Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001182A_C01 KCC001182A_c01
(612 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q02764|RK24_TOBAC 50S RIBOSOMAL PROTEIN L24, CHLOROPLAST PREC... 139 3e-32
ref|NP_851190.1| 50S ribosomal protein L24, chloroplast precurso... 136 2e-31
emb|CAA70851.1| plastid ribosomal protein [Arabidopsis thaliana] 136 2e-31
sp|P11893|RK24_PEA 50S RIBOSOMAL PROTEIN L24, CHLOROPLAST PRECUR... 135 4e-31
ref|ZP_00074138.1| COG0198: Ribosomal protein L24 [Trichodesmium... 125 4e-28
>sp|Q02764|RK24_TOBAC 50S RIBOSOMAL PROTEIN L24, CHLOROPLAST PRECURSOR (CL24)
gi|322771|pir||A45113 ribosomal protein L24 precursor -
common tobacco gi|170273|gb|AAA34086.1| ribosomal
protein L24 gi|170324|gb|AAA34114.1| ribosomal protein
L24
Length = 187
Score = 139 bits (350), Expect = 3e-32
Identities = 73/148 (49%), Positives = 95/148 (63%), Gaps = 2/148 (1%)
Frame = +2
Query: 146 PRSAPPVAAYGDLPKIGGGR--KWEHLELGPGGKALRVPMHVKKGDTVQIIAGKDKGKVG 319
P S PP+ + P + + +WE E P + MHVK GDTV+II+G DKGKVG
Sbjct: 23 PLSLPPLVKSTEGPCLIQAKLKRWERKECKPNSLPVLHKMHVKLGDTVKIISGHDKGKVG 82
Query: 320 TIIKVLAKKGKVVVEGVNQGQKHLKPKMENETGQIKTLEFPIHHSNVMLYSKEKGVRSRV 499
I +++ KVVV+ VN KH+K + E+E GQI +E PIH SNVMLYSKE+ V SRV
Sbjct: 83 EITEIIKHNSKVVVKDVNLKTKHVKSRSEDEPGQIVKIEAPIHSSNVMLYSKEQKVASRV 142
Query: 500 GHKVLETGKKVRYLVKNGEISIKRHSWR 583
GHK L+ GK+VRYL+K GEI +W+
Sbjct: 143 GHKTLDNGKRVRYLIKTGEIIDSAENWK 170
>ref|NP_851190.1| 50S ribosomal protein L24, chloroplast precursor (CL24)
[Arabidopsis thaliana] gi|27735245|sp|P92959|RK24_ARATH
50S ribosomal protein L24, chloroplast precursor
gi|9758952|dbj|BAB09339.1| 50S ribosomal protein L24,
chloroplast precursor [Arabidopsis thaliana]
gi|21555440|gb|AAM63859.1| 50S ribosomal protein L24,
chloroplast precursor [Arabidopsis thaliana]
gi|25082791|gb|AAN72001.1| 50S ribosomal protein L24,
chloroplast precursor [Arabidopsis thaliana]
gi|30102926|gb|AAP21381.1| At5g54600 [Arabidopsis
thaliana]
Length = 198
Score = 136 bits (343), Expect = 2e-31
Identities = 65/127 (51%), Positives = 85/127 (66%)
Frame = +2
Query: 203 RKWEHLELGPGGKALRVPMHVKKGDTVQIIAGKDKGKVGTIIKVLAKKGKVVVEGVNQGQ 382
++WE E P + MHVK GDTV++I+G+DKGK+G + K+ +V++ VN
Sbjct: 53 KRWERKECKPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKT 112
Query: 383 KHLKPKMENETGQIKTLEFPIHHSNVMLYSKEKGVRSRVGHKVLETGKKVRYLVKNGEIS 562
KH+K + E E GQI +E PIH SNVMLYSKEK V SRVGHKVLE G+KVRYL+K GE+
Sbjct: 113 KHMKSREEGEPGQIVKIEAPIHSSNVMLYSKEKDVVSRVGHKVLEDGQKVRYLIKTGELI 172
Query: 563 IKRHSWR 583
W+
Sbjct: 173 DTIEKWK 179
>emb|CAA70851.1| plastid ribosomal protein [Arabidopsis thaliana]
Length = 198
Score = 136 bits (343), Expect = 2e-31
Identities = 64/127 (50%), Positives = 85/127 (66%)
Frame = +2
Query: 203 RKWEHLELGPGGKALRVPMHVKKGDTVQIIAGKDKGKVGTIIKVLAKKGKVVVEGVNQGQ 382
++WE E P + MHVK GDTV++I+G+DKGK+G + K+ +V++ VN
Sbjct: 53 KRWERKECKPNSLPILHKMHVKFGDTVKVISGRDKGKIGEVTKIFTHNSTIVIKDVNLKT 112
Query: 383 KHLKPKMENETGQIKTLEFPIHHSNVMLYSKEKGVRSRVGHKVLETGKKVRYLVKNGEIS 562
KH+K + E E GQI +E PIH SNVMLYSKEK + SRVGHKVLE G+KVRYL+K GE+
Sbjct: 113 KHMKSREEGEPGQIVKIEAPIHSSNVMLYSKEKDILSRVGHKVLEDGQKVRYLIKTGELI 172
Query: 563 IKRHSWR 583
W+
Sbjct: 173 DTIEKWK 179
>sp|P11893|RK24_PEA 50S RIBOSOMAL PROTEIN L24, CHLOROPLAST PRECURSOR (CL24)
gi|71307|pir||R5PM24 ribosomal protein L24 precursor,
chloroplast - garden pea gi|20873|emb|CAA32185.1|
unnamed protein product [Pisum sativum]
Length = 194
Score = 135 bits (341), Expect = 4e-31
Identities = 64/127 (50%), Positives = 84/127 (65%)
Frame = +2
Query: 203 RKWEHLELGPGGKALRVPMHVKKGDTVQIIAGKDKGKVGTIIKVLAKKGKVVVEGVNQGQ 382
++WE E P + +HVK GDTV++I+G +KG++G I K+ V+V+ +N
Sbjct: 53 KRWERKECKPNSLPVLHKLHVKVGDTVKVISGHEKGQIGEITKIFKHNSSVIVKDINLKT 112
Query: 383 KHLKPKMENETGQIKTLEFPIHHSNVMLYSKEKGVRSRVGHKVLETGKKVRYLVKNGEIS 562
KH+K E E GQI +E PIH SNVMLYSKEK V SRVGHKVLE GK+VRYL+K GEI
Sbjct: 113 KHVKSNQEGEPGQINKVEAPIHSSNVMLYSKEKDVTSRVGHKVLENGKRVRYLIKTGEII 172
Query: 563 IKRHSWR 583
+W+
Sbjct: 173 DSEENWK 179
>ref|ZP_00074138.1| COG0198: Ribosomal protein L24 [Trichodesmium erythraeum IMS101]
Length = 122
Score = 125 bits (315), Expect = 4e-28
Identities = 63/108 (58%), Positives = 80/108 (73%)
Frame = +2
Query: 236 GKALRVPMHVKKGDTVQIIAGKDKGKVGTIIKVLAKKGKVVVEGVNQGQKHLKPKMENET 415
GK +R +HVKKGDTVQIIAGKDKGKVG ++KVL K KV+V+ VN KH+KP+ E E+
Sbjct: 13 GKPIRYKVHVKKGDTVQIIAGKDKGKVGEVLKVLPKVSKVIVKDVNIITKHVKPQQEGES 72
Query: 416 GQIKTLEFPIHHSNVMLYSKEKGVRSRVGHKVLETGKKVRYLVKNGEI 559
G+I T E PIH SNVMLYS ++ V SR+ + + G+KVR L K GE+
Sbjct: 73 GKIVTTEAPIHSSNVMLYSTKQKVASRICYTFTDDGRKVRMLKKTGEV 120
