KCC001170A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001170A_C01 KCC001170A_c01
ATGCCGAACGCTACAACTATTAACTATACGCAATAGAAAACCTTCAATGAACAAGGTCAA
GTTGTGCGCGGTGGACGCAGTCTACAACAAGGAGGGCTCTGTCGTGAACGCGTTGAACGC
CTTCCTAGGCAAGCACCCTTTCGGCCCTTACAACCACCTCTCAGACGCCGCGCACGAGGT
GTAGCGACTGCGAAAGAAGGGCAAGGGCACGAAAGCGGACGTGCTCAAGGCGCTGCTGCA
GCAGTTCGCGGCGTCCCGCGGTGTTGACAAGGACGCGTTCGAGGAGCTACCAGCGCTTAT
GGAGCTCATGCGCGAGCGCAACGCCTACGCACACGCTTACAACGAGACATACCTCTTTAG
CGAGATCGAGAAGTGCAACTCTGACCTGTCGTCCGTCGGCAACGTGCTCTCGCTGATAAT
CAAGCCAGCCCCGCCCGCCGAGCCCACCGAGGGCGGGCACTGAGAGGAAGGTCCGGCCAG
GCCACGCACGTTTTGGGCACGGTGGCTGTGGCGCGGGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001170A_C01 KCC001170A_c01
         (518 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P13728|SGS3_DROYA Salivary glue protein SGS-3 precursor gi|85...    45  4e-04
ref|XP_320719.1| ENSANGP00000020181 [Anopheles gambiae] gi|30174...    44  0.002
ref|NP_041080.1| membrane glycoprotein [Equine herpesvirus 1] gi...    43  0.002
gb|AAK61485.1| glycoprotein gp2 [Equine herpesvirus 1]                 43  0.002
pir||T45462 membrane glycoprotein [imported] - equine herpesviru...    43  0.002

>sp|P13728|SGS3_DROYA Salivary glue protein SGS-3 precursor gi|85255|pir||S01360 salivary
           glue protein sgs-3 precursor - fruit fly  (Drosophila
           yakuba)
          Length = 263

 Score = 45.4 bits (106), Expect = 4e-04
 Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 17/144 (11%)
 Frame = +3

Query: 78  QSTTRRALS*TR*TPS*ASTLSALTTTSQTPRTRCSDCER--------RARARKRTCSRR 233
           +STTRR  + TR T +  +T +  TTT++ P TR +            R      T +RR
Sbjct: 79  KSTTRRTTTTTRQTTTRPTTTTTTTTTTRRPTTRSTTTRHTTTTTTTTRRPTTTTTTTRR 138

Query: 234 ---CCSSSRRPAVLT------RTRSRSYQRLWSSCASATPTHTLTTRHTSLARSRSATLT 386
                +++RRP   T       TRS + +    S  S  PTH  TT  TS   ++  T T
Sbjct: 139 PTTTTTTTRRPTTTTTTTRLPTTRSTTTRHTTKSTTSKRPTHETTT--TSKRPTQETTTT 196

Query: 387 CRPSATCSR**SSQPRPPSPPRAG 458
            R +       ++ P+P + P  G
Sbjct: 197 TRRATQA----TTTPKPTNKPGCG 216

 Score = 38.5 bits (88), Expect = 0.052
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
 Frame = +3

Query: 120 PS*ASTLSALTTTSQTPRTR-----CSDCERRA-RARKRTCSRRCCSSSR----RPAVLT 269
           P+ A T +  TTT+  P TR     C+D      R  +++ +RR  +++R    RP   T
Sbjct: 41  PTCAPTTTTTTTTTCAPPTRPPPPPCTDAPTTTKRTTEKSTTRRTTTTTRQTTTRPTTTT 100

Query: 270 RTRSRSYQRLWSSCASATPTHTLTTRHTSLARSRSATLTCRPSAT 404
            T + + +    +  S T  HT TT  T+   + + T T RP+ T
Sbjct: 101 TTTTTTRR---PTTRSTTTRHTTTTTTTTRRPTTTTTTTRRPTTT 142

>ref|XP_320719.1| ENSANGP00000020181 [Anopheles gambiae] gi|30174160|gb|EAA00415.2|
           ENSANGP00000020181 [Anopheles gambiae str. PEST]
          Length = 340

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 52/167 (31%), Positives = 67/167 (39%), Gaps = 10/167 (5%)
 Frame = -1

Query: 518 ARATATVPKTCVAWPDLPLSARPRWARRAGLA*LSARARCRRTTGQSCTSRSR*RGMS-- 345
           AR T   P  C +       AR RW+  +  A  ++RARCR +   +  +R   R  S  
Sbjct: 21  ARRTRCAPSACRSCR----CARSRWSSPSS-ARTTSRARCRPSRTATGRARRSLRSSSST 75

Query: 344 --RCKRVRRRCARA*AP*ALVAPRTRPCQHRGTPRTAAAAP*ARPLSCPCPSFAVATPRA 171
             R    RR C R  +P A  A      +HR T R A      R +  P P     TPR 
Sbjct: 76  AVRSTSGRRCCGRPRSPSATRAT----LRHRRTRRRAV-----RGMRRPRPP----TPRT 122

Query: 170 RRLRGGCKGRKGACLGRRSTRS------RQSPPCCRLRPPRTT*PCS 48
           R    GC+ R      R  TRS      R++   CR RP R   P +
Sbjct: 123 RTTTAGCRVRPSFPSSRSRTRSTCTTVRRRTRALCRERPDRPDRPAT 169

 Score = 36.2 bits (82), Expect = 0.26
 Identities = 36/104 (34%), Positives = 45/104 (42%)
 Frame = +3

Query: 144 ALTTTSQTPRTRCSDCERRARARKRTCSRRCCSSSRRPAVLTRTRSRSYQRLWSSCASAT 323
           A    S +PRT  S     ARAR+  C+   C S R     +R  S S  R  +S A   
Sbjct: 3   ASRAASTSPRTASS---TTARARRTRCAPSACRSCR--CARSRWSSPSSART-TSRARCR 56

Query: 324 PTHTLTTRHTSLARSRSATLTCRPSATCSR**SSQPRPPSPPRA 455
           P+ T T R     RS S+T      +T  R    +PR PS  RA
Sbjct: 57  PSRTATGRARRSLRSSSSTAV---RSTSGRRCCGRPRSPSATRA 97

>ref|NP_041080.1| membrane glycoprotein [Equine herpesvirus 1]
           gi|138350|sp|P28968|VGLX_HSVEB GLYCOPROTEIN X PRECURSOR
           gi|73738|pir||VGBEX1 glycoprotein X precursor - equine
           herpesvirus 1 (strain Ab4p) gi|330862|gb|AAB02506.1|
           membrane glycoprotein
          Length = 797

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 34/116 (29%), Positives = 50/116 (42%)
 Frame = +3

Query: 57  SSCARWTQSTTRRALS*TR*TPS*ASTLSALTTTSQTPRTRCSDCERRARARKRTCSRRC 236
           S+      ++T  A + T  TP+  ST +A TT++ TP +  +  E    A   T +   
Sbjct: 267 STSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTTDT 326

Query: 237 CSSSRRPAVLTRTRSRSYQRLWSSCASATPTHTLTTRHTSLARSRSATLTCRPSAT 404
            + S      T   S +     +S  SAT T   T  HTS   S  +T T  PS+T
Sbjct: 327 TTPSEATTATTSPESTTVS---ASTTSATTTAFTTESHTSPDSSTGSTSTAEPSST 379

>gb|AAK61485.1| glycoprotein gp2 [Equine herpesvirus 1]
          Length = 826

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 34/116 (29%), Positives = 50/116 (42%)
 Frame = +3

Query: 57  SSCARWTQSTTRRALS*TR*TPS*ASTLSALTTTSQTPRTRCSDCERRARARKRTCSRRC 236
           S+      ++T  A + T  TP+  ST +A TT++ TP +  +  E    A   T +   
Sbjct: 296 STSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTTDT 355

Query: 237 CSSSRRPAVLTRTRSRSYQRLWSSCASATPTHTLTTRHTSLARSRSATLTCRPSAT 404
            + S      T   S +     +S  SAT T   T  HTS   S  +T T  PS+T
Sbjct: 356 TTPSEATTATTSPESTTVS---ASTTSATTTAFTTESHTSPDSSTGSTSTAEPSST 408

>pir||T45462 membrane glycoprotein [imported] - equine herpesvirus 1
           gi|2114321|dbj|BAA20037.1| membrane glycoprotein [Equine
           herpesvirus 1]
          Length = 866

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 34/116 (29%), Positives = 50/116 (42%)
 Frame = +3

Query: 57  SSCARWTQSTTRRALS*TR*TPS*ASTLSALTTTSQTPRTRCSDCERRARARKRTCSRRC 236
           S+      ++T  A + T  TP+  ST +A TT++ TP +  +  E    A   T +   
Sbjct: 336 STSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTTDT 395

Query: 237 CSSSRRPAVLTRTRSRSYQRLWSSCASATPTHTLTTRHTSLARSRSATLTCRPSAT 404
            + S      T   S +     +S  SAT T   T  HTS   S  +T T  PS+T
Sbjct: 396 TTPSEATTATTSPESTTVS---ASTTSATTTAFTTESHTSPDSSTGSTSTAEPSST 448



EST assemble image


clone accession position
1 LC089b08_r AV625197 1 595
2 HC002h12_r AV632022 83 595
3 CM054f10_r AV390003 86 396
4 MX001b06_r BP086058 97 504
5 LC025b12_r AV620667 98 623
6 CM023d06_r AV387752 104 673
7 LCL084b04_r AV630774 114 606




Chlamydomonas reinhardtii
Kazusa DNA Research Institute