Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001153A_C01 KCC001153A_c01
(1062 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD62368.1| chimeric SDH2-RPS14 protein [Triticum aestivum] 231 1e-59
gb|AAH43859.1| Similar to succinate dehydrogenase complex, subun... 230 4e-59
ref|NP_198881.1| succinate dehydrogenase, iron-sulphur subunit, ... 229 5e-59
ref|NP_013059.1| Yeast succinate dehydrogenase (SDH) is a tetram... 229 6e-59
ref|NP_189374.1| succinate dehydrogenase, iron-sulphur subunit, ... 229 6e-59
>emb|CAD62368.1| chimeric SDH2-RPS14 protein [Triticum aestivum]
Length = 366
Score = 231 bits (590), Expect = 1e-59
Identities = 122/239 (51%), Positives = 153/239 (63%), Gaps = 5/239 (2%)
Frame = +1
Query: 46 MLPSLLTNARRGAQAALQPGFLSAFISTTSESLNAAATATG*QARTQPAPAGQAARLYKE 225
M + L A+A L P S +++ S + A P P K
Sbjct: 1 MAAAALLRRSPAARALLSPALSSRLVASKPHSSSPA-----------PPPPSSKPASTKT 49
Query: 226 FQIYRWNPDSDE-KPKYASYQVDINNCGPMMLDVLLKIKDEQDQTLSLRRSCREGICGSC 402
F IYRW+PDS KP Y+VD+++CGPM+LD LLKIK+EQD +L+ RRSCREGICG+C
Sbjct: 50 FSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDALLKIKNEQDPSLTFRRSCREGICGTC 109
Query: 403 AMNIDGSNTLACLCKVNRDPGHVGKVAPLPHMFVVKDLVVDMANFYAQYKSIKPYLQKKE 582
AMNIDG N LACL K++ + ++PLPHMFVVKDLVVDM NFY QYKS++P+L++K+
Sbjct: 110 AMNIDGDNGLACLTKISSEAAGASTISPLPHMFVVKDLVVDMTNFYNQYKSVEPWLKRKD 169
Query: 583 --AAKGQEFYQSKESRAKLDGLYECILCACCSTSWPQLL--VEQRQVPGACSAAGRVPL 747
AA G+E YQSK RAKLDG+YECILCACCSTS P E+ P A A R+PL
Sbjct: 170 PPAAGGKEIYQSKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAALLHANRLPL 228
>gb|AAH43859.1| Similar to succinate dehydrogenase complex, subunit B, iron sulfur
(Ip) [Xenopus laevis]
Length = 282
Score = 230 bits (586), Expect = 4e-59
Identities = 112/173 (64%), Positives = 138/173 (79%), Gaps = 3/173 (1%)
Frame = +1
Query: 175 ARTQPAPAGQAARLYKEFQIYRWNPDSD-EKPKYASYQVDINNCGPMMLDVLLKIKDEQD 351
A+T APA QAA K+F IYRW+PD +KP+ +Y+VD+N CGPM+LD L+KIK+E D
Sbjct: 27 AQTAAAPASQAAARIKKFAIYRWDPDKPGDKPRMQTYEVDLNTCGPMVLDALIKIKNEVD 86
Query: 352 QTLSLRRSCREGICGSCAMNIDGSNTLACLCKVNRDPGHVGKVAPLPHMFVVKDLVVDMA 531
TL+ RRSCREGICGSCAMNI+G NTLAC +++ + V K+ PLPHM+VVKDLV D++
Sbjct: 87 PTLTFRRSCREGICGSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLS 146
Query: 532 NFYAQYKSIKPYLQKK-EAAKGQEFY-QSKESRAKLDGLYECILCACCSTSWP 684
NFYAQYKSI+PYL+KK E+ +G+E Y QS E R KLDGLYECILCACCSTS P
Sbjct: 147 NFYAQYKSIEPYLKKKDESQQGKEQYLQSIEDRDKLDGLYECILCACCSTSCP 199
Score = 126 bits (316), Expect = 7e-28
Identities = 56/89 (62%), Positives = 66/89 (73%)
Frame = +2
Query: 641 CTSASCAPAAPPPGPSYWWNSDKYLGPAVLLAAYRWIIDSRDDMTSERMKEVDDAYKLYR 820
C S SC PSYWWN+DKYLGPAVL+ AYRW+IDSRDD T ER+ ++ D + LYR
Sbjct: 193 CCSTSC--------PSYWWNADKYLGPAVLMQAYRWMIDSRDDFTEERLSKLQDPFSLYR 244
Query: 821 CKTIMNCATVCPKGLNPGKAINKIKQSLA 907
C TIMNC CPKGLNPGKAI +IK+ +A
Sbjct: 245 CHTIMNCTRTCPKGLNPGKAIAEIKKMMA 273
>ref|NP_198881.1| succinate dehydrogenase, iron-sulphur subunit, mitochondrial
(sdh2-2) [Arabidopsis thaliana]
gi|9758093|dbj|BAB08537.1| succinate dehydrogenase
iron-protein subunit [Arabidopsis thaliana]
gi|18377692|gb|AAL66996.1| putative succinate
dehydrogenase iron-protein subunit [Arabidopsis
thaliana] gi|21689851|gb|AAM67569.1| putative succinate
dehydrogenase iron-protein subunit [Arabidopsis
thaliana]
Length = 280
Score = 229 bits (585), Expect = 5e-59
Identities = 113/196 (57%), Positives = 144/196 (72%), Gaps = 2/196 (1%)
Frame = +1
Query: 103 GFLSAFISTTSESLNAAATATG*QARTQPAPAGQAARLYKEFQIYRWNPDSDEKPKYASY 282
G S+ +ST + + A T+TG +A+++ + G A L K FQIYRWNPD+ KP+ Y
Sbjct: 11 GTKSSRLSTAARLIPARWTSTGSEAQSKASTGGGGASL-KTFQIYRWNPDNPGKPELQDY 69
Query: 283 QVDINNCGPMMLDVLLKIKDEQDQTLSLRRSCREGICGSCAMNIDGSNTLACLCKVNRDP 462
++D+ +CGPM+LD L+KIK+E D +L+ RRSCREGICGSCAMNIDG N LACL K+
Sbjct: 70 KIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGS 129
Query: 463 GHVGKVAPLPHMFVVKDLVVDMANFYAQYKSIKPYLQKKEAAK--GQEFYQSKESRAKLD 636
+ PLPHMFV+KDLVVDM NFY QYKSI+P+L++K A G+E QSK+ RAKLD
Sbjct: 130 KET-TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQSKKDRAKLD 188
Query: 637 GLYECILCACCSTSWP 684
G+YECILCACCSTS P
Sbjct: 189 GMYECILCACCSTSCP 204
Score = 117 bits (293), Expect = 3e-25
Identities = 54/91 (59%), Positives = 61/91 (66%)
Frame = +2
Query: 641 CTSASCAPAAPPPGPSYWWNSDKYLGPAVLLAAYRWIIDSRDDMTSERMKEVDDAYKLYR 820
C S SC PSYWWN + YLGPA LL A RWI DSRD+ T ER++ +DD +KLYR
Sbjct: 198 CCSTSC--------PSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYR 249
Query: 821 CKTIMNCATVCPKGLNPGKAINKIKQSLAKG 913
C TI+NCA CPKGLNPGK I IKQ G
Sbjct: 250 CHTILNCARACPKGLNPGKQITHIKQLQKSG 280
>ref|NP_013059.1| Yeast succinate dehydrogenase (SDH) is a tetramer of non-equivalent
subunits--Sdh1p, Sdh2p, Sdh3p, Sdh4p--that couples the
oxidation of succinate to the transfer of electrons to
ubiquinone.; Sdh2p [Saccharomyces cerevisiae]
gi|118619|sp|P21801|DHSB_YEAST Succinate dehydrogenase
[ubiquinone] iron-sulfur protein, mitochondrial
precursor (IP) gi|66072|pir||RDBYIS succinate
dehydrogenase (ubiquinone) (EC 1.3.5.1) iron-sulfur
protein precursor - yeast (Saccharomyces cerevisiae)
gi|172549|gb|AAA35021.1| succinate dehydrogenase
iron-protein subunit (SDH) (EC 1.3.99.1)
gi|1360235|emb|CAA97492.1| SDH2 [Saccharomyces
cerevisiae]
Length = 266
Score = 229 bits (584), Expect = 6e-59
Identities = 119/203 (58%), Positives = 137/203 (66%), Gaps = 2/203 (0%)
Frame = +1
Query: 115 AFISTTSESLNAAATATG*QARTQPAPAGQAARLYKEFQIYRWNPDSDE-KPKYASYQVD 291
AF T + + A TA A RL K F++YRWNPD KP SYQVD
Sbjct: 10 AFCLVTKKGMATATTAA----------ATHTPRL-KTFKVYRWNPDEPSAKPHLQSYQVD 58
Query: 292 INNCGPMMLDVLLKIKDEQDQTLSLRRSCREGICGSCAMNIDGSNTLACLCKVNRDPGHV 471
+N+CGPM+LD LLKIKDEQD TL+ RRSCREGICGSCAMNI G NTLAC+CK++++
Sbjct: 59 LNDCGPMVLDALLKIKDEQDSTLTFRRSCREGICGSCAMNIGGRNTLACICKIDQNESKQ 118
Query: 472 GKVAPLPHMFVVKDLVVDMANFYAQYKSIKPYLQKKEAAK-GQEFYQSKESRAKLDGLYE 648
K+ PLPHMF+VKDLV D+ NFY QYKSI+PYLQ+ K G E QS E R KLDGLYE
Sbjct: 119 LKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQRSSFPKDGTEVLQSIEDRKKLDGLYE 178
Query: 649 CILCACCSTSWPQLLVEQRQVPG 717
CILCACCSTS P Q Q G
Sbjct: 179 CILCACCSTSCPSYWWNQEQYLG 201
Score = 113 bits (282), Expect = 6e-24
Identities = 52/89 (58%), Positives = 62/89 (69%)
Frame = +2
Query: 641 CTSASCAPAAPPPGPSYWWNSDKYLGPAVLLAAYRWIIDSRDDMTSERMKEVDDAYKLYR 820
C S SC PSYWWN ++YLGPAVL+ AYRW+IDSRD T R ++++ LYR
Sbjct: 184 CCSTSC--------PSYWWNQEQYLGPAVLMQAYRWLIDSRDQATKTRKAMLNNSMSLYR 235
Query: 821 CKTIMNCATVCPKGLNPGKAINKIKQSLA 907
C TIMNC CPKGLNPG AI +IK+SLA
Sbjct: 236 CHTIMNCTRTCPKGLNPGLAIAEIKKSLA 264
>ref|NP_189374.1| succinate dehydrogenase, iron-sulphur subunit, mitochondrial
(sdh2-1) [Arabidopsis thaliana]
gi|7939510|dbj|BAA95713.1| succinate dehydrogenase
iron-protein subunit [Arabidopsis thaliana]
gi|14334680|gb|AAK59518.1| putative succinate
dehydrogenase iron-protein subunit [Arabidopsis
thaliana] gi|17104677|gb|AAL34227.1| putative succinate
dehydrogenase iron-protein subunit [Arabidopsis
thaliana]
Length = 279
Score = 229 bits (584), Expect = 6e-59
Identities = 110/190 (57%), Positives = 140/190 (72%), Gaps = 2/190 (1%)
Frame = +1
Query: 121 ISTTSESLNAAATATG*QARTQPAPAGQAARLYKEFQIYRWNPDSDEKPKYASYQVDINN 300
++T + + A T+TG +A T+ + G K FQIYRWNPD+ KP+ +YQ+D+ +
Sbjct: 17 LATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPDNPGKPELQNYQIDLKD 76
Query: 301 CGPMMLDVLLKIKDEQDQTLSLRRSCREGICGSCAMNIDGSNTLACLCKVNRDPGHVGKV 480
CGPM+LD L+KIK+E D +L+ RRSCREGICGSCAMNIDG N LACL K+ +D +
Sbjct: 77 CGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKI-QDEASETTI 135
Query: 481 APLPHMFVVKDLVVDMANFYAQYKSIKPYLQKKEAAK--GQEFYQSKESRAKLDGLYECI 654
PLPHMFV+KDLVVDM NFY QYKSI+P+L++K A +E QSK+ RAKLDG+YECI
Sbjct: 136 TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQSKKDRAKLDGMYECI 195
Query: 655 LCACCSTSWP 684
LCACCSTS P
Sbjct: 196 LCACCSTSCP 205
Score = 117 bits (292), Expect = 4e-25
Identities = 53/86 (61%), Positives = 60/86 (69%)
Frame = +2
Query: 641 CTSASCAPAAPPPGPSYWWNSDKYLGPAVLLAAYRWIIDSRDDMTSERMKEVDDAYKLYR 820
C S SC PSYWWN + YLGPA LL A RWI DSRD+ T ER++ +DD +KLYR
Sbjct: 199 CCSTSC--------PSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYR 250
Query: 821 CKTIMNCATVCPKGLNPGKAINKIKQ 898
C TI+NCA CPKGLNPGK I IKQ
Sbjct: 251 CHTILNCARACPKGLNPGKQITHIKQ 276
