KCC001186A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001186A_C02 KCC001186A_c02
GCACGAGGTTTGTTGTAGCTTCAACTCACCAAAATCTATCACAATGGCGTCCGAGAAGTC
TTCTGGCACCTTCGCGGTCAAGGTGGGCCTGGCCCAGATGCTCAAGGGTGGCGTGATTAT
GGACGTGACCACCGCGGAGGAGGCGCGCATCGCCGAGGAGGCCGGTGCCGTGGCCGTGAT
GGCGCTGGAGCGTGTGCCCGCTGACATCCGTCGCGATGGCGGTGTTGCTCGCATGAGCGA
CCCCACCATGATTAAGGCCATCAAGGCCGCCGTGACCATCCCGGTGATGGCCAAGGCCCG
CATTGGCCACTTCGTGGAGGCTCAGATCCTGGAGGCTCTGGGCGTTGACTACATCGACGA
GTCGGAGGTGCTGACCCCCGCTGACGAGATCCACCACATCAACAAGCACAACTTCAAGGT
GCCCTTCGTGTGCGGCTGCCGCGATCTGGGTGAGGCCCTGCGCCGCATCGCCGAGGGCGC
CGCCATGATCCGCACCAAGGGCGAGGCCGGCACCGGCAACGTGGTGGAGGCCGTGCGCCA
CTGCCGCGCCGTCATGGGCGCCATCCGCCAGCTGCAGACCATGGACGACGACGAGCTGTA
CGTGTACGCCAAGGAGATCCGCGCGCCCGTGGAGCTGGTGCGCCAGGTCAAGACCCTGGG
CCGACTGCCCGTGGTCAACTTCGCCGCCGGCGGCGTGGCTACCCCCGCCGATGCCGCGCT
GATGATGCAGCTGGGCATGGACGGCGTGTTTGTGGGCAGCGGCATCTTCAAGAGCGGCGA
CCCCGCCTCGCGCGCCCGCGCCATCGTGCAGGCCGTGACGCACTACAACAACCCCGCGGT
TCTTGCCGAGGTCTCGTCTAACCTGGGCGAGCCCATGGTGGGCATTGACATCCGGGAGAA
GGGCTTCAACAGCTACGCCCAGCGCTCGGAGTAAATGCGCGCGTGCTTTTGCTTAGAGGA
CATGCGCTCAGTGGAGGTGATGGGCATGGTGAGCCTTACCGCGACGCAGGCCCAGCGCTC
GGAGTAGGCGCACGGTTCAAGGTGGCGGTGGACGTGTGATGGGCGTGACGGTTGTCTGGA
GCAAGCGGCAACGGACACGTGGGTGCAATGCGGTTTGTTCAGGTCAGGCGGTGTGTGCCT
GTTTGGTCGAGACCGGGACGGGTGGCGGGAGGTGATGCTGCGAGGGGCTGAGGTCGGCGG
CCGCCGGCTGCAACGGTCGGTGGTTGCGGGTAGATGCCAGCGATGGGGCGGCTCAAATCG
GAGGGCCGTGTGCATGACCGTGTGCGCGTGCGCCGGTGATGGGTTGCGGCTTTCGACGGA
GGAAAGGGTGAGGGGCGGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001186A_C02 KCC001186A_c02
         (1339 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK18310.1|AF344827_1 Sor-like protein [Ginkgo biloba]             467  e-130
dbj|BAC84589.1| putative ethylene-inducible protein [Oryza sativ...   455  e-127
sp|Q39963|ER1_HEVBR ETHYLENE-INDUCIBLE PROTEIN HEVER gi|2129913|...   448  e-124
ref|ZP_00017505.1| hypothetical protein [Chloroflexus aurantiacus]    445  e-124
ref|NP_195761.1| pyridoxine biosynthesis protein - like [Arabido...   445  e-124

>gb|AAK18310.1|AF344827_1 Sor-like protein [Ginkgo biloba]
          Length = 309

 Score =  467 bits (1201), Expect = e-130
 Identities = 232/288 (80%), Positives = 264/288 (91%)
 Frame = +2

Query: 68  TFAVKVGLAQMLKGGVIMDVTTAEEARIAEEAGAVAVMALERVPADIRRDGGVARMSDPT 247
           ++AVKVGLAQML+GGVIMDV  AE+ARIAEEAGA AVMALERVPADIR  GGVARMSDP 
Sbjct: 22  SYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAQGGVARMSDPG 81

Query: 248 MIKAIKAAVTIPVMAKARIGHFVEAQILEALGVDYIDESEVLTPADEIHHINKHNFKVPF 427
           +IK IK+AVTIPVMAKARIGHFVEAQILEA+G+DYIDESEVLTPAD+ HHINKHNF++PF
Sbjct: 82  LIKEIKSAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTPADDXHHINKHNFRIPF 141

Query: 428 VCGCRDLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHCRAVMGAIRQLQTMDDDELYVY 607
           VCGCR+LGEALRRIAEGAAMIRTKGEAGTGNV+EAVRH R+V+G IR+LQ++DDDE++ +
Sbjct: 142 VCGCRNLGEALRRIAEGAAMIRTKGEAGTGNVIEAVRHVRSVLGDIRKLQSLDDDEVFAF 201

Query: 608 AKEIRAPVELVRQVKTLGRLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFKSGDPA 787
           AK+I AP ELVRQ K LGRLPVVNFAAGGVATPADAALMMQLG DGVFVGSG+FKSGDPA
Sbjct: 202 AKQIAAPYELVRQTKQLGRLPVVNFAAGGVATPADAALMMQLGCDGVFVGSGVFKSGDPA 261

Query: 788 SRARAIVQAVTHYNNPAVLAEVSSNLGEPMVGIDIREKGFNSYAQRSE 931
            RARAIVQAVTHYN+P +LAEVS +LGE MVGI+++++    YA+RSE
Sbjct: 262 RRARAIVQAVTHYNDPHILAEVSCSLGEAMVGINLKDEKVERYAERSE 309

>dbj|BAC84589.1| putative ethylene-inducible protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 318

 Score =  455 bits (1170), Expect = e-127
 Identities = 234/294 (79%), Positives = 255/294 (86%)
 Frame = +2

Query: 50  SEKSSGTFAVKVGLAQMLKGGVIMDVTTAEEARIAEEAGAVAVMALERVPADIRRDGGVA 229
           S   S TF+VKVGLAQML+GGVIMDV T E+ARIAEEAGA AVMALERVPADIR  GGVA
Sbjct: 25  SNHKSATFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVA 84

Query: 230 RMSDPTMIKAIKAAVTIPVMAKARIGHFVEAQILEALGVDYIDESEVLTPADEIHHINKH 409
           RMSDP +I+ IK AVTIPVMAKARIGHFVEAQILEA+GVDY+DESEVLT AD+ HHINKH
Sbjct: 85  RMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADDAHHINKH 144

Query: 410 NFKVPFVCGCRDLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHCRAVMGAIRQLQTMDD 589
           NF+VPFVCGCRDLGEALRRI EGAAMIRTKGEAGTGNVVEAVRH R+VMG IR L+ MDD
Sbjct: 145 NFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHVRSVMGDIRALRNMDD 204

Query: 590 DELYVYAKEIRAPVELVRQVKTLGRLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIF 769
           DE++ YAK I AP +LV Q K LGRLPVV FAAGGVATPADAALMMQLG DGVFVGSGIF
Sbjct: 205 DEVFSYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGIF 264

Query: 770 KSGDPASRARAIVQAVTHYNNPAVLAEVSSNLGEPMVGIDIREKGFNSYAQRSE 931
           KSGDPA RARAIVQAVTHY++P +LAEVSS LGE MVGI++ +     +A RSE
Sbjct: 265 KSGDPARRARAIVQAVTHYSDPKILAEVSSGLGEAMVGINLSDPKVERFAARSE 318

>sp|Q39963|ER1_HEVBR ETHYLENE-INDUCIBLE PROTEIN HEVER gi|2129913|pir||S60047
           ethylene-responsive protein 1 - Para rubber tree
           gi|1209317|gb|AAA91063.1| ethylene-inducible protein
          Length = 309

 Score =  448 bits (1152), Expect = e-124
 Identities = 226/294 (76%), Positives = 255/294 (85%)
 Frame = +2

Query: 50  SEKSSGTFAVKVGLAQMLKGGVIMDVTTAEEARIAEEAGAVAVMALERVPADIRRDGGVA 229
           +E     F+VKVGLAQML+GGVIMDV   E+ARIAEEAGA AVMALERVPADIR  GGVA
Sbjct: 16  TETKKSPFSVKVGLAQMLRGGVIMDVVNPEQARIAEEAGACAVMALERVPADIRAQGGVA 75

Query: 230 RMSDPTMIKAIKAAVTIPVMAKARIGHFVEAQILEALGVDYIDESEVLTPADEIHHINKH 409
           RMSDP +IK IK +VTIPVMAKARIGHFVEAQILEA+G+DY+DESEVLTPADE +HINKH
Sbjct: 76  RMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKH 135

Query: 410 NFKVPFVCGCRDLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHCRAVMGAIRQLQTMDD 589
           NF++PFVCGCR+LGEALRRI EGAAMIRTKGEAGTGNV+EAVRH R+VMG IR L+ MDD
Sbjct: 136 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRHVRSVMGDIRLLRNMDD 195

Query: 590 DELYVYAKEIRAPVELVRQVKTLGRLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIF 769
           DE++ +AK+I AP +LV Q K LGRLPVV FAAGGVATPADAALMMQLG DGVFVGSG+F
Sbjct: 196 DEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGVF 255

Query: 770 KSGDPASRARAIVQAVTHYNNPAVLAEVSSNLGEPMVGIDIREKGFNSYAQRSE 931
           KSGDPA RARAIVQAVTHY++P +LAEVS  LGE MVGI++ +K    +A RSE
Sbjct: 256 KSGDPARRARAIVQAVTHYSDPDMLAEVSCGLGEAMVGINLNDKKVERFANRSE 309

>ref|ZP_00017505.1| hypothetical protein [Chloroflexus aurantiacus]
          Length = 293

 Score =  445 bits (1145), Expect = e-124
 Identities = 225/280 (80%), Positives = 252/280 (89%)
 Frame = +2

Query: 53  EKSSGTFAVKVGLAQMLKGGVIMDVTTAEEARIAEEAGAVAVMALERVPADIRRDGGVAR 232
           EKS  T+  KVGLAQMLKGGVIMDV T E+ARIAEEAGAVAVMALERVPADIR  GGVAR
Sbjct: 2   EKS--TWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVAR 59

Query: 233 MSDPTMIKAIKAAVTIPVMAKARIGHFVEAQILEALGVDYIDESEVLTPADEIHHINKHN 412
           MSDP +I AIK AVTIPVMAKARIGHFVEAQ+LEA+GVDYIDESEVLTPADE HHINKH 
Sbjct: 60  MSDPELILAIKQAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADEEHHINKHK 119

Query: 413 FKVPFVCGCRDLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHCRAVMGAIRQLQTMDDD 592
           F+VPFVCGCR+LGEALRR+AEGAAM+RTKGEAGTGNVVEAVRH RAV   IR+LQ+M++D
Sbjct: 120 FRVPFVCGCRNLGEALRRVAEGAAMLRTKGEAGTGNVVEAVRHARAVYSEIRRLQSMNED 179

Query: 593 ELYVYAKEIRAPVELVRQVKTLGRLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIFK 772
           EL+ YAK+I+AP ELV+QV T G+LPVVNFAAGG+ATPADAAL+MQLG+DG+FVGSGIFK
Sbjct: 180 ELFTYAKQIQAPYELVKQVATEGKLPVVNFAAGGIATPADAALLMQLGVDGIFVGSGIFK 239

Query: 773 SGDPASRARAIVQAVTHYNNPAVLAEVSSNLGEPMVGIDI 892
           SGDP  RARAIV+A THYN+P ++AEVS  LGE MVGI+I
Sbjct: 240 SGDPVKRARAIVEATTHYNDPEIIAEVSKGLGEAMVGINI 279

>ref|NP_195761.1| pyridoxine biosynthesis protein - like [Arabidopsis thaliana]
           gi|11358736|pir||T48163 pyridoxine biosynthesis
           protein-like - Arabidopsis thaliana
           gi|7320719|emb|CAB81924.1| pyridoxine biosynthesis
           protein-like [Arabidopsis thaliana]
           gi|16226309|gb|AAL16130.1|AF428298_1 AT5g01410/T10O8_120
           [Arabidopsis thaliana]
           gi|17933287|gb|AAL48227.1|AF446352_1 AT5g01410/T10O8_120
           [Arabidopsis thaliana] gi|20453411|gb|AAM19944.1|
           AT5g01410/T10O8_120 [Arabidopsis thaliana]
          Length = 309

 Score =  445 bits (1145), Expect = e-124
 Identities = 226/294 (76%), Positives = 253/294 (85%)
 Frame = +2

Query: 50  SEKSSGTFAVKVGLAQMLKGGVIMDVTTAEEARIAEEAGAVAVMALERVPADIRRDGGVA 229
           +E     F+VKVGLAQML+GGVIMDV  AE+ARIAEEAGA AVMALERVPADIR  GGVA
Sbjct: 16  TEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVA 75

Query: 230 RMSDPTMIKAIKAAVTIPVMAKARIGHFVEAQILEALGVDYIDESEVLTPADEIHHINKH 409
           RMSDP MIK IK AVTIPVMAKARIGHFVEAQILEA+G+DYIDESEVLT ADE HHINKH
Sbjct: 76  RMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTLADEDHHINKH 135

Query: 410 NFKVPFVCGCRDLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHCRAVMGAIRQLQTMDD 589
           NF++PFVCGCR+LGEALRRI EGAAMIRTKGEAGTGN++EAVRH R+V G IR L+ MDD
Sbjct: 136 NFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVNGDIRVLRNMDD 195

Query: 590 DELYVYAKEIRAPVELVRQVKTLGRLPVVNFAAGGVATPADAALMMQLGMDGVFVGSGIF 769
           DE++ +AK++ AP +LV Q K LGRLPVV FAAGGVATPADAALMMQLG DGVFVGSGIF
Sbjct: 196 DEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCDGVFVGSGIF 255

Query: 770 KSGDPASRARAIVQAVTHYNNPAVLAEVSSNLGEPMVGIDIREKGFNSYAQRSE 931
           KSGDPA RARAIVQAVTHY++P +L EVS  LGE MVGI++ ++    +A RSE
Sbjct: 256 KSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGINLNDEKVERFANRSE 309



EST assemble image


clone accession position
1 CM024e05_r AV388245 1 572
2 CM063d08_r AV390106 1 587
3 MXL048d06_r BP095855 6 436
4 LCL002g11_r AV626128 12 331
5 HCL050h03_r AV642380 13 453
6 HC057d05_r AV636278 15 463
7 HCL068d02_r AV643361 228 729
8 HC031c08_r AV634271 326 862
9 HC092c05_r AV638898 755 1186
10 HC018e10_r AV633251 756 1230
11 HC091h12_r AV638876 784 1263
12 CM045g12_r AV389733 792 1340
13 MX034c03_r BP087423 985 1245




Chlamydomonas reinhardtii
Kazusa DNA Research Institute