Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC001152A_C01 KCC001152A_c01
(552 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_628156.1| putative membrane protein [Streptomyces coelico... 39 0.061
ref|XP_228426.1| similar to Transcription factor-like protein MR... 37 0.18
ref|NP_036234.2| arginine-glutamic acid dipeptide (RE) repeats; ... 37 0.23
dbj|BAB12701.1| P0671B11.17 [Oryza sativa (japonica cultivar-gro... 36 0.30
gb|AAD27584.1|AF118275_1 atrophin-related protein ARP [Homo sapi... 36 0.30
>ref|NP_628156.1| putative membrane protein [Streptomyces coelicolor A3(2)]
gi|15021256|emb|CAC44697.1| putative membrane protein
[Streptomyces coelicolor A3(2)]
Length = 221
Score = 38.5 bits (88), Expect = 0.061
Identities = 28/84 (33%), Positives = 39/84 (46%)
Frame = +1
Query: 28 GPLADALGVL*PPSRSLLKHGV*GGPREPGTYYTPPAASRMAGRWSCAGARAPSRGPSYV 207
GPL L ++ P RS+ G EPG+ TPP ++ AGR AG A + +
Sbjct: 137 GPLESVLSLMGPNGRSVRMRCAVGAEDEPGSCETPPESTGGAGRGGLAGYSAVA---EFA 193
Query: 208 RLVVEAAATEVAWRTGLAARGQAN 279
RL A + R G A G++N
Sbjct: 194 RL---AGYGPLLLRAGSGAEGESN 214
>ref|XP_228426.1| similar to Transcription factor-like protein MRGX (MORF-related gene
X protein) (MSL3-2 protein) [Rattus norvegicus]
Length = 2298
Score = 37.0 bits (84), Expect = 0.18
Identities = 41/182 (22%), Positives = 62/182 (33%), Gaps = 15/182 (8%)
Frame = -2
Query: 503 THANHVSTTNQTGHLAPNLMTATTPSCVASRRNDTARANAQSADTNQVTVPCARWTHRA* 324
+H N + + + T+ PS R R+N S +V +R T R
Sbjct: 1238 SHLNECGPEKKCPSVKDSRSTSRGPSAGKDRPGRRGRSNKSSPTEESRSVEGSRSTSRGP 1297
Query: 323 LSIQQRESARPTKPLLACPRAASPVRQATSVAAASTTNRTYDGPREGARAPAHDHRPAMR 144
+ + R R P +SP ++ SV + +T+R GP G P P
Sbjct: 1298 SAGKDRPGRR------GYPNKSSPKKEGPSVKGSRSTSR---GPSAGKDHPGRRSYPNKS 1348
Query: 143 DAAGGV*YVPGSRGPPHTPCFRSERDGGHSTP---------------RASANGPTTFPKR 9
V GSR P +R G P R+++ GP+ R
Sbjct: 1349 SPKKEGPSVKGSRSTSRGPSAGKDRPGRRGYPNKSSPKKEGPSVKGSRSTSRGPSAGKDR 1408
Query: 8 PG 3
PG
Sbjct: 1409 PG 1410
Score = 35.8 bits (81), Expect = 0.40
Identities = 38/162 (23%), Positives = 55/162 (33%), Gaps = 15/162 (9%)
Frame = -2
Query: 443 TATTPSCVASRRNDTARANAQSADTNQVTVPCARWTHRA*LSIQQRESARPTKPLLACPR 264
T+ PS R N + +V +R T R + + R R P
Sbjct: 908 TSRGPSAGKDRSGGRGHTNKSGSAEESHSVEGSRSTSRGPSAGKDRPGRR------GYPN 961
Query: 263 AASPVRQATSVAAASTTNRTYDGPREGARAPAHDHRPAMRDAAGGV*YVPGSRGPPHTPC 84
+SP ++ SV + +T+R GP G P P V GSR P
Sbjct: 962 KSSPKKEGPSVKGSRSTSR---GPSTGKDRPGRRGYPNKNSPKKEGPSVKGSRSTSRGPS 1018
Query: 83 FRSERDGGHSTP---------------RASANGPTTFPKRPG 3
+R GG P R+++ GP+ RPG
Sbjct: 1019 AGKDRPGGRGYPNKSSPKKEGPSVKGSRSTSRGPSAGKDRPG 1060
>ref|NP_036234.2| arginine-glutamic acid dipeptide (RE) repeats; atrophin 1-like;
arginine glutamic acid dipeptide RE repeats [Homo
sapiens] gi|8096340|dbj|BAA95898.1| RERE [Homo sapiens]
Length = 1566
Score = 36.6 bits (83), Expect = 0.23
Identities = 30/92 (32%), Positives = 43/92 (46%)
Frame = -3
Query: 292 PRNLYWLVREQQALSAKQLPSQQPPQPIARTMDHARVRGHPRTTTVPPCVMRLAACSTCQ 113
P L Q AL ++Q P +QP P M H + P TT +P +LAA
Sbjct: 894 PHTSLQLPASQSALQSQQPPREQPLPPGPLAMPHIK---PPPTTPIP----QLAA----- 941
Query: 112 ARAGRLTPHVSGASGTAVTAHRERRPTGQPLS 17
+A + PH+SG S ++ A+ P +PLS
Sbjct: 942 PQAHKHPPHLSGPSPFSMNANLPPPPALKPLS 973
>dbj|BAB12701.1| P0671B11.17 [Oryza sativa (japonica cultivar-group)]
Length = 314
Score = 36.2 bits (82), Expect = 0.30
Identities = 36/114 (31%), Positives = 47/114 (40%), Gaps = 11/114 (9%)
Frame = -2
Query: 455 PNLMTATTPSCVAS--RRNDTARANAQSADTNQVTVPCAR----WTHR--A*LSIQQRES 300
P + TAT P+ A+ RR A + T P W R A +R +
Sbjct: 59 PVVATATPPAAAAAACRRRCAAACCPRMLPTQTPPQPVVAVVGGWGRRWAAATCWPRRRA 118
Query: 299 ARPTKPLLACPRAASPVRQAT---SVAAASTTNRTYDGPREGARAPAHDHRPAM 147
ARP P A R SP A+ S +A ST + GP A APA H+P +
Sbjct: 119 ARPRPPTAALRRCRSPPPPASGRASSSANSTPKKGESGPFGTAPAPASAHKPVI 172
>gb|AAD27584.1|AF118275_1 atrophin-related protein ARP [Homo sapiens]
Length = 995
Score = 36.2 bits (82), Expect = 0.30
Identities = 29/92 (31%), Positives = 42/92 (45%)
Frame = -3
Query: 292 PRNLYWLVREQQALSAKQLPSQQPPQPIARTMDHARVRGHPRTTTVPPCVMRLAACSTCQ 113
P L Q AL ++Q P +QP P M H + P TT +P +L A
Sbjct: 323 PHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIK---PPPTTPIP----QLPA----- 370
Query: 112 ARAGRLTPHVSGASGTAVTAHRERRPTGQPLS 17
+A + PH+SG S ++ A+ P +PLS
Sbjct: 371 PQAHKHPPHLSGPSPLSMNANLPPPPALKPLS 402
