
MXL038c09_r |
BP095224 |
6 |
209 |
| 7 |
HC083g05_r |
AV638244 |
8 |
375 |
| 8 |
HCL021d11_r |
AV640730 |
8 |
318 |
| 9 |
MXL004e06_r |
BP093169 |
9 |
310 |
| 10 |
HC093c12_r |
AV638976 |
15 |
451 |
| 11 |
CM033e05_r |
AV388407 |
418 |
951 |
| 12 |
CM045f10_r |
AV389704 |
773 |
1117 |
| 13 |
HC064g06_r |
AV636827 |
799 |
1360 |
| 14 |
CM080c06_r |
AV392029 |
808 |
1289 |
| 15 |
LC031d06_r |
AV621113 |
821 |
1385 |
| 16 |
MX047c12_r |
BP087933 |
864 |
1265 |
| 17 |
HC015g08_r |
AV633026 |
914 |
1316 |
| 18 |
MX068e06_r |
BP088770 |
1068 |
1597 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute