KCC001169A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001169A_C01 KCC001169A_c01
cCAACAGGCACATAAATGTCGCTCAAAATCCACTATTTCCCAGTTCCGGGCCGTGCGGAG
GTTGCGCGACTTTGCTTATCCATTGGAAACATCCCTTACGAGGATGTAATCTACACGGGG
GCCACATTTGGCGAGGCCAAGCCCAAGTTTCCATTCGGCCAAGTGCCGGTACTGGAGTTC
CCAGATGGCAAGATGCTCGCACAGTCGGGTGCCATTGACCGCTACACTGCGAAGCTGGCA
GGTCTGTACCCGGAGGACCCCATCCAGGCGGCGTTTGCAGACCAGGCCGTATTCCTGCTG
AATGACTTTACCGACCTGTTCTCGTCCAGCTACAGCCTGCCGCTCGAGGAGAAGATAAAG
GCGCGCCAGGACATGCTGGCGGGCAAGGGCGGCGAGAAGCTGAAGTTGCTGGAGAAGCTT
GTGGCCTCTATTGGCGACAAGTACCTGGCGGGCGCGAAGCTGTCGTACGCGGATCTGGCC
CTGTTTGTGTCATTCTCCACCATGATCTGCGGCCAGCTAGACGGTATCCCCAAGGACCTG
TTCAAGAACTACCCCGCGCTCAAGGCCTTCCGCAGCAGAATTGAACGGAGCCAGGCGTCA
GGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001169A_C01 KCC001169A_c01
         (603 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|O73888|PGD2_CHICK Glutathione-requiring prostaglandin D synth...   100  2e-20
gb|AAN85429.1| glutathione-S-transferase [Pyrocystis lunula]           93  3e-18
ref|XP_311545.1| ENSANGP00000010247 [Anopheles gambiae] gi|21295...    85  7e-16
gb|AAF36480.1| glutathione S-transferase 2 [Nematospiroides dubius]    84  1e-15
ref|NP_508625.1| glutathione S-Transferase (gst-11) [Caenorhabdi...    82  6e-15

>sp|O73888|PGD2_CHICK Glutathione-requiring prostaglandin D synthase
           (Glutathione-dependent PGD synthetase) (Prostaglandin-H2
           D-isomerase) (Hematopoietic prostaglandin D synthase)
           (H-PGDS) gi|3204175|emb|CAA07005.1| prostaglandin-D
           synthase [Gallus gallus]
          Length = 199

 Score =  100 bits (248), Expect = 2e-20
 Identities = 70/188 (37%), Positives = 100/188 (52%), Gaps = 1/188 (0%)
 Frame = +1

Query: 25  KIHYFPVPGRAEVARLCLSIGNIPYEDVIYTGATFGEAKPKFPFGQVPVLEFPDGKMLAQ 204
           K+ YF + GRAE+ R   +   I YED    GA + + KP  PFG+VP+LE  DG ++ Q
Sbjct: 5   KLTYFNLRGRAEICRYLFAYAGIKYEDHRLEGADWPKIKPTIPFGKVPILEV-DGVIIHQ 63

Query: 205 SGAIDRYTAKLAGLYPEDPIQAAFADQAVFLLNDFTDLFSSSYSLPLEEKIKARQDMLAG 384
           S AI RY A+ +GL  + P++ A AD  V  ++DF  LF  +     + K KA  D+L  
Sbjct: 64  SLAIARYLARESGLAGQTPVEQALADAIVDTIDDFMMLFPWA-EKNQDVKEKAFNDILTN 122

Query: 385 KGGEKLKLLEKLVASIGD-KYLAGAKLSYADLALFVSFSTMICGQLDGIPKDLFKNYPAL 561
           K  E LK L+     +GD K+  G  +++AD    V  +T++         DL   YP L
Sbjct: 123 KAPELLKDLDTF---LGDKKWFVGKSVTWADFYWDVCSTTLL-----SYKADLADKYPRL 174

Query: 562 KAFRSRIE 585
            A R R+E
Sbjct: 175 LALRDRVE 182

>gb|AAN85429.1| glutathione-S-transferase [Pyrocystis lunula]
          Length = 310

 Score = 92.8 bits (229), Expect = 3e-18
 Identities = 70/215 (32%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
 Frame = +1

Query: 19  SLKIHYFPVPGRAEVARLCLSIGNIPY-EDVIYTGATFGEAKPKFPFGQVPVLEFPDGKM 195
           S+K  YF V G  E  RL  ++G +PY +D I     + + KP  PFGQ+PV+     K 
Sbjct: 88  SIKFTYFTVEGGGECIRLAFALGGVPYIDDRIDMATQWKDMKPTTPFGQLPVMTVDGSKQ 147

Query: 196 LAQSGAIDRYTAKLAGLYPEDPIQAAFADQAVFLLNDFTDLFSSSY------------SL 339
           +AQS  + R   KLAGL PEDP++   A++ V L  D  D  + S              L
Sbjct: 148 IAQSQGMLRLACKLAGLIPEDPVEFLKAEEVVGLSWDMVDAITPSMQLDRRPYLYGCEGL 207

Query: 340 PLEEKIKARQDM---LAGKGGE---KLKLLEKLVASIGDKYLAGAKLSYADLALFVSFST 501
           PLE+  K   +M   L+   GE    L  L+ L+A  G  +  G K S A+  +     +
Sbjct: 208 PLEQLTKKAVEMREKLSAPDGEINRFLGYLDGLLAKNGTGWFVGNKPSLAECEMIPRLRS 267

Query: 502 MICGQLDGIPKDL-------------FKNYPALKA 567
           +  G  DG PK +             F   PA+KA
Sbjct: 268 LRKGNRDGFPKTIVDKHKNLMKMYWAFHELPAIKA 302

>ref|XP_311545.1| ENSANGP00000010247 [Anopheles gambiae] gi|21295062|gb|EAA07207.1|
           ENSANGP00000010247 [Anopheles gambiae str. PEST]
          Length = 220

 Score = 85.1 bits (209), Expect = 7e-16
 Identities = 68/184 (36%), Positives = 96/184 (51%), Gaps = 4/184 (2%)
 Frame = +1

Query: 25  KIHYFPVPGRAEVARLCLSIGNIPYEDVIYTGATFGEAKPKFPFGQVPVLEFPDGKMLAQ 204
           K++YF V    E  R  LS GN+P++DV  T   +   KP  P GQ+PVLE  DGK + Q
Sbjct: 22  KVYYFNVKALGEPLRFLLSYGNLPFDDVRITREEWPALKPTMPMGQMPVLEV-DGKKVHQ 80

Query: 205 SGAIDRYTAKLAGLYPEDPIQAAFADQAVFLLNDFTDLFSSSYSLPLEEKIKARQDMLAG 384
           S A+ RY A   GL   D  +    D  V  +NDF  L  +  S   +++IK ++  L  
Sbjct: 81  SVAMSRYLANQVGLAGADDWENLMIDTVVDTVNDFR-LKIAVVSYEPDDEIKEKK--LVT 137

Query: 385 KGGEKLKL-LEKL--VASIGDKYLAGAKLSYADLALFVSFSTMICGQLDGIPK-DLFKNY 552
              E +   LEKL  +A   + YLA +KLS+AD+     + T I   L+ + K DL  N+
Sbjct: 138 LNNEVIPFYLEKLDDIARDNNGYLANSKLSWADI-----YFTAILDYLNYMTKSDLVANH 192

Query: 553 PALK 564
           P L+
Sbjct: 193 PNLQ 196

>gb|AAF36480.1| glutathione S-transferase 2 [Nematospiroides dubius]
          Length = 204

 Score = 84.3 bits (207), Expect = 1e-15
 Identities = 61/193 (31%), Positives = 91/193 (46%), Gaps = 4/193 (2%)
 Frame = +1

Query: 25  KIHYFPVPGRAEVARLCLSIGNIPYEDVIYTGATFGEAKPKFPFGQVPVLEFPDGKMLAQ 204
           K+ YF   G  E AR   ++ +  YEDV  T  TF   K  FPFGQVPVLE  DG+ LAQ
Sbjct: 3   KLTYFNGRGAGECARQIFALADQKYEDVRLTQETFAPLKATFPFGQVPVLEV-DGQQLAQ 61

Query: 205 SGAIDRYTAKLAGLYPEDPIQAAFADQAVFLLNDFTDLFSSSYSLPL----EEKIKARQD 372
           S AI RY AK  G     P ++A  D       D+     + Y + L     +  K + D
Sbjct: 62  SQAICRYLAKTFGFAGATPFESALIDSPADAYTDYRAEMKTYYYMALGFMTGDVDKLKTD 121

Query: 373 MLAGKGGEKLKLLEKLVASIGDKYLAGAKLSYADLALFVSFSTMICGQLDGIPKDLFKNY 552
           +L     + L  + K        +L G K+S+ DL +    +  +    + +P +  + +
Sbjct: 122 VLLPARTKFLGFITKFPKKNSSGFLVGDKISWVDLLV----AEHVADMTNRVP-EYIEGF 176

Query: 553 PALKAFRSRIERS 591
           P +KA   RI+++
Sbjct: 177 PEVKAHMERIQQT 189

>ref|NP_508625.1| glutathione S-Transferase (gst-11) [Caenorhabditis elegans]
           gi|7434053|pir||T16717 hypothetical protein R11G1.3 -
           Caenorhabditis elegans gi|1086653|gb|AAA82318.1|
           Glutathione s-transferase protein 11 [Caenorhabditis
           elegans]
          Length = 203

 Score = 82.0 bits (201), Expect = 6e-15
 Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
 Frame = +1

Query: 16  MSLKIHYFPVPGRAEVARLCLSIGNIPYEDVIYTGATFGEAKPKFPFGQVPVLEFPDGKM 195
           M  K+ YF + GRAE ARL  +   + Y D     + + E K   P G++PVL + DG  
Sbjct: 1   MEYKLQYFNMMGRAEPARLIFAYAGVQYTDERVEKSAWPEIKATTPHGKLPVL-YVDGAK 59

Query: 196 LAQSGAIDRYTAKLAGLYPEDPIQAAFADQAVFLLNDF-TDLFSSSYSLPLEEKIKARQD 372
           LAQS  I+RY  K+ GL  E   + A  D+ V  + DF  ++          +K++  + 
Sbjct: 60  LAQSRVIERYLGKVFGLAGETDWETAKMDELVACVEDFLIEIQPWFKEQDNAKKVEIFKK 119

Query: 373 MLAGKGGEKLKLLEKLVASIGDKYLAGAKLSYADLALFVSFSTMICGQLDGIPKDLFKNY 552
           ++       +   E ++ + G  Y  G K+SYADLA+F  F  M    L G      + Y
Sbjct: 120 LIESTIIPFISAFENILVTNGTGYFVGDKISYADLAIFHIFWFMNSKILPG----ALRKY 175

Query: 553 PALKAFRSRI 582
           P L+ F  +I
Sbjct: 176 PKLQEFIEKI 185



EST assemble image


clone accession position
1 HC041e07_r AV635072 1 516
2 MX204b11_r BP089272 2 352
3 LC096d08_r AV625683 5 458
4 MX236h03_r BP091317 6 373
5 MX215e05_r BP089888 11 288
6 MX226g11_r BP090637 11 309
7 LC088c11_r AV625133 17 528
8 CM023d05_r AV387815 41 643
9 MX232e03_r BP091012 275 532




Chlamydomonas reinhardtii
Kazusa DNA Research Institute