Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001188A_C01 KCC001188A_c01
(584 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00081050.1| COG4608: ABC-type oligopeptide transport syst... 31 0.22
ref|NP_192311.1| plastid-lipid associated protein PAP/fibrillin,... 35 0.59
pir||T03635 plastid-lipid-associated protein pap - common tobacc... 35 0.77
ref|NP_768446.1| blr1806 [Bradyrhizobium japonicum] gi|12620514|... 35 1.0
pir||T10179 fibrillin-like protein CHRC, chromoplast - cucumber ... 34 1.3
>ref|ZP_00081050.1| COG4608: ABC-type oligopeptide transport system, ATPase component
[Geobacter metallireducens]
Length = 330
Score = 30.8 bits (68), Expect(2) = 0.22
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 516 TPLRVPVGCPL-PPCVFAGPVC 578
TPL P GCP P C +A PVC
Sbjct: 283 TPLNPPTGCPFHPRCPYAEPVC 304
Score = 25.0 bits (53), Expect(2) = 0.22
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 368 HQCRIALRHAIPNLTPSRSLHAELLRGFTPAAWDQPS 478
H AL A+P +TPS +L+G P + P+
Sbjct: 253 HPYTEALLSAVPRITPSEGKKRIILKGDPPTPLNPPT 289
>ref|NP_192311.1| plastid-lipid associated protein PAP/fibrillin, putative
[Arabidopsis thaliana] gi|7488105|pir||T01472 probable
fibrillin T24H24.16 - Arabidopsis thaliana
gi|3377825|gb|AAC28198.1| contains similarity to
fibrillins [Arabidopsis thaliana]
gi|7267158|emb|CAB77870.1| putative fibrillin
[Arabidopsis thaliana] gi|21539543|gb|AAM53324.1|
putative fibrillin [Arabidopsis thaliana]
gi|21553468|gb|AAM62561.1| putative fibrillin
[Arabidopsis thaliana] gi|23197880|gb|AAN15467.1|
putative fibrillin [Arabidopsis thaliana]
Length = 318
Score = 35.4 bits (80), Expect = 0.59
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1
Query: 542 TTYWDPERRVTRGDGGAVYIFKKAG 468
TTY D + R++RGDGG+VY+ K G
Sbjct: 288 TTYLDKDLRISRGDGGSVYVLIKEG 312
>pir||T03635 plastid-lipid-associated protein pap - common tobacco (fragment)
gi|2632088|emb|CAA75657.1| Plastid-lipid-Associated
Protein [Nicotiana tabacum]
Length = 270
Score = 35.0 bits (79), Expect = 0.77
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = -1
Query: 584 PPADWASKHTGRQR---TTYWDPERRVTRGDGGAVYIFKKAG 468
PP + ++ Q TTY D E R++RGDGG+V++ K G
Sbjct: 223 PPIKFPISNSNAQSWLLTTYLDHELRISRGDGGSVFVLIKEG 264
>ref|NP_768446.1| blr1806 [Bradyrhizobium japonicum]
gi|12620514|gb|AAG60790.1|AF322012_95 ID205
[Bradyrhizobium japonicum] gi|27350059|dbj|BAC47071.1|
blr1806 [Bradyrhizobium japonicum USDA 110]
Length = 484
Score = 34.7 bits (78), Expect = 1.0
Identities = 23/60 (38%), Positives = 27/60 (44%), Gaps = 1/60 (1%)
Frame = -2
Query: 571 GPANTQGGSGQPTGTRSGVSPAATAAPSTSSRRLVPSRWSEAPQQFSMKAA*WC-EVRDG 395
GP N Q SG PT T +P P +VP ++ P Q S A W EVRDG
Sbjct: 267 GPGNYQYASGAPTST----APVFFVPPPPPPLAMVPVAAAQVPTQSSQPAPVWSHEVRDG 322
>pir||T10179 fibrillin-like protein CHRC, chromoplast - cucumber
gi|1523992|emb|CAA64846.1| chromoplast-specific
carotenoid-associated protein, CHRC [Cucumis sativus]
gi|4138857|gb|AAD05165.1| chromoplast-specific
carotenoid-associated protein CHRC [Cucumis sativus]
Length = 322
Score = 34.3 bits (77), Expect = 1.3
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -1
Query: 542 TTYWDPERRVTRGDGGAVYIFKKAG 468
TTY D + R++RGDGG+V++ K G
Sbjct: 292 TTYLDEDLRISRGDGGSVFVLLKEG 316
