KCC001168A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC001168A_C01 KCC001168A_c01
gaacacggtgctgtgtcaggagctggtgcgcttcaaccggctgctggaggtGGTGCACGA
GAGCTTGGCGGGGCTGCAGAAGGCATTGCGCGGCCTGGTGCTCATGAGCGGAGACCTGGA
GGCGCTGGGCAACGCCATGTATGACGGCCGCGTGCCAAAGCTGTGGATGGACAAGTCCTA
CCCCAGCCTCAAGCCGCTGGCCTCCTACGTGGCCGACCTCATAGAGCGCTGCCGCATGAT
GAGCGACTGGGTGGAGCACGGCCCCCCGCCCGTGTTCTGGATCAGCGGCTTCTACTTCAC
GCACGCCTTCCTGACCGGCGTGAAGCAGAACTACGCACGCCGCCAGCGCATCCCCATCGA
CACTATCACCTTCACCTACACCTGCATGCAGGGCCACGCCGACGACTACAAGACGGCGCC
GGAGGACGGCGCGCTCATCAGCGGCATGTTCGTGGAGGGCGCGCGCTGGGACCCCGAGTC
CTGCAAGCTGCAGGAGTCGCTCCCCAAGGTGCTGTTCAGCCCCGCGCCGCTGATAAAGCT
GTCGCCCTGCGACGCCGCGGAGCAGGCCACCTTCCCACACTATGAATGCCCGCTGTACCG
CACGCCCGAACGCCGGGGGTGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC001168A_C01 KCC001168A_c01
         (622 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_129770.1| similar to axonemal dynein heavy chain 7 [Homo ...   228  4e-59
ref|XP_340626.1| dynein heavy chain, putative [Trypanosoma bruce...   226  2e-58
dbj|BAA76788.2| KIAA0944 protein [Homo sapiens]                       223  2e-57
ref|NP_061720.1| axonemal dynein heavy chain 7 [Homo sapiens] gi...   223  2e-57
gb|AAC05809.1| Gene product with similarity to dynein beta subun...   223  2e-57

>ref|XP_129770.1| similar to axonemal dynein heavy chain 7 [Homo sapiens] [Mus
           musculus]
          Length = 315

 Score =  228 bits (582), Expect = 4e-59
 Identities = 108/206 (52%), Positives = 145/206 (69%)
 Frame = +2

Query: 2   NTVLCQELVRFNRLLEVVHESLAGLQKALRGLVLMSGDLEALGNAMYDGRVPKLWMDKSY 181
           NTVL QE+ RFN+LL  + ES   +QKA++GLV+MS +LE + +++ + ++P +WM KSY
Sbjct: 73  NTVLVQEMGRFNKLLITIRESCINIQKAIKGLVVMSTELEEVVSSILNVKIPAMWMGKSY 132

Query: 182 PSLKPLASYVADLIERCRMMSDWVEHGPPPVFWISGFYFTHAFLTGVKQNYARRQRIPID 361
           PSLKPL SYV D +ER + +  W E GPPPVFW+SGF+FT AFLTG +QNYAR+  IPID
Sbjct: 133 PSLKPLGSYVNDFLERLKFLQQWYEVGPPPVFWLSGFFFTQAFLTGAQQNYARKFTIPID 192

Query: 362 TITFTYTCMQGHADDYKTAPEDGALISGMFVEGARWDPESCKLQESLPKVLFSPAPLIKL 541
            + F Y  M     +YK APEDG  I G+F++GA WD ++ KL ES PKVL+   P++ L
Sbjct: 193 LLAFDYEVMDD--KEYKNAPEDGVYIHGLFLDGASWDRKTKKLAESHPKVLYDTVPVMWL 250

Query: 542 SPCDAAEQATFPHYECPLYRTPERRG 619
            PC  ++ +  P Y  PLY+T ERRG
Sbjct: 251 KPCKKSDISKRPSYVAPLYKTSERRG 276

>ref|XP_340626.1| dynein heavy chain, putative [Trypanosoma brucei]
            gi|33348661|gb|AAQ15985.1| dynein heavy chain, putative
            [Trypanosoma brucei]
          Length = 4246

 Score =  226 bits (577), Expect = 2e-58
 Identities = 109/206 (52%), Positives = 141/206 (67%)
 Frame = +2

Query: 2    NTVLCQELVRFNRLLEVVHESLAGLQKALRGLVLMSGDLEALGNAMYDGRVPKLWMDKSY 181
            NTVL QE +R+NRLL +V  +L  +Q A+ G V+MS DLE + NAMYDG+VP++W  +SY
Sbjct: 4002 NTVLLQESIRYNRLLFIVRRTLVDVQDAINGTVVMSADLEEVFNAMYDGKVPEVWKKRSY 4061

Query: 182  PSLKPLASYVADLIERCRMMSDWVEHGPPPVFWISGFYFTHAFLTGVKQNYARRQRIPID 361
            PSLKP  SYV DL+ER   +  W + GPP  FW+SGFYFT +FLTGV QNYAR+ +IPID
Sbjct: 4062 PSLKPFGSYVNDLVERLGFLQTWCDEGPPCTFWLSGFYFTQSFLTGVMQNYARKWKIPID 4121

Query: 362  TITFTYTCMQGHADDYKTAPEDGALISGMFVEGARWDPESCKLQESLPKVLFSPAPLIKL 541
             + + +T M+   +  + APEDG  I G+F+EGA WDP    L ES PK LF   PL+KL
Sbjct: 4122 KLIWQFTVMK--EETCEEAPEDGCYIYGLFLEGAGWDPVENALCESKPKELFVKFPLLKL 4179

Query: 542  SPCDAAEQATFPHYECPLYRTPERRG 619
             PC   +    P Y+CP Y+T +RRG
Sbjct: 4180 VPCRPQDLPDSPVYKCPCYKTTDRRG 4205

>dbj|BAA76788.2| KIAA0944 protein [Homo sapiens]
          Length = 4031

 Score =  223 bits (568), Expect = 2e-57
 Identities = 104/206 (50%), Positives = 143/206 (68%)
 Frame = +2

Query: 2    NTVLCQELVRFNRLLEVVHESLAGLQKALRGLVLMSGDLEALGNAMYDGRVPKLWMDKSY 181
            NTVL QE+ RFN+LL+ + +S   +QKA++GL +MS DLE + +++ + ++P++WM KSY
Sbjct: 3789 NTVLVQEMGRFNKLLKTIRDSCVNIQKAIKGLAVMSTDLEEVVSSILNVKIPEMWMGKSY 3848

Query: 182  PSLKPLASYVADLIERCRMMSDWVEHGPPPVFWISGFYFTHAFLTGVKQNYARRQRIPID 361
            PSLKPL SYV D + R + +  W E GPPPVFW+SGF+FT AFLTG +QNYAR+  IPID
Sbjct: 3849 PSLKPLGSYVNDFLARLKFLQQWYEVGPPPVFWLSGFFFTQAFLTGAQQNYARKYTIPID 3908

Query: 362  TITFTYTCMQGHADDYKTAPEDGALISGMFVEGARWDPESCKLQESLPKVLFSPAPLIKL 541
             + F Y  M+    +YK  PEDG  I G+F++GA W+ +  KL ES PK+L+   P++ L
Sbjct: 3909 LLGFDYEVMED--KEYKHPPEDGVFIHGLFLDGASWNRKIKKLAESHPKILYDTVPVMWL 3966

Query: 542  SPCDAAEQATFPHYECPLYRTPERRG 619
             PC  A+    P Y  PLY+T ERRG
Sbjct: 3967 KPCKRADIPKRPSYVAPLYKTSERRG 3992

>ref|NP_061720.1| axonemal dynein heavy chain 7 [Homo sapiens]
            gi|17225486|gb|AAL37427.1|AF327442_1 ciliary dynein heavy
            chain 7 [Homo sapiens]
          Length = 4024

 Score =  223 bits (568), Expect = 2e-57
 Identities = 104/206 (50%), Positives = 143/206 (68%)
 Frame = +2

Query: 2    NTVLCQELVRFNRLLEVVHESLAGLQKALRGLVLMSGDLEALGNAMYDGRVPKLWMDKSY 181
            NTVL QE+ RFN+LL+ + +S   +QKA++GL +MS DLE + +++ + ++P++WM KSY
Sbjct: 3782 NTVLVQEMGRFNKLLKTIRDSCVNIQKAIKGLAVMSTDLEEVVSSILNVKIPEMWMGKSY 3841

Query: 182  PSLKPLASYVADLIERCRMMSDWVEHGPPPVFWISGFYFTHAFLTGVKQNYARRQRIPID 361
            PSLKPL SYV D + R + +  W E GPPPVFW+SGF+FT AFLTG +QNYAR+  IPID
Sbjct: 3842 PSLKPLGSYVNDFLARLKFLQQWYEVGPPPVFWLSGFFFTQAFLTGAQQNYARKYTIPID 3901

Query: 362  TITFTYTCMQGHADDYKTAPEDGALISGMFVEGARWDPESCKLQESLPKVLFSPAPLIKL 541
             + F Y  M+    +YK  PEDG  I G+F++GA W+ +  KL ES PK+L+   P++ L
Sbjct: 3902 LLGFDYEVMED--KEYKHPPEDGVFIHGLFLDGASWNRKIKKLAESHPKILYDTVPVMWL 3959

Query: 542  SPCDAAEQATFPHYECPLYRTPERRG 619
             PC  A+    P Y  PLY+T ERRG
Sbjct: 3960 KPCKRADIPKRPSYVAPLYKTSERRG 3985

>gb|AAC05809.1| Gene product with similarity to dynein beta subunit [Homo sapiens]
          Length = 573

 Score =  223 bits (567), Expect = 2e-57
 Identities = 113/209 (54%), Positives = 143/209 (68%), Gaps = 3/209 (1%)
 Frame = +2

Query: 2   NTVLCQELVRFNRLLEVVHESLAGLQKALRGLVLMSGDLEALGNAMYDGRVPKLWMDKSY 181
           NTVL QEL+RFNRL +VV  SL  L +A++G VLMS +LE + N+M  G+VP +W  KSY
Sbjct: 330 NTVLRQELIRFNRLTKVVRRSLINLGRAIKGQVLMSSELEEVFNSMLVGKVPAMWAAKSY 389

Query: 182 PSLKPLASYVADLIERCRMMSDWVEHGPPPVFWISGFYFTHAFLTGVKQNYARRQRIPID 361
           PSLKPL  YVADL+ R     +W++ GPP VFWISGFYFT +FLTGV QNYAR+  IPID
Sbjct: 390 PSLKPLGGYVADLLARLTFFQEWIDKGPPVVFWISGFYFTQSFLTGVSQNYARKYTIPID 449

Query: 362 TITFTYTCMQGHADDYKTAPEDGALISGMFVEGARWDPESCKLQESLPKVLFSPAPLIKL 541
            I F +  +       +  PEDGA I G+F+EGARWD ++ ++ ESLPK+L+ P P+I L
Sbjct: 450 HIGFEFE-VTPQETVMENNPEDGAYIKGLFLEGARWDRKTMQIGESLPKILYDPLPIIWL 508

Query: 542 SPCDAAEQATFPH---YECPLYRTPERRG 619
            P    E A F H   Y CP+Y+T  RRG
Sbjct: 509 KP---GESAMFLHQDIYVCPVYKTSARRG 534



EST assemble image


clone accession position
1 MX021b11_r BP086951 1 388
2 CM023d01_r AV387755 45 622




Chlamydomonas reinhardtii
Kazusa DNA Research Institute